Os12g0107700

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Revision as of 10:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0107700| Description = Protein kinase-like domain containing protein| Version = NM_001072479.2 GI:297612513 GeneID:4351275| Length = 2983 b...")
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Gene Name

Os12g0107700

Description

Protein kinase-like domain containing protein

Version

NM_001072479.2 GI:297612513 GeneID:4351275

Length

2983 bp

Definition

Oryza sativa Japonica Group Os12g0107700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:417325..420307

Sequence Coding Region

417325..419068,419361..419428,419822..420307

Expression

GEO Profiles:Os12g0107700

Genome Context

<gbrowseImage1> name=NC_008405:417325..420307 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:417325..420307 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcagaccattccccgccaccgcccaccatcgctgcacacttctcctcctccttactgtaacactcctcccctcgctcgctgccgccgccgccgcccaccaccaccacctccacgaccacgccgcaggcgacggcgtcgtcatcagccaggcggattaccagggcctacaggccatcaagcacgacctcaccgacccctacgccttcctccgctcctggaacgacaccggcctcggcgcctgctccggcgcatgggtcggcatcaagtgcgtccagggcaaggtcgtcgccatcaccctcccatggcgcggcctcgccggcactctctccgagcgcatcggccagctcacccagctccgccgcctcagcctccacgacaacgccatctccggccccatccccacctccctcggcttcctccccgacctccgcggcgtctacctcttcaacaaccgcttctccggcgccgttcccgcttccattggcaactgcgtcgcgctccaggcgtttgatgccagcaacaacctcctcaccggcgccattcctccttccctcgccaactccaccaagctcatgcgcctcaacctcagccacaacaccatctccggcgacatcccatccgagctcgccgcctcgccctcgctcgtcttcctctccctctcgcacaacaagctgtccggccacatcccagacaccttcgctggctccagggcgccctcctcctcctcgctcaaggaatccatcaccgggacctacaacctcgccgtcctcgagctctcgcacaattcgctcgatggccagataccgcagtcactcgccggcctccagaagctgcaggtgatggacctctccggcaacaggctcaacggcaccatccccgacaggctcggctcgctcgccgacctcaagacgctcgacctctccggcaacgccctcaccggcgagatcccggccagcctgtccaacctcaccaccactctccaagcattcaatgtctccaacaacaacctctccggccaagtgccagcctcgctcgcgcagaaattcgggccttccgccttcgccggaaacatccagctctgcggctactctgtatccgtgccctgcccggcgtcgccgtctccggcgccatctgcgccagcatcaccagtgcaaggggtggagaccacaggacgccaccggaagttcacgaccaaggagctcgcgctgatcatcgccggaatcgtggtcggcatcctgctcttgctggcgctctgctgcctgctgctctgtttcttgacgaagaagaggtccggaagcggcgggaagcagacgacgagcagcaaggcagccggtggcggcgccggaggcgcggcggggggcgggcgaggcgagaagccggggtcgggggcggcggaggtggagtcggggggagaggtgggagggaagctggtgcacttcgacgggccgatggcgttcacggcggacgacctgctgtgcgcgacggcggagataatggggaagagcacgtacgggacggtgtacaaggcgacgctggaggacggcagcctcgtggcggtgaagcggctgagggagaagatcaccaagggacacaaggacttcgagtcagaggcggcggtgctcggcaagatccgccaccccaacctgctgcctctcagggcctactacctcggacccaagggcgagaagctcctcgtcctcgacttcatgcccaatggcagcctctcccagttcctccacgagattgagcattacacgccttctgaaaattttggacagcgctacatgtcttcatggtcaatgcaaaaaatcgccgacttcggcctctcccgcctcatgacaactgctgccaactccaacgtcctcgccgccgccggcgccctcggctaccgcgcccccgagctgtccaagctcaagaaggccagtgccaagaccgacgtgtacagcctcggcgtcatcatcctcgagctcctcaccggcaaatcccccgccgagaccaccaacggcatggacctgccgcagtgggtggcgtccattgtcaaggaggagtggaccagcgaggtgttcgacctcgagctgatgcgcgacggcgacaatgggcccgcgggcgacgagctcgtggacacgctgaagctggcgctgcactgcgtggaccagtcgccgtcggtgagacctgatgcccgggaggtgctccggcagctcgagcagatcaggccggggccggagggcggcgccgggccgagcgacgaaggtggcgcagggcatgtggctgctgcttctgcaggcaatgagtag</cdnaseq>

Protein Sequence

<aaseq>MLRPFPATAHHRCTLLLLLTVTLLPSLAAAAAAHHHHLHDHAAG DGVVISQADYQGLQAIKHDLTDPYAFLRSWNDTGLGACSGAWVGIKCVQGKVVAITLP WRGLAGTLSERIGQLTQLRRLSLHDNAISGPIPTSLGFLPDLRGVYLFNNRFSGAVPA SIGNCVALQAFDASNNLLTGAIPPSLANSTKLMRLNLSHNTISGDIPSELAASPSLVF LSLSHNKLSGHIPDTFAGSRAPSSSSLKESITGTYNLAVLELSHNSLDGQIPQSLAGL QKLQVMDLSGNRLNGTIPDRLGSLADLKTLDLSGNALTGEIPASLSNLTTTLQAFNVS NNNLSGQVPASLAQKFGPSAFAGNIQLCGYSVSVPCPASPSPAPSAPASPVQGVETTG RHRKFTTKELALIIAGIVVGILLLLALCCLLLCFLTKKRSGSGGKQTTSSKAAGGGAG GAAGGGRGEKPGSGAAEVESGGEVGGKLVHFDGPMAFTADDLLCATAEIMGKSTYGTV YKATLEDGSLVAVKRLREKITKGHKDFESEAAVLGKIRHPNLLPLRAYYLGPKGEKLL VLDFMPNGSLSQFLHEIEHYTPSENFGQRYMSSWSMQKIADFGLSRLMTTAANSNVLA AAGALGYRAPELSKLKKASAKTDVYSLGVIILELLTGKSPAETTNGMDLPQWVASIVK EEWTSEVFDLELMRDGDNGPAGDELVDTLKLALHCVDQSPSVRPDAREVLRQLEQIRP GPEGGAGPSDEGGAGHVAAASAGNE</aaseq>

Gene Sequence

<dnaseqindica>1..1744#2037..2104#2498..2983#atgctcagaccattccccgccaccgcccaccatcgctgcacacttctcctcctccttactgtaacactcctcccctcgctcgctgccgccgccgccgcccaccaccaccacctccacgaccacgccgcaggcgacggcgtcgtcatcagccaggcggattaccagggcctacaggccatcaagcacgacctcaccgacccctacgccttcctccgctcctggaacgacaccggcctcggcgcctgctccggcgcatgggtcggcatcaagtgcgtccagggcaaggtcgtcgccatcaccctcccatggcgcggcctcgccggcactctctccgagcgcatcggccagctcacccagctccgccgcctcagcctccacgacaacgccatctccggccccatccccacctccctcggcttcctccccgacctccgcggcgtctacctcttcaacaaccgcttctccggcgccgttcccgcttccattggcaactgcgtcgcgctccaggcgtttgatgccagcaacaacctcctcaccggcgccattcctccttccctcgccaactccaccaagctcatgcgcctcaacctcagccacaacaccatctccggcgacatcccatccgagctcgccgcctcgccctcgctcgtcttcctctccctctcgcacaacaagctgtccggccacatcccagacaccttcgctggctccagggcgccctcctcctcctcgctcaaggaatccatcaccgggacctacaacctcgccgtcctcgagctctcgcacaattcgctcgatggccagataccgcagtcactcgccggcctccagaagctgcaggtgatggacctctccggcaacaggctcaacggcaccatccccgacaggctcggctcgctcgccgacctcaagacgctcgacctctccggcaacgccctcaccggcgagatcccggccagcctgtccaacctcaccaccactctccaagcattcaatgtctccaacaacaacctctccggccaagtgccagcctcgctcgcgcagaaattcgggccttccgccttcgccggaaacatccagctctgcggctactctgtatccgtgccctgcccggcgtcgccgtctccggcgccatctgcgccagcatcaccagtgcaaggggtggagaccacaggacgccaccggaagttcacgaccaaggagctcgcgctgatcatcgccggaatcgtggtcggcatcctgctcttgctggcgctctgctgcctgctgctctgtttcttgacgaagaagaggtccggaagcggcgggaagcagacgacgagcagcaaggcagccggtggcggcgccggaggcgcggcggggggcgggcgaggcgagaagccggggtcgggggcggcggaggtggagtcggggggagaggtgggagggaagctggtgcacttcgacgggccgatggcgttcacggcggacgacctgctgtgcgcgacggcggagataatggggaagagcacgtacgggacggtgtacaaggcgacgctggaggacggcagcctcgtggcggtgaagcggctgagggagaagatcaccaagggacacaaggacttcgagtcagaggcggcggtgctcggcaagatccgccaccccaacctgctgcctctcagggcctactacctcggacccaagggcgagaagctcctcgtcctcgacttcatgcccaatggcagcctctcccagttcctccacggtcagtactcactcactcactactcttcttcttgtgcatttgatcttgatactattaattaggaagacaatgcaattgataaactgtatgcattctaaagcttttacttctgctttcaactgaaactactctgaacatttgagaaaacgttgtagtctgaacatttgcaaattctggaagtgctaacactgattcagctgaaatcaagtagatttgatacatctgaaaattttgtacagtgctgagtaccttttttatttagcataacaatgagcatcccatgccaatttagagattgagcattacacgccttctgaaaattttggacagcgctacatgtcttcatggtcaatgcaaaaagttcagtaaaagagtgtcttgttcagttaaacaagttaacatattccctatgtagttttgaggctaatatgtggactattggtgaactaaatgacaggcttttgttttagtagcactgttttatcaacattattcagctttctggctctgaaatttcatcctgatgaactgaaaatctgcataactctgacacggtgacactaacatttcgtcctgatggcataacgtgaatgtgcagctcgcgcgcccaacactccgatcagctgggagacgcggatgacgatcgccaagggcacagcccgtggccttgctttcctccacgacgacatgaccatcgtccacggcaacctcaccgccagcaatgtcctcctcgacgaccactccaaccccaagatcgccgacttcggcctctcccgcctcatgacaactgctgccaactccaacgtcctcgccgccgccggcgccctcggctaccgcgcccccgagctgtccaagctcaagaaggccagtgccaagaccgacgtgtacagcctcggcgtcatcatcctcgagctcctcaccggcaaatcccccgccgagaccaccaacggcatggacctgccgcagtgggtggcgtccattgtcaaggaggagtggaccagcgaggtgttcgacctcgagctgatgcgcgacggcgacaatgggcccgcgggcgacgagctcgtggacacgctgaagctggcgctgcactgcgtggaccagtcgccgtcggtgagacctgatgcccgggaggtgctccggcagctcgagcagatcaggccggggccggagggcggcgccgggccgagcgacgaaggtggcgcagggcatgtggctgctgcttctgcaggcaatgagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0107700, RefSeq:Os12g0107700