BGIOSGA020389

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Revision as of 03:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020389| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020389, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA020389

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020389, complete gene.

LocusTag

OSJNBA0040E06.7

Ensembl Transcript ID

BGIOSGA020389-TA

Ensembl Protein ID

BGIOSGA020389-PA

Length

3491

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29674524..29678014

Sequence Coding Region

29674524..29674583,29675187..29675231,29675320..29675412,29675492..29675575,29676138..29676320
,29676423..29676465,29676860..29677080,29677249..29677326,29677593..29677718
,29677805..29678014

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29674524..29678014 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29674524..29678014 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCATGATGAAGCTGTTGCTACACAAAAGATTGGGAAAACAACCTCCCCTCCTAAGGATCAACCAACTCCATGTCCATTTCCTGATTGGTCCGCTGTTCAGGCATATTATGGCCCTGGTGTCTTACCACCGACATATTTTGCCCCAGCAATAGCTTCAGGCCATGCTCCTCCACCATATATGTGGGGTCCTCAGCCTATAATGCCACCCCCTTTTGGGACCCCGTATGCTGCGATGTACCCACACGGTGGAGCTTATCCACACCCTCTTATGCCCATGATGGCAAATCCATTGAGCATGGAACCAGCCAAGTCTGCAAGCAGTAAGGAAAAAGGCTCCAACAAGAAACTTAAGGAAGTTGATGGGGCTGCAGTATCCACTGGGAGTGGTGACAGTAAAAAAACAATGACGTCTAGTGGGGATTACAGTGCAGAAGGCTCTAGTGATGTAAATGATCTAAAGGTGGGCAAGACTGGCAGGAAACGGAGATTGGATGATGGAGCTGGTGCTGAAACATCAGCAGCTGCAAAGATGGAAAATGCTTTACCTCCCAGCCATATATTGGGAAGTACTGCGGTTTTGCCAAATCACAGCTTTCCAGCTCAAGTAATTAGGCCCAGTGCTACTAATGTTGCTAATTCGAGGGCATTGGGCACACCAATATCTCCACCGCCTGGTGTGATTGTTCCAAGTCATACAGGAGTATCAACGGAATTACTGATCAAGGATGAAAGGGAATTAAAGCGTGAAAAGAGGAAACAATCAAATAGGGAATCCGCCAGACGATCAAGGCTGAGAAAGCAGGCTGAAACAGAGGATCTGGCTACACAAGTAGAATCACTTGCAGCAGAGAACACGTCACTTAGATCTGAAATCAGTAGGCTATCAGAAAGCTCCGAGAAGCTCAGGCTGGAGAATTCGGCTCTAATGGGGAAGCTTAAGGATCCTGCAGCATCGACCCAGGCAGAAACATCTCTGCAGAAAACCACCACAGCCTCCTCTCCTCGCGTCGTGGAGAACTTTTTGTCAATGATCGACAACACGAACAAGACGAGTGTCAGGCACACAGAGCATGCTGAACCCAAGCTTCGACAACTCCTCGGCTCCGGCCCGGCCACTGATGTTGTTGCTGCAAGCTAA</cdnaseq>

Protein Sequence

<aaseq>MAHDEAVATQKIGKTTSPPKDQPTPCPFPDWSAVQAYYGPGVLPPTYFAPAIASGHAPPPYMWGPQPIMPPPFGTPYAAMYPHGGAYPHPLMPMMANPLSMEPAKSASSKEKGSNKKLKEVDGAAVSTGSGDSKKTMTSSGDYSAEGSSDVNDLKVGKTGRKRRLDDGAGAETSAAAKMENALPPSHILGSTAVLPNHSFPAQVIRPSATNVANSRALGTPISPPPGVIVPSHTGVSTELLIKDERELKREKRKQSNRESARRSRLRKQAETEDLATQVESLAAENTSLRSEISRLSESSEKLRLENSALMGKLKDPAASTQAETSLQKTTTASSPRVVENFLSMIDNTNKTSVRHTEHAEPKLRQLLGSGPATDVVAAS</aaseq>

Gene Sequence

<dnaseqindica>1..60#664..708#797..889#969..1052#1615..1797#1900..1942#2337..2557#2726..2803#3070..3195#3282..3491#ATGGCTCATGATGAAGCTGTTGCTACACAAAAGATTGGGAAAACAACCTCCCCTCCTAAGGTAAGAATACCTGTTTTAGTTGTAGTTGTACTGACTACTGAGATATTCCTTGTGATCTGTTATGTTATATCTTCTTTGCTGTGAATTGAAATTAGTTGTACTGTTGTCGAAAACAGTGGCATGACCAAAAGCCCCAGATCATGATCAATGTATATATAACTCGTCTCTTTTTCCTTCACTCTTTTTTGCTTTCCTTTATGTACCTCTATCTCTGTCTCTCTTCTCTCTAACCTTAAACTTGTAACCTGTAAACCTCATTTCTATTAATGAAATGACTATAAGGTAGAGCATGCTCTACCTTCTTGCGTCAAAAAAAAAAAAACTAGTCTCTTACCGCCTCTTTTCTAAAAGGGAGAGTTCTTCTTTCTCCAAAAGTAGGGGACAGAGTACGTAAATGAATTAGCAACCTTTGAATTACATCCAGTATTCCCAATCTGTTAACATGATGTCTACACTTTGAGGTCTTATTTCCACTACATGGCTTACTCTGAGGTCTTGTGTGGAATGACAACATATTGTATTTTCTCACCTGACTCATCAATTTCAAGGGTAGGAGAGTAGAGCTACATCCTTAAACATCTTATCAATTGCCTTCATTTGCAGGATCAACCAACTCCATGTCCATTTCCTGATTGGTCCGCTGTTCAGGTTAAGTGTTTTGCTAGTAAATTATCCTATAATCTCCACTTCCAAAAGATAGAATATATAATGTAAGCATCAATACAAAATTTTTCAGGCATATTATGGCCCTGGTGTCTTACCACCGACATATTTTGCCCCAGCAATAGCTTCAGGCCATGCTCCTCCACCATATATGTGGGGTCCTCAGGTAATTTATTTTCGATCTATCTATGCAATGAAGTTCCAGGTGTTGCATGAAATCTGAATTTCTCTCTGCATATCTGCAGCCTATAATGCCACCCCCTTTTGGGACCCCGTATGCTGCGATGTACCCACACGGTGGAGCTTATCCACACCCTCTTATGCCCATGGTAAACATTAAACTTGATGTGCTTCCATACACTTTTTTGTTCAATTAAACTTGTTAGTTGAAGCATTAAATATAAGATTTCTGCCTAACCATTTTAGATAGATGTTTTGTTATCAATAATGGACTTGCACAAGATATCGTAGTTTTGTGGAAAATCGGACAACCAAGTCCCATCATATACAGTATCAAATTAACTTCTAACATGGCAGATATTTTGGAAAAGTCTATCACGATTGACCAGACAACACAGTATATTAAAGGGAAAAAATGTATGCTAATCTGACTTCTGTAATGTTGTTTACGGTGCACCATAATCAGCACTGATTTCATACCAAGCATATCAAACTTTTAAATGATGTGCCGAATACTAGCTTACAGGAAGAACATACGTGTAGGCACAGTAACAGAATCACATTCCTAATGATCCATCATGCTTGTTCCCCTTGGACCATACAGTCTGATTGTTTTCATTATTTCAGTTACAGCGTCAGAACCTCTCATATTGATTCAATATATTTATTCTGCTAACTCCTATTAATTTGTTTTATGTCAATTCTTTCAAGATGGCAAATCCATTGAGCATGGAACCAGCCAAGTCTGCAAGCAGTAAGGAAAAAGGCTCCAACAAGAAACTTAAGGAAGTTGATGGGGCTGCAGTATCCACTGGGAGTGGTGACAGTAAAAAAACAATGACGTCTAGTGGGGATTACAGTGCAGAAGGCTCTAGTGATGTAAATGATCTAAAGGTACCAGTTAGTTTCAAATGCATGCTACATTGTGTTATCTTGTTGTTTTCTAATGAACATGTCTGAATATGCTTAAATATACTAAAATTGTACATTCTTTAGGTGGGCAAGACTGGCAGGAAACGGAGATTGGATGATGGAGCTGGTATTTCACTTTGTAACAACTTTTTTAATATCATAGGCATAATGCTAATTTCATTTTCCCTCATCTTTGTAAGACTTGTTATAGATGTATGCAGTGCCAAACTTGATTAATCATTTGCTTCAGCGGCTATCTTGTCCTCTATCATGCCTTGTTTGGTATAACTTGCAACAATTTTTTTATTCTCAACATTATCCCTTTGTATTATTTGGCTCTTCTTAATAGAAAATAGTGTAAAGCTTCTGCACCTTCCTGAGAAAAGGGAAAAATATTTATCAAATGACACATAAGACACATCTTTATCTTTCAGTTTCTTAATGGAATGGTGACTAATCAAATCCTGTTTCAAATTTGACTTTGTAAAAAAATAGTGGCTAACAACTTAAATCTCTGCCAGGTGCTGAAACATCAGCAGCTGCAAAGATGGAAAATGCTTTACCTCCCAGCCATATATTGGGAAGTACTGCGGTTTTGCCAAATCACAGCTTTCCAGCTCAAGTAATTAGGCCCAGTGCTACTAATGTTGCTAATTCGAGGGCATTGGGCACACCAATATCTCCACCGCCTGGTGTGATTGTTCCAAGTCATACAGGAGTATCAACGGAATTACTGATCAAGGTATCTTCAATCTGACATCATTTAGAAAACTGTGAAATCAGAAAGTATGAAAAACAATAATTTTATGTAAATAAGTTAACTTTCATGTCATTGTTATTCCTTGAAAAAAATTACACTAGTATATATACATTTCTCAGGGATTAACTTTGTGGAATTCTTATATGCCAGGATGAAAGGGAATTAAAGCGTGAAAAGAGGAAACAATCAAATAGGGAATCCGCCAGACGATCAAGGCTGAGAAAGCAGGTATATTATAGTAGCAATTACCCTGTGATCAATATGAGCAAAACCCAGTTTTCTGAAGAAGAAAAAGAGGCATCATCCTGGAAACATGGACTGAAACTGAAAACCAATTTGGACATTCTGTTTTGGGAAAGGGATTTTATTGCAAATCCCAGTGAAGTCACAGGATAATTTAATCACATACATGTCATGTCACATACAAAATTTCAAGTTAGTACAGAACATATTTCCATAATGCTTTCACTTATGATGTCAGTGTTTTCGTTTAGGCTGAAACAGAGGATCTGGCTACACAAGTAGAATCACTTGCAGCAGAGAACACGTCACTTAGATCTGAAATCAGTAGGCTATCAGAAAGCTCCGAGAAGCTCAGGCTGGAGAATTCGGCTCTAATGGTACTGAACCTCTTTTATGCTTCCACATAACCCTTAACATGTATTATATACATTTCTCTGATAGAAATGTGCCTTATTATTCCTAGGGGAAGCTTAAGGATCCTGCAGCATCGACCCAGGCAGAAACATCTCTGCAGAAAACCACCACAGCCTCCTCTCCTCGCGTCGTGGAGAACTTTTTGTCAATGATCGACAACACGAACAAGACGAGTGTCAGGCACACAGAGCATGCTGAACCCAAGCTTCGACAACTCCTCGGCTCCGGCCCGGCCACTGATGTTGTTGCTGCAAGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020389

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020389&oldid=49145"