BGIOSGA020390

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Revision as of 03:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020390| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020390, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA020390

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020390, complete gene.

LocusTag

OSJNBA0040E06.8

Ensembl Transcript ID

BGIOSGA020390-TA

Ensembl Protein ID

BGIOSGA020390-PA

Length

2129

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29681604..29683732

Sequence Coding Region

29681604..29681714,29681826..29681900,29682242..29682298,29682424..29682587,29682848..29682982
,29683084..29683186,29683341..29683440,29683524..29683732

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29681604..29683732 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29681604..29683732 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGCACTACACCAACCTGACGGATCCGAGGACGGAGCTGGAGGTGGTCAGGGACTGGAACGGCGTCGACCAGGTCGTGCTCCGCTCGCCGCGGGGCGCCTACGCGCGGGTGAGCCTGCACGGCGGGCAGGTCCTCTCCTGGAGGAACGACCGCGGCGAGGAGCTTCTCTTCACCAGCAGCAAGGCAATCTTCAAGCCACCAAAGGCGATGCGTGGTGGAATCCCGATATGTTTTCCACAGTTTGGAAATTCTGGAACATTGGAGCAACATGGATTTGCAAGAAACAGGATATGGGCCCTAGATGAGGAGCATCCACCATTAAATCAAAATGATAACAACAGCAAAGCTTCTGTTGACCTTATACTAAAGCCATCTGAAGATGACCTGAAGTGCTGGCCACATGGTTTTGAGTTCCGCCTGAGAGTTTCTCTTACAAAGGATGGGAACCTGTCACTAGTATCACGCATCAGAAATGTTAATGGCAAGCCATTCAGTTTCTCATTTGGTTATCACACATATCTGTCTGTTTCTGACATCAGTGAGGTGAGGATAGAAGGCCTTGAGACACTTGATTATCTCGATAATCTTAGCCAGAGAGAACGTTTTACAGAACAAGGAGATGCCATAACATTTGAATCGGAGGTTGACCGAGTCTATGTTAGCTCACCAAATGTAATAGCTGTTCTGGACCATGAGAAGAAACGCACATTTGTCATAAGAAAGGAAGGACTGCCTGACGTTGTTGTGTGGAATCCGTGGGAAAAGAAATCGAAAAACATCGTGGACTTCGGCGATGAGGAGTACAAACAGATGCTGTGCGTTGATGCGGCTGCAGCGGAGAGACAAATCACTCTGAAACCGGGAGAGGAGTGGACAGGGAAGCTTGAGCTTTCTGAAGTTCCATCGACTAACTGCAGTGGCCATCTTGATCAACCCGGTATCATCATTTAG</cdnaseq>

Protein Sequence

<aaseq>MGHYTNLTDPRTELEVVRDWNGVDQVVLRSPRGAYARVSLHGGQVLSWRNDRGEELLFTSSKAIFKPPKAMRGGIPICFPQFGNSGTLEQHGFARNRIWALDEEHPPLNQNDNNSKASVDLILKPSEDDLKCWPHGFEFRLRVSLTKDGNLSLVSRIRNVNGKPFSFSFGYHTYLSVSDISEVRIEGLETLDYLDNLSQRERFTEQGDAITFESEVDRVYVSSPNVIAVLDHEKKRTFVIRKEGLPDVVVWNPWEKKSKNIVDFGDEEYKQMLCVDAAAAERQITLKPGEEWTGKLELSEVPSTNCSGHLDQPGIII</aaseq>

Gene Sequence

<dnaseqindica>1..111#223..297#639..695#821..984#1245..1379#1481..1583#1738..1837#1921..2129#ATGGGGCACTACACCAACCTGACGGATCCGAGGACGGAGCTGGAGGTGGTCAGGGACTGGAACGGCGTCGACCAGGTCGTGCTCCGCTCGCCGCGGGGCGCCTACGCGCGGGTGAGCAGGTTTTTGCGAATGGATTTTGATCGGCTTGGCATTGAGTCCTTTGGTTTGGTTTGGTGCGATTCTGATGGCTTTGTTTTCTTCGTCGTGGTGTGTGTTTTGCAGGTGAGCCTGCACGGCGGGCAGGTCCTCTCCTGGAGGAACGACCGCGGCGAGGAGCTTCTCTTCACCAGCAGCAAGGTGACGTTTTTTTTTTTTTCAATTCATTTTTCGATTCTTCAGTGCTCTGCAACCGGGTTCACATTACTGCGATTAGCCTAGGGAAGTGTATTTCGCAAGTTCAATTGATTGCAGTAGAATTCAAACTGTACGCTCGCGGGATATGTTCTTGGATTGATTCTGTTTGAGAAGTGTGTACTCTGAACATTAAACTGTACTTGTGGAAGGACAGTTCAGACGGGCTCTGAAGACACAAAAACCTGAACTGTTTCACTGTTTCCATCTGGGAAACTGAAGAAATCTTCAGTATTCTCTTCCATGGCTCTTTCACTGGCCTCAACACGCAGTTTCTTGACGTGCAGGCAATCTTCAAGCCACCAAAGGCGATGCGTGGTGGAATCCCGATATGTTTTCCACAGGTATCATAGTCTTCCATTGCACTGAAGATTTGTATTATATACTGTTACAAATAGGATGTCAATTGATAAGGAAGCTAGCTTCCCTTCTTTTTGGTCTTTTCTGATATCCACAAGACTCACTGCAGTTTGGAAATTCTGGAACATTGGAGCAACATGGATTTGCAAGAAACAGGATATGGGCCCTAGATGAGGAGCATCCACCATTAAATCAAAATGATAACAACAGCAAAGCTTCTGTTGACCTTATACTAAAGCCATCTGAAGATGACCTGAAGTGCTGGCCACATGGGTATGCATTTGTTTTTGTCCAATATGTATTTCCTTTTCTCTTATAGCACGCCTTTTTGTTAGTAAGGGCCATATGTCAAAGTTTTGTTATGTACTGCATCATGGGGGTAATTAGTTGAACAGCCTAATCCTGGCACTTTTGATGATAATAGTCAGGAGAATATTTTATTTCAGGGAGGTTGTTGAACATTTGCACCTCATCTCGTTGTTAATGCTGACTGAATTTGATTTTATGTATGATCCTGCAATATTTGATTTCAGTTTTGAGTTCCGCCTGAGAGTTTCTCTTACAAAGGATGGGAACCTGTCACTAGTATCACGCATCAGAAATGTTAATGGCAAGCCATTCAGTTTCTCATTTGGTTATCACACATATCTGTCTGTTTCTGACATCAGGTCAGGCATTTCACCCAACATTCTTTTTGTACTTCAACCACTTTTTGTTGGTGCCATATAATATTTTGAAGATGACAGATTATATATCTTGTTAATTCCAGTGAGGTGAGGATAGAAGGCCTTGAGACACTTGATTATCTCGATAATCTTAGCCAGAGAGAACGTTTTACAGAACAAGGAGATGCCATAACATTTGAATCGGAGGTGAAAAATGTTTGAATAATCATATGCGCTATATACTTTGATCTACTGATTCCGCAAATCTTGTTTTGACATTTTGTTGTAAAAATTTACTTGCCACATCATAAAGTCCAAGATTTACGGTGTTAGCACCTGGTCTATGTGCAAACATATGCAGGTTGACCGAGTCTATGTTAGCTCACCAAATGTAATAGCTGTTCTGGACCATGAGAAGAAACGCACATTTGTCATAAGAAAGGAAGGACTGCCTGACGTTGGTAAGACACAATATTCTCTTTGCCACCTAACCATGGTAACTTTGCTTGAAAAATTTCCATCATATTCGCTTTATTCCTCCCAGTTGTGTGGAATCCGTGGGAAAAGAAATCGAAAAACATCGTGGACTTCGGCGATGAGGAGTACAAACAGATGCTGTGCGTTGATGCGGCTGCAGCGGAGAGACAAATCACTCTGAAACCGGGAGAGGAGTGGACAGGGAAGCTTGAGCTTTCTGAAGTTCCATCGACTAACTGCAGTGGCCATCTTGATCAACCCGGTATCATCATTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020390