BGIOSGA020422

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Revision as of 03:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020422| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020422, complete gene.| tag = OJ1126_...")
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Gene Name

BGIOSGA020422

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020422, complete gene.

LocusTag

OJ1126_B10.14

Ensembl Transcript ID

BGIOSGA020422-TA

Ensembl Protein ID

BGIOSGA020422-PA

Length

5485

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30139142..30144626

Sequence Coding Region

30139142..30139400,30141195..30141370,30143684..30143887,30144023..30144176,30144280..30144626

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30139142..30144626 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30139142..30144626 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGTGCTGCGGAGCACGCAGAGCATGGAGGCGGAGGTGGAGGAGATGCGCGCCGCGCTAGCGCTCGCGCCGCTCGGCCGCCACGGCGCGTGGAGGTCGGGGGCCGCGGCGAAGCGGGAGGCCGGGGCGGAGGAGGGCGCGGCGCCCGAGGCCCGCACCGTGTGCGTCACCGGCGGGATATCGTTCGTGGGGCTCGCCGTCGTCGACCGCCTCCTCCGGCACGGCTACGCCGTCAGGCTCGCCCTCGAGACGCAAGAGGATCTGGACAAGCTGCGAGAGATGGAGATGTTTGGTGAGAACGGCAGGGACGGTGTCTGGACCGTGATGGCAAATGTAATGGACCCAGAGAGCTTGAACCAAGCATTCAATGGTTGTGTTGGTGTCTTCCACACATCATCCCTCATTGATCCAGGGGGCATCTCTGGCTACACGAAACACATGGCGATTCTGGAAGCCAGAGCGGCCGAGCAGGTTGTTGAAGCCTGTGTCAGGACAGAGTCAGTGAGGAAGTGTGTGTTCACCTCATCGCTACTGGCATGCGTGTGGAGGCAAAGCTACCCTCATCACCGTCGTCGCTTCCCCGCCATCATCGACGAGAGCTGTTGGAGCGACGAGAGCTTCTGCCGCGATAACAAGCTGTGGTTTGCGCTCGGGAAGACGATGGCGGAGAAGGCGGCGTGGAGGGCAGCACGGGGCAGAGACCTGAAGCTCGTGACGATTTGCCCGGCGCTGGTCACCGGCCCAGGATTCCGCCGGCGAAACTCCACTCCGTCCATCGCCTACCTCAAAGGAGCGCACGCGATGCTGGCGGAGGGCCTGCTTGCGACGGCGGACGTGGAGAGGGTGGCCGAGGCGCACGTCCGCGTCTACGAGGCGATGAGCGGCGGCGGCGCGGCCGGCGGCCGGTACATCTGCTACGACCACGTCGTCCGGCGCGGCGAGGAGTTCGCCGAGCTGCAGCGGCAGCTCGGCCTCCCGATCACCGGCGTGGCAGCTGCCTCGCGGCCCGGCTACTCCGACGACGGCGACGTCGGCGGCGACGGGCGGTTCGCGCTCTGCAACGGGAAGCTGGCGAGGCTGGTGTCCTCGCGGAGGAGGTGCACCTATGACGTCTACTACCCCGCTTCGTACGACTAA</cdnaseq>

Protein Sequence

<aaseq>MGVLRSTQSMEAEVEEMRAALALAPLGRHGAWRSGAAAKREAGAEEGAAPEARTVCVTGGISFVGLAVVDRLLRHGYAVRLALETQEDLDKLREMEMFGENGRDGVWTVMANVMDPESLNQAFNGCVGVFHTSSLIDPGGISGYTKHMAILEARAAEQVVEACVRTESVRKCVFTSSLLACVWRQSYPHHRRRFPAIIDESCWSDESFCRDNKLWFALGKTMAEKAAWRAARGRDLKLVTICPALVTGPGFRRRNSTPSIAYLKGAHAMLAEGLLATADVERVAEAHVRVYEAMSGGGAAGGRYICYDHVVRRGEEFAELQRQLGLPITGVAAASRPGYSDDGDVGGDGRFALCNGKLARLVSSRRRCTYDVYYPASYD</aaseq>

Gene Sequence

<dnaseqindica>1..259#2054..2229#4543..4746#4882..5035#5139..5485#ATGGGGGTGCTGCGGAGCACGCAGAGCATGGAGGCGGAGGTGGAGGAGATGCGCGCCGCGCTAGCGCTCGCGCCGCTCGGCCGCCACGGCGCGTGGAGGTCGGGGGCCGCGGCGAAGCGGGAGGCCGGGGCGGAGGAGGGCGCGGCGCCCGAGGCCCGCACCGTGTGCGTCACCGGCGGGATATCGTTCGTGGGGCTCGCCGTCGTCGACCGCCTCCTCCGGCACGGCTACGCCGTCAGGCTCGCCCTCGAGACGCAAGGTTAGTCATCGCTTGTCTGGCCCGCCCCACCCCGCCCTTGGCAGCAGCAGCAGTTGCGTGTTCGTCGAATGGGGAATTATTGCCGATGAGTTGGATGGTGTTTGCTTCGCATTTGATTTGACATCGGATCATGCCACCCGGGAGTTGGTACCAGTCTCTGTTTGTGAAATCTGTTTTGGTACACCGGCAAAATCGACTGCTTATTTTTAATGCCTGCAAAATGCAATGCAGTTCGATTCACGTACGTCTTCAATTTTAGCCAGAGAAAACAAGTTCAATTTTATTACTAATCCCTTGTCGGGCAGAAGATATCCAGTAATTTAGTCCAAACTTGTACCAATCCGATTTTCAAATTTTATAGTATGCAAAGTACCACTACCAAATTGCACTAATAAACGAAACTTAGATTAGTTAGTATATTCATTTTGGATCATTTATGCATTAAGTCATTGTCTCTAACCCCTTTGCACCCCTTGTTTTAGTTGGTAAACCTTTGTCTTTTTTTGCTCAAATCGTATTTTGTTTCCGCATGCTTCGGTTCATGCTTGGTGCATTGTGCTGTGGTGAACCTCACGCGATGAGCGTGTTGCACTTTGAATGCACGCACCAAAGTTCCGTTCCCTTTTTGCTATTCCTTTTTTTACGAGTCGAGGGAGAGAAAATTTTTTGAGTGACTGAACCATTTTTCCATTTTGGCACTTTTTTGTTGGAACCATTTTCAGTGAATTTTTTAGTGACTGAAGCAATTTTTGCTATTTTGGCAAAAAGTCCAATTTTTGTTCCAATTCCTGGAAAATTTTTTGAGTGACTGAACCATTTTGCTATTTTGGCAAAAAGTCCAAGGGAGTGAATGAAATTGCTTCGGTCTCCAATTTTTGTTGTTGTTATTTTTATTTGAGTGACTGAACCGTTTTGCTACTTAATTTGGAATGGGAACTTTTGCCCATTAAGATAATCAACTTCGTTCTTTGCAGTATGGAGAGCATATGACAGTAGTTGATCTCAATTCATTTTGTTTGTCTAGCCACTTCTGGTATTTGGAGGTTCCACGCATGATGTTTGGTATCTCCAGTCCTCTTTATGATGTAAAAAATATTAGGATTGGTAGCATGTTGCATCAAAAATGGTCCGCAACGTATCGCCATATATCACCTTCAGTAATGTATCTTTCACAATCTAACCAGCCAAGTCACTCCCTTTGGAAAACAAGGACCTACTAAGTCATGCGTATTAAAGGAGATGTGACATTTTTCTCCCCTGCTCGCTCACTCCACTTGTGTGACATAGGGTAATTTGGTCGGCGAATAGAGCAGAAGCAAACTTGCCAAAACAAAACAGCACAAATAAACTGCAATTTCCACAGCAGCACACAAATGTATTTGTTTCTAGTGGTGTTTACAGCCTACTTTACCTTGTAATAACTTACAAGGCACACAGGTTACAATCTCCTTTGACAACTATGAACCTTTTTGTTTTGGACAGTGGGAACCTGGGGATTGCATTAGCACAAGGATAAGGTCCTCTCTTCTTTATCAGTATGCTGATAGGTTCACCTCATCTTACAACCTTCTCAAATGGATTGTTTGGATGATTAATCTGACACCAAAAGGACTGCTGATGCACCCCTTCTTGTCCCATAGCTGTTGTCAGTTCAAAACGTGTACCATGCCAATGAATGAGGATGAGAAACCGTGGGCACTAAGTTAGATTGTAATTAATGGTAAACTGAAGTGAATTCTTCTGAATTTTTTTTTCTTTGAAGCTATCTTCTGAAACTTTTCTTTTCTATGGCAGAGGATCTGGACAAGCTGCGAGAGATGGAGATGTTTGGTGAGAACGGCAGGGACGGTGTCTGGACCGTGATGGCAAATGTAATGGACCCAGAGAGCTTGAACCAAGCATTCAATGGTTGTGTTGGTGTCTTCCACACATCATCCCTCATTGATCCAGGGGGCATCTCTGGCTACACGGTGAGTTGCTTGACCTGTGTTAGCGTTCATACAATATGTCAGATAAGTTCCCCTGCTTATTTGGTTCATCTGTGGAACAAGTATGCAATCTTGATAGTGTCATCTCTCCTACATATTAAAATGTATGAGCCACATCCACAAGCATCTTGTCTCTATTCTCTATGAATATAAGAGTGCACAATATGGGATAGGTAGATGTCATACCTCATGAATCAGGCTAACACACAGCATCACAAATCACAATCCTATTAGACTAGTAGGATATAGTTTTTAATTAAATGCATTTATAGTTAGAGTACACTTTATGCTGGTAAATACACAAATCAAAGGTAGGCCATGTGTTCTAGAGCAGTAGTGCTATATAACTGCTGAAATTATTGTTGGCTATTGACATTATGAATTGACCAATCATTTCTTCTCCGTTAATGGGAAAGACTTGAATATCTTTAACTTAAGGATGATAAGAACCAAGTCAGAAACAAAAGTATCTGTTAGCCAAGGCAACTGACTGATCTTTTGGAAAAAATATCAACTTTTTGTGGGGCGAAAACATTATCAACTTACCATGCTGAAATATCGAAAACCAGAGAAAAGTCATTACTCATTACTGGTCTATATGTCCCACTAACACAATACAAAAGTATACAGAGAGTTTTATAGAACTTAAAATTTGTAATTAGATGCGATGATCCAACTAGGTGTTGCTCTTTAGGGCTACACGAATAAACAGTGCCTCGGACTAGGTGGTAGGTATAGCACCAAATATAAACCCATAAATAAGTAGCATAATGCTTTTAAGCGTGGACCAGTGTTTGAAACTTCAACAAACAAATTGACTGAGAGTGGTACCACGTAATCTTTATTATATCATATATGATGTTGCCATGTACTTTAGGTTCATCTAGATTCTAATCATAGATATGGTGTTTGGTTTATTGGTTCTACTCAGCATATACAGGGAAACATCTTTTAGTTTTTTTCTAATAAAGGGGGAAAATCCAGCTTACAGATAAATAACATACAAGAAAAAAAAAGAGTGACTCCCTTAGGGCATCAGAGTATTGTCTGCACAATCAACACAATAGGGAGAAACAGCACAATGACATTTACTCAATCCCTACGGATATTGCAAGGAAATTCAGACGTCAGTCAGGAACAGCAAAGAGATTAAACTCAACAACACTTGTACAGTTGTACCCACTACATAGGCAATCGAAGTGTTATAGGAGTCCTGAGTCCATCCTTACGCCTGACATCTTTTAGGTCTATCATACCGTATATACAGTGTGATTTGCACCTGCAGCCTATAACATTCATCCTGTGATGCATATGTTTCGAAGATATGAAAGGCAGCCCATTACTATCTCGGTTGCAGTTGAAAGCTCAGCCACTTGACGAACAGTACGAATGTTTGTTCATCGCTTCTCTCTTTTCTCAGTTGTAGTAACTAACAGCGCACTTGTCAGACTTTTTGGTCAAGACTCAAGAATGACCTGAACAAATCAAATGGTTGGGTGGTCTATTGCCTTGTTCCTTTTGACATTCCCTGCAAAATCCATACTATTTTTGCAACCGCATGTTTCACTATTCCTCCTGTTTGCAAAGCTAATCATACTAGATAAAAAAAAACTAACCTTTTCATATATCAGATATACTTTTGCCTTTATTTTACGATAGCTCATTATGAGGACTTAAGAGGTAGCTGTGGTTCTAGAACAATTGCTTTGCTAGATTTTTATTAGAATATGCTTGCTAGACTTTCCAGTTTTATTATCTGTCACAGAAGTAATTTAAAAATTATACTCCCTTCATCCCAAGATAAACCAACTTCGCATGGGATATGACATATCCATAGAGGTTGGTTTATTTTGAGACGGAGTGAGTATGTTGCATGCCATGATTAATTGTTAGTTGGGCAGTCAAAATCCCGTTTTAGTGAGCATGGGGCATTGCCATAGCCTTACCACCAGATGAGCCAACCAAAGAATCCGAAACTGATTGGGCATCTAATGGTTTCAGTGCACTTGCTTATTGACGTGATCCACTGATTCCTCTATGGTCCACTCATGTCAACATACATGTTGTAGTAGTAGTAGTTAAGTTTCTTCAAATATATATTTTTTTGGGCAAGTTGTAATGGGTTCTTTAAGTTTGTTGTAATCTATATTCAAAGCCTGGAACGCTGAAAACCGTATGGTCTTGGCCAGCTTCACAGAAAGAACTCTTGCAATTTCAAGTTTGTGTGATAAAAGAAAATGAGCACCGAATTGAAATGCCTTTGCTTTCCTAACTTGTCCACACCAATTTCAACAGAAACACATGGCGATTCTGGAAGCCAGAGCGGCCGAGCAGGTTGTTGAAGCCTGTGTCAGGACAGAGTCAGTGAGGAAGTGTGTGTTCACCTCATCGCTACTGGCATGCGTGTGGAGGCAAAGCTACCCTCATCACCGTCGTCGCTTCCCCGCCATCATCGACGAGAGCTGTTGGAGCGACGAGAGCTTCTGCCGCGATAACAAGGTGAGAGAGGACAAACCAATCTCGAATTCTCAAATCAATATTGCTGCGTTTAAAATTAAAAGAACATAAGAACAGCTAGGAATCGAAGCAAGCATTCTGAATTTCTAATGGCTGGGTCATGACGAACATTTTCAGCTGTGGTTTGCGCTCGGGAAGACGATGGCGGAGAAGGCGGCGTGGAGGGCAGCACGGGGCAGAGACCTGAAGCTCGTGACGATTTGCCCGGCGCTGGTCACCGGCCCAGGATTCCGCCGGCGAAACTCCACTCCGTCCATCGCCTACCTCAAAGGTCAGTCGATCTCGGCGAACTATACTACTCTCTGAATCAATCCGATCGACCGGAGCTAAGCTCTGACGGACGGCGGCGCGCGGCGGCGAACTGTTCGGTGCAGGAGCGCACGCGATGCTGGCGGAGGGCCTGCTTGCGACGGCGGACGTGGAGAGGGTGGCCGAGGCGCACGTCCGCGTCTACGAGGCGATGAGCGGCGGCGGCGCGGCCGGCGGCCGGTACATCTGCTACGACCACGTCGTCCGGCGCGGCGAGGAGTTCGCCGAGCTGCAGCGGCAGCTCGGCCTCCCGATCACCGGCGTGGCAGCTGCCTCGCGGCCCGGCTACTCCGACGACGGCGACGTCGGCGGCGACGGGCGGTTCGCGCTCTGCAACGGGAAGCTGGCGAGGCTGGTGTCCTCGCGGAGGAGGTGCACCTATGACGTCTACTACCCCGCTTCGTACGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020422