BGIOSGA020374

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Revision as of 03:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020374| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020374, complete gene.| tag = OJ1781_...")
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Gene Name

BGIOSGA020374

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020374, complete gene.

LocusTag

OJ1781_H11.10

Ensembl Transcript ID

BGIOSGA020374-TA

Ensembl Protein ID

BGIOSGA020374-PA

Length

7056

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29554729..29561784

Sequence Coding Region

29554729..29554924,29556908..29556951,29557199..29557313,29557403..29557478,29557924..29558555
,29559166..29559451,29559538..29559808,29560166..29560321,29560559..29561056
,29561500..29561784

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29554729..29561784 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29554729..29561784 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCGGCGGCGGCGCGGGGGGAGGAGGAGGAGGAGGGAAGGGGGGCGCGGCGGCGGGCCCCGTCCCGGCGGCGTCGAGGAAGCTGGTGCAGAGCCTGAAGGAGATCGTGAACCGCCCGGAGGCGGAGATCTACGCGGCGCTGCGCGATTGCGGCATGGACCCCGACGAGGCGGTCAGCCGCCTCCTCTCCCAAGATACTTTTCAAGAGGTAAAGAGCAAGCGCGATAAGAAAAAAGAGGTTAAAGAGATTCCTGAGCCAAGATCTCGAGCGGCAAGTAATGCTGCCAGTCGAGGTGTAAGAGGCGGTGCAGATCGAGGCGGGCGAAACAGTTCTTTTCACTCTAGCTCCATTGACAATGTGGCTTCAAGGTCAATCTCAGGGCCTGGTATGACATCAACCAATTCCACTCAGAAGCAAACAATTCCAAGTTCCTTGGTAAACAAAAGTGTGGTTGCTGATGGACCGTCGGTACCTGCACAATCGTCATCTGGGTTTCAGCACGGTTGGTCTGGGACACCAGGTCAGTTGTCAATGGCCGATATTGTGAAAATGGGCAGGCCTCAGGTAAAGCAGTCCTCTAGCAAGCCTGCGGTTACTGCAGACAAAGGATATACTGGACAATACCCATCTTTGCCCAGTACTGTAAACCAGAATTTGAAACAATCTGCTAGCACAGTTTCACCAACAAATCCTGACCAGGGGTTACATTCTGCTCAAGATTCTATTCATCCCAAGGATCACAACCACTCAGCAGCTGTCAACAAGCAGGCATATGATAATGATTGGCTTCCACAGGACGAGCCACCACCAGGAAATCAATCAGCCTTGCCTGAGACATCCGGTGACCAATCATTATATGAGTCATCGCTACAGTCATCTACACTGGTTGCTGGTGTGATTAACCCCCATGAAAATTCTCATTTGGATGAGAACAGATCAGCTGCATTTTCTTCCGAGAGACACTTGGAACATCATGGAGGCGATTCTGAATATGATGATGGACTGTTGCAAGAATCGAGTACCTATCTGCCTCAGAAGAATTCTCATGCAGAAGATGAAGTTGAGGGCTCCAATTCTGATGTAGCGTTAGCCACTGAAAACTTCCAGGGTCTAAGCCTACATAATGAAGAGTTAGTTGCAACAAAATTAGCTGAAGATAACCCTGCAGTTATAATTCCTGATCACCTGCAAGTTACCGGCTCAGACTGTGTCACTTTGAGCTTTGGCAGTTTTGAATCTGGAGCATTTTCTGGGCTTCTCCCTGTTCCATCAAGGAGCGCTGATGATAACAATGTGGAGTTGCCTGTTATAGAGGAATCTGTACCTCTAGATCAAATTGATTCAAGAGATCAAGACTATTATGATAGTGCCGCAGTTAATTCGTCAGGAAATGAGAACCTTGATACTATCATAGGAACAAACATGGAGAACATTGATGTACCTTCTGTTTCACAGCCTGATGTCCTGAGACAGGAAGTGCTTGATCATTCCGGTCTTCAATATAACCTACCATCTGATTCAAGTGCTGCATATGCAAACACTACACAGCCAAGTACAATGGAGTCCTCACAAGGAAACAACCAGGCGCACACTCTTTCCCATCTTTCAAACTTACTGCAAGCAAATTCATTACACAACAGCCTATTGGGGTCAAACATTGCACCTCTCCGGGACTTGGACTTCAGTTTATCACCTTTGCTAGCAGCACAATCAATGACAAAATATAACTCAGCTGCACCAACTACTACTGGACCAGCAATCTCCATGCAAGAGACTCTGAAGCCAGGAGTTTTCTCCAACGCTCAATCTACCCAAAATCTTCCAAGTACTAGTATAGCAACGGGGCCTCCTCTCCCTCAGCAATTAGTCCACCCTTACTCTCAGCCTACTGTACCACTGGCGCCTTTTGCGAATATGATTGGTTATCCGTATTTGGCACAGAACTACCCTGCTGCTTACCTACCATCAGCTGCCTTCCAGCAAGCATACTCGAGTAATGGACCATTCCATCAGTCTGCTGCTGCTGCTGTACCAGGAGCTATGAAGTACAATATGAATGTGCCGCAATTCAAGAACAACCTATCGGCTACAAGCTTACAACAGCAACCTTCTTCAGTGATCTCTGGTTATGGAGGATTTGGAAGCTCTAGTAATCTTCCTGGAAATTTCACTCTTAATCAGAATGCTGCCTCTGCATCAACAAATCTTGGGTTTGACGAAGCATTGAGCACGCCATACAAAGATCCCAGCCAATATATGGCCCTCCAGCAGGGTGACAATTCTGCAATGTGGCTTCATGGTGCTGGTTCAAGAGCAACGTCGGCGCTTCCACCGAGTCACTTCTATGGCTTCCAGGGACAGAGTCAGCAGGGTGGCTTTCGTCAGGCGCAGCAACCGCAGCAGCACTCGCAATTCGGTGGCCATGGGTATCCAGCTTTCTACCATTCTCAAAGCCAAGAGCACCACCAGAACCCGGCCGAGGGAGGCCTGAACGGTTTCCAGAATGCCCAATCACAGCCGTCTCACCAGGGGTGGCAGCAGCACACCGGCTACTGA</cdnaseq>

Protein Sequence

<aaseq>MTGGGAGGGGGGGKGGAAAGPVPAASRKLVQSLKEIVNRPEAEIYAALRDCGMDPDEAVSRLLSQDTFQEVKSKRDKKKEVKEIPEPRSRAASNAASRGVRGGADRGGRNSSFHSSSIDNVASRSISGPGMTSTNSTQKQTIPSSLVNKSVVADGPSVPAQSSSGFQHGWSGTPGQLSMADIVKMGRPQVKQSSSKPAVTADKGYTGQYPSLPSTVNQNLKQSASTVSPTNPDQGLHSAQDSIHPKDHNHSAAVNKQAYDNDWLPQDEPPPGNQSALPETSGDQSLYESSLQSSTLVAGVINPHENSHLDENRSAAFSSERHLEHHGGDSEYDDGLLQESSTYLPQKNSHAEDEVEGSNSDVALATENFQGLSLHNEELVATKLAEDNPAVIIPDHLQVTGSDCVTLSFGSFESGAFSGLLPVPSRSADDNNVELPVIEESVPLDQIDSRDQDYYDSAAVNSSGNENLDTIIGTNMENIDVPSVSQPDVLRQEVLDHSGLQYNLPSDSSAAYANTTQPSTMESSQGNNQAHTLSHLSNLLQANSLHNSLLGSNIAPLRDLDFSLSPLLAAQSMTKYNSAAPTTTGPAISMQETLKPGVFSNAQSTQNLPSTSIATGPPLPQQLVHPYSQPTVPLAPFANMIGYPYLAQNYPAAYLPSAAFQQAYSSNGPFHQSAAAAVPGAMKYNMNVPQFKNNLSATSLQQQPSSVISGYGGFGSSSNLPGNFTLNQNAASASTNLGFDEALSTPYKDPSQYMALQQGDNSAMWLHGAGSRATSALPPSHFYGFQGQSQQGGFRQAQQPQQHSQFGGHGYPAFYHSQSQEHHQNPAEGGLNGFQNAQSQPSHQGWQQHTGY</aaseq>

Gene Sequence

<dnaseqindica>1..196#2180..2223#2471..2585#2675..2750#3196..3827#4438..4723#4810..5080#5438..5593#5831..6328#6772..7056#ATGACCGGCGGCGGCGCGGGGGGAGGAGGAGGAGGAGGGAAGGGGGGCGCGGCGGCGGGCCCCGTCCCGGCGGCGTCGAGGAAGCTGGTGCAGAGCCTGAAGGAGATCGTGAACCGCCCGGAGGCGGAGATCTACGCGGCGCTGCGCGATTGCGGCATGGACCCCGACGAGGCGGTCAGCCGCCTCCTCTCCCAAGGTCTCCGCCCCCTCTCTCTCTCGCGCGCCCTCTCCCACCCCGCGATTTCGCGCTTGTTTCGATGCCCCCTCGCGGATTCTTCCCTGATGCGCCCGCGCCTCGAGTTCTCGTCGCCGTTAGGGTTCTAGAAGATTCTTACAACCGCGTGCCCCTCTTTCCGATTGGGGCGATTCGTTACTTGCCGCGCTCTGAGCGTGCGCACCACGGATGGGATGAGTGGGAAGGATGCGCCTATTATTTTTTCTTCATGAGAGTCCTGCCGATTTGTCATGATTTATCCGTTTATGATTGTAGCATTTGATAGATTTGGCCCTTTGGGGTTCGTTGAATCCGTTGTACATTTGTAGGGTTTCTGTTTAGGGTTCCTGCTAAATGTTAACAGTGGCTAGCGTTTTCCTATTCTGGAGTAGGGGTAAGGTCGATCCTGCTTGTTATTTATAGGAATCGATCTCCTTTTGTTTCTTGTCTTTCGGTTGTAGGAAGGAGTTGAGATTTTTGGGAGGAAAGTCAAACAGATGAATACTGAACTTTTTTCTGAACTTTGAAAGAAACAGCTATATCTTTGGTAGGATTATGTAGGATAGAAGGAGTGGAACGAGTTCATGACTTGAGATTTGCTGTTTGGATCAATTTACTGACCTGTCTAGGTAAATACACCATGCTAAAGTTAGTTGTTGGATTGGAAAAGAGATGGTTGTGGTAATTTTAGTTACCAGGCTTGAAAAGAGTGGAATCTTTAGATTGGGAAAGGAGATGGACCCTCTGGCTTCTCATATTGGCTATGTTTGAAAAGTGGGAACACATTACTGTTGCTTCCAAAATGGCTATTTGCATTACAATACTTGTGAAATTAGGACTTGCTGTTTCTGCAGGGTGGTGGTTGAGTTTTGTGTCCATTCTCGGGGACAGTTCGATAGGTGTTTTAGTGCCTTCGTTTTTGCTCTTGTCGCTCTTTCCTGTGTCATATCTTTTCATAATTTATAAAGAAGAATGTGTGCATCTCTGATTGTTCTATAGAAACATTCCATCATCAGTTTTTAGGATGTGTTGACAATAATAACATATGGACATGGGGGGAAGTGTAACTATCATATGTATATGATGAAAGGGGCTATTAGATGATATTTACTGAATTTCATTGGTCATATAGTGGTAGTAAGCAAGAAACTCAGGTCCACCTTTAGCTTATTTATATCGTAGTGTGCCATTTGAACTCGTGGCTTTATTTCTGTAGGATAAGTTTCTGAGCTTGCAGTGATTTGTGGCATTAGTCTTGGGCTCTTCTCTTTGCAAGGAGGCTTTTTATTAATTGAAACTCCATGCATTTTCTTTGATCTGGGAAGTTGAAGAAAGATTAACTGTCAGACATAGTTGGTAGCCTATCTATTCCATCTATGGTTTTTCCATGGCATTTTTCTTGGTTTGACTTTTACAACATGTTACAAGAGGCATTGTGTATTTGTGTTATAACTTTCCTGAACACTGTTAGTCTCCTACTCCCCTTGACTCCTTGGTAATCTATTGCTGCTAAGTTTATGAGGGATGATGGATGAGCCAGGAGTGGGAATTGCCACCTTAATATACCTCATCTGTGTAGCATGTGAAAGTCATAATACAGCTTCCTGAAATGGCATAGAGGTGTCATTTGGGTTTTATGACTACTTTCTTGTTCAGAGTTTATATGCTGTACTGTTACCACATATTGAATATCTTATTTTCTGCACACATACTTAATGAATGTTCGAGGAGGCAAGTGTTAGGTTGTTTTGTCATCCTTTTCTAAATTTCTTCTCATATTGTCATGCCAATTTTATTTTTGTTCAACATTATTTTTTGTATGCCTTTGTTGATCATATCATCCAGTTATTTTTAGTCAGTTTAAACTGTGATCTGACAATGCACCCCAAGATAAATCAGTTATATTTATTTCAGTTGCTCTTGCAGTTATGTTAAAATTGATATCTTATGTACCGCTTTTTTCAGATACTTTTCAAGAGGTAAAGAGCAAGCGCGATAAGAAAAAAGAGGTGTGCCCCACATCTTGCATTGCTCGCCTTATTTTTTGACCAGCACTCAGCTTTGATTCGGTTGCCCTATATTTATTTTCATCATCAATAGCATAAAGAAAACATTTTATTCATGTAACAATTAGTTTTTGTCTGATTCCCCTGCGTCTAAATTAAGCATATGGAACTAATCTTTTGGAGTTTTGGTTATTTTGAAAATTCTCTAGCCTTGATGAACTTACCATTATAGTCATGGGCACTTTCATAGGTTAAAGAGATTCCTGAGCCAAGATCTCGAGCGGCAAGTAATGCTGCCAGTCGAGGTGTAAGAGGCGGTGCAGATCGAGGCGGGCGAAACAGTTCTTTTCACTCTAGCTCCATTGGTAATAGGAAAAACCACCATCAGTATCTTCAAGGTTATCATTGGTTGTAATTTCTTTTCACATTTTTTTTTGTTCATTTCAATATTCAGACAATGTGGCTTCAAGGTCAATCTCAGGGCCTGGTATGACATCAACCAATTCCACTCAGAAGCAAACAATTCCAAGGTAAGAGAGCTTCCCTTTTGTTGCATATATTTTAAGAAGGGCTTGTACAGCAGGTCTGCCTTTTTAGAAGGCATACCATTTTTCTAGTTGTCTTTTCTCTGGAGCCTTTATCTGTTTGCATTTGATATGATCCTTTTGCATTATTGTTGATTCTGCTGCTATGTGTAAAATTTCATGCAAACAGCATAGGTTTTTTTACAAACAATTCTCTTGTTAGATGACTATGACTCAATAGTTCATATAGTTACATATAATTGTTATCTGAGACTATCGTTTGTAATGTTGTGTTAGATTCAAATGAACCATATGGAATATGGATGAACTTGGATGATGCATCCCACATGAAAGTTAATGCATACTACAAATTTTATCTGATGCGTTGATGATTTCATAACGCCTTCTTATTTCACTCTGGGGAATTCATGCTCTTTTTTATCTGCTGTAGTTCCTTGGTAAACAAAAGTGTGGTTGCTGATGGACCGTCGGTACCTGCACAATCGTCATCTGGGTTTCAGCACGGTTGGTCTGGGACACCAGGTCAGTTGTCAATGGCCGATATTGTGAAAATGGGCAGGCCTCAGGTAAAGCAGTCCTCTAGCAAGCCTGCGGTTACTGCAGACAAAGGATATACTGGACAATACCCATCTTTGCCCAGTACTGTAAACCAGAATTTGAAACAATCTGCTAGCACAGTTTCACCAACAAATCCTGACCAGGGGTTACATTCTGCTCAAGATTCTATTCATCCCAAGGATCACAACCACTCAGCAGCTGTCAACAAGCAGGCATATGATAATGATTGGCTTCCACAGGACGAGCCACCACCAGGAAATCAATCAGCCTTGCCTGAGACATCCGGTGACCAATCATTATATGAGTCATCGCTACAGTCATCTACACTGGTTGCTGGTGTGATTAACCCCCATGAAAATTCTCATTTGGATGAGAACAGATCAGCTGCATTTTCTTCCGAGAGACACTTGGAACATCATGGAGGCGATTCTGAATATGATGATGGACTGTTGCAAGAATCGAGTACCTATCTGCCTCAGAAGAATTCTCATGCAGAAGATGAAGGTGAGTGTAGATATGAGTTTATGAATTTGCTTAACTTTAGCATCTCCATATTCTGTCCTGCTGGAATAACCTGGATCTTTGGTGTTATGAGCTTATTGCATTCGTTAGCATTGGAAAAGGCAGCAGACAATTTATTAGTAAATACTTTTGGTATTCCTTCCAGAATGCCATTGATACTTGCGTAGGTGTGAGATGCAACTTACACCCTGTAATTGACGTTATCAATTCCTATGTTAATCTGGGTATGTTGAATGCATCTCTGTTATGATAGGGTTTAGGGAGGCAGTTGTTGCAACTGGCAAGTAATCAACTTTACTGAACAAAATTGATATATGATGGTTCCTGCATCTTTTTAGTAGTAGAATACCAGTCTTCAGATTTCTGATGTCATGCTGTTACTTTCTTGATGAATAATGAACTTTAGACTGTCGTGTTATCCAGTATTAAAAGTTCTGTAAGGCAACAACAGGTCATGCAGTTTATTGTGAATAGGTTTTACAGCATATGTTCCTTTCTGGTTGCTTGTTCTTTTCCTGGGCGCTGTTGCATTCTGGCTTTGGCTGTGCATGACCTGCATGTGAATACTGATTTCTTTTTACTATTCTTGCAGTTGAGGGCTCCAATTCTGATGTAGCGTTAGCCACTGAAAACTTCCAGGGTCTAAGCCTACATAATGAAGAGTTAGTTGCAACAAAATTAGCTGAAGATAACCCTGCAGTTATAATTCCTGATCACCTGCAAGTTACCGGCTCAGACTGTGTCACTTTGAGCTTTGGCAGTTTTGAATCTGGAGCATTTTCTGGGCTTCTCCCTGTTCCATCAAGGAGCGCTGATGATAACAATGTGGAGTTGCCTGTTATAGAGGAATCTGTACCTCTAGATCAAATTGATTCAAGGTTAATTAAGTTTGTTCCTGCCGTCTTTATTTCACTCCACATATTGCTTGTGACATGACTGGAATGCCATTTTTTTAATCTTGCAGAGATCAAGACTATTATGATAGTGCCGCAGTTAATTCGTCAGGAAATGAGAACCTTGATACTATCATAGGAACAAACATGGAGAACATTGATGTACCTTCTGTTTCACAGCCTGATGTCCTGAGACAGGAAGTGCTTGATCATTCCGGTCTTCAATATAACCTACCATCTGATTCAAGTGCTGCATATGCAAACACTACACAGCCAAGTACAATGGAGTCCTCACAAGGAAACAACCAGGCGCACACTCTTTCCCATCTTTCAAACTTACTGGTAAATTGTTTTCTTTTTCCTATAATCTTCACTTTTCATCATTCATGCTGAATTGCTAACAGTACTAAGTAGCTTTAGCCAAACTATGATCTTGCTACATACAGTAAGATAACTAGTTTTACCTTGATTGGAAAAGAGCCAAATAAAAAGGTGCCATATAGACCCATTCTTTTGCTCATAACTCTTGTCTCAAGATATTGACCGCAGATGTAAATCATTGCTTCATTCTGGAATGTCCAGAATAACATTGGGAGCTGGTCTTTCTGGATACCAGTTTTTGTCTTCTGCATATGCATGTTATTCAAGTCAGCTAATTGTGCTCCTGCATAATTCTTATTGAACTCGTTTATTCCCCAGCAAGCAAATTCATTACACAACAGCCTATTGGGGTCAAACATTGCACCTCTCCGGGACTTGGACTTCAGTTTATCACCTTTGCTAGCAGCACAATCAATGACAAAATATAACTCAGCTGCACCAACTACTACTGGACCAGCAATCTCCATGCAAGAGGTAATTTAACTACGCTGGTTCACTTTCTCATGGTGTTTTCTCTGGATTCATATTTCATAGAAGTATAACTTTAGGAAGAAAAAGGCTCCACATCCTTTCTTTATTTGAAAGATGAATTTACAAGGGTGTGATGGTGTTGGAATTTTTTATTTTGTGTGCATATACAGTTAATCATTCAGCAACAAGTAATCTCTAGTTCTCTAATTTTCTTCACACACATGTACATATTTGTTTCAGACTCTGAAGCCAGGAGTTTTCTCCAACGCTCAATCTACCCAAAATCTTCCAAGTACTAGTATAGCAACGGGGCCTCCTCTCCCTCAGCAATTAGTCCACCCTTACTCTCAGCCTACTGTACCACTGGCGCCTTTTGCGAATATGATTGGTTATCCGTATTTGGCACAGAACTACCCTGCTGCTTACCTACCATCAGCTGCCTTCCAGCAAGCATACTCGAGTAATGGACCATTCCATCAGTCTGCTGCTGCTGCTGTACCAGGAGCTATGAAGTACAATATGAATGTGCCGCAATTCAAGAACAACCTATCGGCTACAAGCTTACAACAGCAACCTTCTTCAGTGATCTCTGGTTATGGAGGATTTGGAAGCTCTAGTAATCTTCCTGGAAATTTCACTCTTAATCAGAATGCTGCCTCTGCATCAACAAATCTTGGGTTTGACGAAGCATTGAGCACGCCATACAAAGATCCCAGCCAATATATGGCCCTCCAGCAGGTAACAATTGCAAGCAGCCCTTGTGTTTCTTTGGTAATTTATATGCTATATAATAATTCTGATAGGCACGGCTCGGTTCGAAGGTTTTGGATGAGTGCTAGGCTTACCGGAAAAAACACTTAATTATCATATAATTAATTAAGTACTCCATTTATTATTACAAATTTGAAAAATGGATTTATTTGTATTTTCTAAGAAACTTCTGTATAGAATATGCTTTTTCAAAAATCATACTCCCTCCATTTCATATTACAAGTTACTTTGGGTTTGTTCTACGTCAAACCTATTCAAGTTTGACCAAGTTTATAGAATAATATAGAAACATTTCTTACACATATACTATTAAAAAACAATCAATGATGGATTTAATGAAAGTAGTAGTAGCTATATAATCTGAAAAGAATGGGACATTAGTCACAAGTTACTTTGGGTATTCCTTTCAGGGTGACAATTCTGCAATGTGGCTTCATGGTGCTGGTTCAAGAGCAACGTCGGCGCTTCCACCGAGTCACTTCTATGGCTTCCAGGGACAGAGTCAGCAGGGTGGCTTTCGTCAGGCGCAGCAACCGCAGCAGCACTCGCAATTCGGTGGCCATGGGTATCCAGCTTTCTACCATTCTCAAAGCCAAGAGCACCACCAGAACCCGGCCGAGGGAGGCCTGAACGGTTTCCAGAATGCCCAATCACAGCCGTCTCACCAGGGGTGGCAGCAGCACACCGGCTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020374