BGIOSGA020373

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Revision as of 03:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020373| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020373, complete gene.| tag = OJ1781_...")
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Gene Name

BGIOSGA020373

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020373, complete gene.

LocusTag

OJ1781_H11.4

Ensembl Transcript ID

BGIOSGA020373-TA

Ensembl Protein ID

BGIOSGA020373-PA

Length

5245

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29513987..29519231

Sequence Coding Region

29513987..29514307,29514420..29514554,29515082..29515192,29515745..29516026,29516369..29516568
,29516718..29516949,29517512..29517625,29518106..29518294,29518881..29519231

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29513987..29519231 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29513987..29519231 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCTCCCGCCACTGCCTCCGCCTCCGCCTCGGCACCGGTCTCCCTCCTCTTCCTCTCCCTCCCGCTCTCCCCTTCCTCGTGTCGCGGCCTCCCCGCGCCACATACCCACCTCCCCCCGCGCCGCCTCGCGCTCGCGCCGGCCCGCCCTGGCGCCGCGCTGCTCTCCAGCCTCGGCGACGCGCAGGAGGAGGAGGAGTACGATGACGAGGAGGAGGAAGAGCTAGTGGTGGTGGGATACGTGAGCGGCGCGCACGGGGTTCGCGGCGACGTCCTCGTGTCGCCCCGCACCGACTTCCCCCAACTCCGCTTTGCCACGCCGGGGAAGAGATGGCTGAGGGCCCGTGCCGCTGGGAAGCAGCAGGTAAAGGAATTTGAGCTTGTTCGAGGAAGAGCTCATACCGGGAAGAAGAGTTGGATCGTCACCTTTGATGGGGTCGATTCCGTGGATGAGGCCAGGCAAATAGTTGGTTCAGCTATACTTGTGAAAGCTGGGGATAGACCAAAAATGGAGGAAGATGAAATCTATTCACTTGATCTTGTTGGCATGAGAGTTATTGTCAAGGACACGGGCAAGCTTGTTGGAACAGTTGGTCAGGTTTTCAACTTTGGAGCTGGTGATCTTCTACAGGTTATGGTTGGTGGCACTGAGGATACTGTTTCTCAGCCAAATTCAGAAAATCAAGATTCCACCCCATCTGGTGAGCATGTGTGGATTCCATTTGCTGAGGATATTGTACCTGATATTGATATGGAGAGTAGAGAAATGTGGATTACACCTCCAAAGGGGCTTCTTGAGCTCAACGCGCGTTCTGATAAGAGATCAAAGAAAGAAAGGCGTGCTATGGAATGGAAGGAAAAGAAGAGGTTACAGCGTCGTGTAATTGCAGCAAAGAAGATACTATCTGAAATGGACCAGGGTCATGTTCTGGAAGGTTTGCTATCTGGGGACAAGGTTCAGAAGGCTTCACTTGCAGAACAGATTGGGTCCATTGACTTTCAGTTGTTCCGACATGCAATGCATAGTGTTAGCAGACCAATTGGCAGCTTGTCAAAAGATGTCTTTGTCAAATCCTCTTCATCGAGGAAAAAATTGATGAGAATACCTTACGAAACCCTCTTGAACCATGAAGAGAATGCGAACTTCGCTAGTGAACTCAATGAAGGCGCTGGGATCATTCAGAAGTCGAAAGCAGCCACCATACTTATTACAAATGACTCTGATACCCTGGATGCTGAGTTTCAGGGATTGCTTAATTCTTTTAATAAGTTAATGAAGGTTGAAGAAACCCGAGGCTCTATCCCTTTTGTTATTGTTTGTCCTGCTGGTCATGTGGGGTCAGTTCAGAATTGTTTGGTAGAGAATGACTATTTTGGTTTAGACTCTCAGAAGGTATGGGTTCTGGAAGAAATGAAACTTCCGATTGTCAGTATGTCCTCTAAGCTAAACAGCAGGAAGATTCTGTTGAAGTCTCCATGGGAGATACTACAGAAGCCAGCAGGAACTGGGGTGATTTTCAGCTTGCTATCATCAAATAAAATTTTAGATACTCTAAATGAAATGGGTGTGGAGTATGTACAGATATGCAGCTTATCCAATAAGCCAAACATTGGGCATCCGTTGCTGTTTGGGGCTGTCAGCTCCTTTGGCGCGGATGCTGGCCTCATGCTTCGCAAGAGCAGCAAGGAAACAGAAGATGATTTTGATCTGATTCTTTCCATGAACCACGTAAACAAGATGTGCAGAGATGTTACTAAGCTCAGGTTCTCTGCGCAGCAGGAGCAACATGTGCACGTCGAGCATGTCGATGGCCAATGGGTCGATGTCCAACCAGAGGCAACGAACTGTCATCGCTTGCATGCAGAGGTCACTAGTGTCTTGAACTACTGCTCTCCTGACAAGGTGTGTGTCATAGAGATTGTCCAGCAATAG</cdnaseq>

Protein Sequence

<aaseq>MAPPATASASASAPVSLLFLSLPLSPSSCRGLPAPHTHLPPRRLALAPARPGAALLSSLGDAQEEEEYDDEEEEELVVVGYVSGAHGVRGDVLVSPRTDFPQLRFATPGKRWLRARAAGKQQVKEFELVRGRAHTGKKSWIVTFDGVDSVDEARQIVGSAILVKAGDRPKMEEDEIYSLDLVGMRVIVKDTGKLVGTVGQVFNFGAGDLLQVMVGGTEDTVSQPNSENQDSTPSGEHVWIPFAEDIVPDIDMESREMWITPPKGLLELNARSDKRSKKERRAMEWKEKKRLQRRVIAAKKILSEMDQGHVLEGLLSGDKVQKASLAEQIGSIDFQLFRHAMHSVSRPIGSLSKDVFVKSSSSRKKLMRIPYETLLNHEENANFASELNEGAGIIQKSKAATILITNDSDTLDAEFQGLLNSFNKLMKVEETRGSIPFVIVCPAGHVGSVQNCLVENDYFGLDSQKVWVLEEMKLPIVSMSSKLNSRKILLKSPWEILQKPAGTGVIFSLLSSNKILDTLNEMGVEYVQICSLSNKPNIGHPLLFGAVSSFGADAGLMLRKSSKETEDDFDLILSMNHVNKMCRDVTKLRFSAQQEQHVHVEHVDGQWVDVQPEATNCHRLHAEVTSVLNYCSPDKVCVIEIVQQ</aaseq>

Gene Sequence

<dnaseqindica>1..321#434..568#1096..1206#1759..2040#2383..2582#2732..2963#3526..3639#4120..4308#4895..5245#ATGGCGCCTCCCGCCACTGCCTCCGCCTCCGCCTCGGCACCGGTCTCCCTCCTCTTCCTCTCCCTCCCGCTCTCCCCTTCCTCGTGTCGCGGCCTCCCCGCGCCACATACCCACCTCCCCCCGCGCCGCCTCGCGCTCGCGCCGGCCCGCCCTGGCGCCGCGCTGCTCTCCAGCCTCGGCGACGCGCAGGAGGAGGAGGAGTACGATGACGAGGAGGAGGAAGAGCTAGTGGTGGTGGGATACGTGAGCGGCGCGCACGGGGTTCGCGGCGACGTCCTCGTGTCGCCCCGCACCGACTTCCCCCAACTCCGCTTTGCCACGGTACCCATCCCTCGTTCTCCATCATCCCGCTCCCCAATTTCGGAGCTAATATGTAATCGGGCGTTGTTTTTTGTTCGGTTGTTTGATCATCACGATCATGCCACGCTGACAGCCGGGGAAGAGATGGCTGAGGGCCCGTGCCGCTGGGAAGCAGCAGGTAAAGGAATTTGAGCTTGTTCGAGGAAGAGCTCATACCGGGAAGAAGAGTTGGATCGTCACCTTTGATGGGGTCGATTCCGTGGATGAGGTCTGGTTTTTTACTTTGATTGCATTCCTATACAGTCATTTGCTCTTAATTTCTAGGACTCGTAGCCTTAAATCAGCTTGCTATAGTTGATACTAGTTTAGAAGTGCATTGGGGTATTTGTAGGTCGTCGGAAACAAACTAAGTTGATGTTTCATCCATGCTGTATTTTTGGTCCGCACATGCGCACATACAACTTTACAACAACAATTATCGGCTGCATTGAGATATTTATAGGTCGTTGGAAATGAACTGATATAATGTTTCATCTATGCTGTACATTTTGTTCCATACATACAACATCAATTGTCGGCTTCTGGCAGATCAAGTTTACACACCATCACTGAGTATAACTGCATGATTAGTTCAGCTCAACCTAGCGCACACGAATTGTATATTATGGTCGGCATGTGTCTAGATCAGAATCCTTTTATGAATAGCATTCAGTATGTAATGTGTAACTAATGCTTACTATAAGTTGGCATATATACCTAGCTTCTGGTGTAATTCGTTTATTACTCTATTTTCAGGCCAGGCAAATAGTTGGTTCAGCTATACTTGTGAAAGCTGGGGATAGACCAAAAATGGAGGAAGATGAAATCTATTCACTTGATCTTGTTGGCATGAGAGTTATTGTCAAGGTACATATTTTCCTTTTCAAGTTCGTGATTTAGTTGTTGGTTTAAATAACAAAATGAATCTACAACGTTAGCAAAGGCATGATCCTACTATTTGGTGCCTAGGCGGTAAAACTGAAATATAGTGGTAGCTGGATGACGTGTACATGTAATACATTACTGGCTCTCTGGCTGTTTGTCTTCGACCCTGCCTTTGGATACTCAATAAATGTGCCATGTCCAACAGACTAATAATTGTGGCATTCTTTTATTATTGAGCGTATGCATTCCTGAAAATAAAACTATCTTACAAAAACGCTGCCTTATATGGGGTTTTTACCCTAATGCTGGAACTAGGAACTTTTACTCTTCAATTGCTCTGTCCAGCTTAAATAAGTTTTTTTTCCACCTACTAAAAGTAAACAACACTGGCAAAATGTGCACTGGCATGGACATAAGAACACGGTATTGATGCAATGATGCTTGTTTTCTCATTGGGCAGTTCTTCATCCAATTTCTAATAATTAATTAAAGTTGTTTTGATAATTAGTTAAAGTTGCTCTGTTTTCATCATAGGACACGGGCAAGCTTGTTGGAACAGTTGGTCAGGTTTTCAACTTTGGAGCTGGTGATCTTCTACAGGTTATGGTTGGTGGCACTGAGGATACTGTTTCTCAGCCAAATTCAGAAAATCAAGATTCCACCCCATCTGGTGAGCATGTGTGGATTCCATTTGCTGAGGATATTGTACCTGATATTGATATGGAGAGTAGAGAAATGTGGATTACACCTCCAAAGGGGCTTCTTGAGCTCAACGCGCGTTCTGATAAGAGATCAAAGAAAGAAAGGCGTGCTATGGTTAGGTCTGCATCATCCTTTTCTTGCATGTTATGTTCCATGTATAAAGCATTCTTTCGCACATAAAAGTAAAGAATATGTCAGGTCTAAAGAATTTCACGTCATTATAGAAGGGGGCCACCCCTGTTTCAGAAAATAAAAGGTTCTAAAAAACTCAAACGTTTATTTCAGCAGCTGCACAGCTTTTGCAAATATTGAATGCACATGTCACATTTTTTTTAATGAATAGATGCAGTAAACACATTGAACTCTCTTGCTTGTGGTGCTAACCAAGAACGATGCAATCATATGAACCACCTGATATTTTGCAAATAAAGCGTGACCAGATGTGAAATATCACAGGAATGGAAGGAAAAGAAGAGGTTACAGCGTCGTGTAATTGCAGCAAAGAAGATACTATCTGAAATGGACCAGGGTCATGTTCTGGAAGGTTTGCTATCTGGGGACAAGGTTCAGAAGGCTTCACTTGCAGAACAGATTGGGTCCATTGACTTTCAGTTGTTCCGACATGCAATGCATAGTGTTAGCAGACCAATTGGCAGGTGCAGACTTCTGACAACCTTTTCTGTTCTGCCTAAATCCTTTTCAAGAGAAGCTGACTTGTGCTGCAATTTTTCACTAAATAGATGTCAGTAATTTGCCTCTAGTTCTTAATCTAGCTTCCTTTTTTCGAACATGTTACTATTTGCAGCTTGTCAAAAGATGTCTTTGTCAAATCCTCTTCATCGAGGAAAAAATTGATGAGAATACCTTACGAAACCCTCTTGAACCATGAAGAGAATGCGAACTTCGCTAGTGAACTCAATGAAGGCGCTGGGATCATTCAGAAGTCGAAAGCAGCCACCATACTTATTACAAATGACTCTGATACCCTGGATGCTGAGTTTCAGGGATTGCTTAATTCTTTTAATAAGTTAATGAAGGTATGCATTTCATGATTGTTTATTGCAGTTCTTTCTGTATGGGAACTAAATATGCATGCCCAATTTGCAGTTTTATGTTTTCTCTGATTGTTCCAGTAATAAATTTATATATGCCATGCTGCCATAAGGAGAGAGAGATTGAAGATCGATTTAGTCTCAGTCTCTCTCATCGTTCATGGTACTAATCTATTTAGCTACAACAAACATTAAAATTATGACTGGTTGGTTTGTGCTTGTTTGCTTCATGTGCTTTGTTGTTAAGAGCTTTAGGTTGTGTTCTTCTCCCATTTTCCTAACCCACCTCTCTCGTTTTCCGCGCGCACACTTTTCAAACTACTAAACGGTGTGATTTATGCAAAAACTTTCTATATGAAAGTTGTTATAAAAAATCATATTAATCCATTTTTCAAAAAAAAGTTAATACTTAATTAATCATGCAATAATATGAGCTTCGTTTTGTGTGCCGGGGAGGAGGGGTTCCCAACACCTCCTGAACACAGCCTTAGACTCTATTTCATTATGAATGTTTGGAGAAATTTGATATATCTTTTGCTTGATACAGGTTGAAGAAACCCGAGGCTCTATCCCTTTTGTTATTGTTTGTCCTGCTGGTCATGTGGGGTCAGTTCAGAATTGTTTGGTAGAGAATGACTATTTTGGTTTAGACTCTCAGAAGGTAAATGTTGTCTTAAAATGGTCCTCACGTGGTTCTATGTTTTGTGTAGTGCGTAGAAAGAAGTTTCAGCCAAGATGACTAGTTGTTTCTTTTTTTATATATTATATTAGATCAGTTGAAACTTAATCTTGTTATTATTTTTCACCCATTGAACACAACTCAGTACAAAGAAATAGTTGTTTTGTGTTCCAATTTGTAAAATGTATGGAGAACCTCGAATTCGTTATGGTGGGGATAAGCTTACTTGCAATATACAGTTGTACACGTACTTTTTTTCATGCCTGCCTTCTCCAGAGTTGGCGTATCTTTTCCCCCCTTTGCAGATCCTAATAGTGCCTTATTCTTTTTCCTGAAAAATAAATGGTTTCATCATGGATTCTTTGATATTTTTAGTGATTATTTCTTTATTTATAACTTGGAATCTGGATATTACCGATTCTCCTTTTGTTTTTTCAATTTTTTTGTGGAATCCATTTGCAGGTATGGGTTCTGGAAGAAATGAAACTTCCGATTGTCAGTATGTCCTCTAAGCTAAACAGCAGGAAGATTCTGTTGAAGTCTCCATGGGAGATACTACAGAAGCCAGCAGGAACTGGGGTGATTTTCAGCTTGCTATCATCAAATAAAATTTTAGATACTCTAAATGAAATGGGTGTGGAGTATGTACAGGTAAGATCCAGTGCAGTTCACCTTCTTGTCCTGGCACTCATTTGGCATTCAGTCATTTACTTTGTTTTTTCTAATAATTCTGTTCATTATGAACTGGGAACTCCGTACACAATAGTCAAGAATGAAGAGGAACACTGTGTTATATAAAGCCATGATATAATTGTTACATTTTCATTTCGATTACCTCTTTAGAAACTTGAAGCACACCCTTTTTATGTAGCTTACCATTTGTTACTACCGCTGCCTGAAAACATATAGTCTACCAAATGCCAGACTGCCAGTGAGGCAGTGATGAGTGTAGTATACTAATAAAACAAACGAGATTTGGAGGGAGACGTCTCTCCAAACATTTTTTTAAGAAGAAATTGTGAGCGTGTTGGGGGTTAAAACCACACACCCCCTTGACACTGCACTGTGAAACACATCTCTGAGTGTAGTATACTAATGTTTCAAATCCTTCTTTCTTTTGAGTTTTGACCATGCAAGCTGGAAGGTTGCACTTCTTCCTCTTTATTTAATCCAAGTTATTTCTTGATTCTATTCCTTCATAAACCGGTACCTGAAATGTATCTTACCTGTACGGCAGATATGCAGCTTATCCAATAAGCCAAACATTGGGCATCCGTTGCTGTTTGGGGCTGTCAGCTCCTTTGGCGCGGATGCTGGCCTCATGCTTCGCAAGAGCAGCAAGGAAACAGAAGATGATTTTGATCTGATTCTTTCCATGAACCACGTAAACAAGATGTGCAGAGATGTTACTAAGCTCAGGTTCTCTGCGCAGCAGGAGCAACATGTGCACGTCGAGCATGTCGATGGCCAATGGGTCGATGTCCAACCAGAGGCAACGAACTGTCATCGCTTGCATGCAGAGGTCACTAGTGTCTTGAACTACTGCTCTCCTGACAAGGTGTGTGTCATAGAGATTGTCCAGCAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020373

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020373&oldid=49129"