BGIOSGA020420

From RiceWiki
Revision as of 03:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020420| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020420, complete gene.| tag = OsI_211...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020420

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020420, complete gene.

LocusTag

OsI_21105

Ensembl Transcript ID

BGIOSGA020420-TA

Ensembl Protein ID

BGIOSGA020420-PA

Length

2914

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30074910..30077823

Sequence Coding Region

30074910..30074994,30075098..30075333,30076900..30076979,30077553..30077823

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30074910..30077823 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30074910..30077823 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCCTATGGGAATCCTGAAGTGCCCTTCCAGCTTGAAGCTCTCCGTTGCTGTTCCTGGTCATGCCCTCAACCCCTTCTCTGATGGCGGTAGTGGTAGTGGGTGCAACAACAATAACACAAGAGAACTGGGCATCCACTTGGACTTGGACCGCCCGTATGCAAGAGAAGAGCTACCGCAGCAAGGTGGCAGCATGGAGGTGCAGAAAGGGGAGGAGAGAGGCAGTGTTAGGCACAATAGCTCCAACCATAGGCGGCTTTCTAGGGTGCAATCCAAGCAACTTGATGAATTTTATCGTGTAAATCACGCAGTTGATTCCAAACAAAAGAAGGAGTTGGCAGATCGACTGAATCTTCGGATAAGTCAGGTGGATGCTTGGTTCCGCAACCGCAGGTTAAGGTCGAAGCAGAAATCCACGGAGATGGAGTGCGCCTATCTGAAGGAATGCTTCAACAAACTGAAAGAGAACCACCGCCTCCAGCTCCAGGTTGAGCAGCTCAGGTCAACGAGCTTGCAGCTGCAGCTGCAGCTGCAACTCCACAGCGAGCGAGTCGCCACAGCTCCCACTGGACAGCAAGCCGGCACTTCTGCGGCTGCTCGCATCTTCACTTTGCCTTTGTCCGGATACAACCCTTCCAGGGGGACTTGGTTCTCGCCAAATGCACACTGA</cdnaseq>

Protein Sequence

<aaseq>MEPMGILKCPSSLKLSVAVPGHALNPFSDGGSGSGCNNNNTRELGIHLDLDRPYAREELPQQGGSMEVQKGEERGSVRHNSSNHRRLSRVQSKQLDEFYRVNHAVDSKQKKELADRLNLRISQVDAWFRNRRLRSKQKSTEMECAYLKECFNKLKENHRLQLQVEQLRSTSLQLQLQLQLHSERVATAPTGQQAGTSAAARIFTLPLSGYNPSRGTWFSPNAH</aaseq>

Gene Sequence

<dnaseqindica>1..85#189..424#1991..2070#2644..2914#ATGGAGCCTATGGGAATCCTGAAGTGCCCTTCCAGCTTGAAGCTCTCCGTTGCTGTTCCTGGTCATGCCCTCAACCCCTTCTCTGGTAAGTTCATAATGCAACCAAACACGCGCAAAACATTAATTTCATTTTATCGCCATGCCACCAAAATTGTTGTATGGGTGAATTTTTGCATGTGTATATGCAGATGGCGGTAGTGGTAGTGGGTGCAACAACAATAACACAAGAGAACTGGGCATCCACTTGGACTTGGACCGCCCGTATGCAAGAGAAGAGCTACCGCAGCAAGGTGGCAGCATGGAGGTGCAGAAAGGGGAGGAGAGAGGCAGTGTTAGGCACAATAGCTCCAACCATAGGCGGCTTTCTAGGGTGCAATCCAAGCAACTTGATGAATTTTATCGTGTAAATCACGCAGTTGATTCCGTAAGCATGTTTCTTTTTTCAATATTTAAAATCACCACAGCCTTTCGAGTTATTAGTTCATTAATATTTGAAATATAGTAGATTAGGAATTAGATCTATATGTGAAGAATGGATTTAGAAACCATTAGATCAAGCAAGTTAAACTTTATCACTAGTATTTTGTACAACCATATGCATGTGCTTGAATTTTTCATCGAATATTTGTTTTGATAGATCACACATTACTACACACTAGTCACCAATATATGTAAAGCAGAGGTTATTATTGTGAATATTATAAATATTAAAAAATAATAATACACCAAATATTGGTTATTTGAATTTTGTTAATATATATAATTTTTTTCAAAGTTCTAAGTATTTTTTATTTATAGTTCAAAAGAAATTAGTTGCAATATGATATATAAGGTCCATCCTAAATAAGAAATCTTATGTTATTTTCCATTTTCTTAAGTTGAGAATTTTAAGTTTCTATTCAGTATTGTATTAATCTTTACTCGTATAAAAGGACTCCAATGGATAGCCATATATAACCATTGTAACTTTTAGATATTAAGCTATGAACTTTCTAATATTAGATAACAACTAATCGGATAGCCATATATAAAATTAAATCAAGATGAGTCTTCTCTATATGAAAATGTGAATAACATAAGTCTTCTCTACACAAAAATGTGAATAACATAAGTCCTATCTATATGAGAATGTGAATAACATATTTCATGAAAAATATGCTTTTATTTATTTTAGAAAATAATATGGTATTTTTTTTCCTTTTACCTATAGCAAAGCATGGGTATTTAGCTAGTTTAACAGAGATTCAGAATTGATAAGCATCAAACTGCATATGTTAAGAGATTTCAATTGTAGATTTTTCACGATTTAAAATAATTCAAGACTTTATAAATAACTTATATCAACTTATACTTTGTTTTGAGTCTCTATATATCATTTTTATGATTAGAATTATGAAATTAGAAATTGATAAGGAAGATGTTTATCAATTTATAGCCCCAATTATATCTTTTCAGTAATCTAATAAGAAATTAGAATTAAGCAATATTGAATCGTACATGGTTTGGGAGCCTCGATTATAACTTATACATGATTCTACTCAGTTTTTGAGAGTTATAGCTTTTTCATGATTTAATAATTTTAAAAGTTCACAGTTAATTAATATCGAGTTGTGTTCGCTTTGGAGTCTTAATTATAGCGTGCTTTTCCATAAGTTTGATTGACTGCCATGATAATTCAATCCACCCCACCCAATCACCATTTTTTTTCTAGTTAAGATCAAAGCTCTCTCAAAGTCTCCAATTAAAACAAGTATAGACAGATTTAGTTAACTTCTTATTTTGCAATACAAGGATACAACTGGTGTTTGTCTTTGTGTTGCTACAATGCTATACTAGAGTTCATGATGCTTGCTTGTACTGAACTAAACACAGGTCGAGCAGTTCGTACTTGCCTTGACCGTTTTTATTTTCAAATAATTAGTAGCTCGATTGTTCATTGTCAATGGAGACCAGTCACTTACTCTCTAGGAAATTAATGGAACATTTTCAGAAACAAAAGAAGGAGTTGGCAGATCGACTGAATCTTCGGATAAGTCAGGTGGATGCTTGGTTCCGCAACCGCAGGTTAAGGTAATTAGAAGTTTTTTCAATGCTCTCACTAATTAGAATGTTCAGTCATACTCATTCTTTCTTACATATATGCGTAATTCTAGTTCTGGTTTTCTCTTGTTCTGAAGGTTAAGCTTATATCACCTTTAACAAAAAGAGAGATAAATCTCTTTGTTTTTCTTTAACGTGATAAATCTAGATTGAGCCGTGCAATGGTCTAGACTTCCATTCTGAACTCTGAACCTTTTATTTTAAAAACTCGATGTCTGAACCATTGCACAGCTCTACGCCGTGTAATCCTTGGATCCTCTACCATAATGTTACTACCTTTACAGTTATTATTATATGGGTCTCACCTTTCTATTACCCCACATGTCGATGTCTATACCATTATGGTAGAGGATGTGAACCCAATGATTCCAGTAAGAAAGCCCTTAATAGTTTTCACAAACAGCAGTACAGATCAGTTAGCAGTGTAGAACAAGTTCAGAGTTCATCATCCGCCCCAGTGACTGTTATGCTATTACTAGTAATACCTTTCAGATTAATCTTCACAAACCTACAGTAAGTGTGATGTTGCTACTACCTGCTCAGGTCGAAGCAGAAATCCACGGAGATGGAGTGCGCCTATCTGAAGGAATGCTTCAACAAACTGAAAGAGAACCACCGCCTCCAGCTCCAGGTTGAGCAGCTCAGGTCAACGAGCTTGCAGCTGCAGCTGCAGCTGCAACTCCACAGCGAGCGAGTCGCCACAGCTCCCACTGGACAGCAAGCCGGCACTTCTGCGGCTGCTCGCATCTTCACTTTGCCTTTGTCCGGATACAACCCTTCCAGGGGGACTTGGTTCTCGCCAAATGCACACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020420