Os12g0108800
| Gene Name |
Os12g0108800 |
|---|---|
| Description |
Reverse transcriptase, RNA-dependent DNA polymerase family protein |
| Version |
NM_001072485.2 GI:297612519 GeneID:4351281 |
| Length |
3896 bp |
| Definition |
Oryza sativa Japonica Group Os12g0108800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:478016..481911 |
| Sequence Coding Region |
478016..479270,480054..480358,480980..481305,481311..481911 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:478016..481911 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:478016..481911 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgctcggtgacccgatcatcgacaaagatgtggtgaagaagatgttagaggtggtccctaagtacctcgagcaggtggccatctccatcgagacactccttgatctggccacagtgtccatcgaggaggtcatcgggcggctgcgggcagtggagcaacggaagaaaccggcgagcagcgaggctaaggatagcagcggccgactacttctcacggaggaggattggctggcacgttacaaggcccgcgagcaggagaaaaagggtggtagctcaggcggcaatggcggcggtggccgcaatcgccgtcgcggcagaggaaaaggtcgcggtggaggcgaatcgaaccggaccgacacttcggggcaagatgggcagggaaacacctgccgtaactgtggaaaggccggccattgggcccgtgattgcatatcgaagcccatgaaatctggggaggcccacttggcccaggaggaggaagccacgctacttctgggagaggtgtgcacgatctctctcaccccttcatccgtatcgcccccaacttcaccgccgccgccactgtatcgcgcctctgctccgcctgctgattccacgtcgctaccgcatcgcgcccccacgccgctcactgattccctggtccgcgagcctattctgccgcccgtgccttcacaggttcgagagaaaatccatctggtcgaggagaaggtgcacgcccagctctataatgaggagcagaaggatgaccggcggtgggtggttgacactggcgcgaccaaccacatgtcgggcgcccaatccgccttctccaatctcgattccaccgtcagtggctccgtcaagtttggtgatggctcggtggtgcggatcgagggtcgtgggactgtcatcttcgactgtaagaacggtgagcaccgcttcttcaccgacgtgtatttcatccctaagctgcagacaaacatcatcagcgtgggtcaactcgatgagatcgggggcgaggccctcgtccacggtggattccttcgcatgcgtgatgaggacgggcggctcctggccaagattccctgcacccccagccggctctacgtgctcgacctcaccatctcatgggccggctgcttcgcggcgcggggagcggagaatgcctggaggtggcacgatcgcttcggccacctcaacttccctgcgctgcggaaaatggcacgggaagggatggttcgaggcctcccagagctggaacagacggaccaactgtccaacttcgataacacagaagcggagccattcgaagttgagttcatggcggtcccgttcgttgagccgaccgacgacgtggctgcagcgtcaccaccgacttcacccgcgccaggaacagctgctgggggccggacaccgtccccagctcctgtggagctcgccacaccgccaagttcacagggtgatctagacgctgaccacggcgatgaggcccctttgcgtttccgcaggattaacaacgtcctgggagatgctgaggtgcctggtcttgcacaccgggagctggctgatgagctcaatgtggatgctggtgacataaaagagttcaagttggagatgctgcagcaattcaagatgagcgatctaggcctgctctcctattatctgggaattggggtacgccaagatcacaacggcatctctctctctcagtctgcatatgccttgaagctcttggagaagaccgggatggtggactgtaatccctgtcacgctcccatggaggccaagttgaagctgagcaaatccagtactgctgctcttgttgatgccacatactatcgccgcattgttggtggcctacgatacctcgtcaatacaaggcctgatctggcttctctgttggctattcgtttcatggcggagccgcgcgaggatcacatggctgcagtcaagcacatactgaggtacatcgccggcacccgagatcatggtgtgtcgtactcaggaggcaagacagaggagctgaagctgactgggtacagcgacagcgacatggccggcgacgtcgacgaccgcaagagtaccactggcgtgctgtttttccttgctcagaaccccatcacctggcaatctcaaaagcagaaggtggtggcgctctcttcttgtgaagcagagtatgtggctgcgacaacggctgcgtgtcaaggggtgtggttgcaggggctccttagcgaaatacttggagcaccggcgacggcgccaattctcaaggtttacaacaagtccgccattgctctatcaaagaacccggttcaccacgatcgaagtaagcacatccaaactcgttttcatttcattcgagagtgtgttgatgacgggaagatcatcatcgagtatgccagttcagtggagcagctagctgatctgcttaccaagcccttgggaaggcagcgtttccaggagctgagcgagcttgttggtgtgatcaacacaaaaggccaaagttga</cdnaseq> |
| Protein Sequence |
<aaseq>MLGDPIIDKDVVKKMLEVVPKYLEQVAISIETLLDLATVSIEEV IGRLRAVEQRKKPASSEAKDSSGRLLLTEEDWLARYKAREQEKKGGSSGGNGGGGRNR RRGRGKGRGGGESNRTDTSGQDGQGNTCRNCGKAGHWARDCISKPMKSGEAHLAQEEE ATLLLGEVCTISLTPSSVSPPTSPPPPLYRASAPPADSTSLPHRAPTPLTDSLVREPI LPPVPSQVREKIHLVEEKVHAQLYNEEQKDDRRWVVDTGATNHMSGAQSAFSNLDSTV SGSVKFGDGSVVRIEGRGTVIFDCKNGEHRFFTDVYFIPKLQTNIISVGQLDEIGGEA LVHGGFLRMRDEDGRLLAKIPCTPSRLYVLDLTISWAGCFAARGAENAWRWHDRFGHL NFPALRKMAREGMVRGLPELEQTDQLSNFDNTEAEPFEVEFMAVPFVEPTDDVAAASP PTSPAPGTAAGGRTPSPAPVELATPPSSQGDLDADHGDEAPLRFRRINNVLGDAEVPG LAHRELADELNVDAGDIKEFKLEMLQQFKMSDLGLLSYYLGIGVRQDHNGISLSQSAY ALKLLEKTGMVDCNPCHAPMEAKLKLSKSSTAALVDATYYRRIVGGLRYLVNTRPDLA SLLAIRFMAEPREDHMAAVKHILRYIAGTRDHGVSYSGGKTEELKLTGYSDSDMAGDV DDRKSTTGVLFFLAQNPITWQSQKQKVVALSSCEAEYVAATTAACQGVWLQGLLSEIL GAPATAPILKVYNKSAIALSKNPVHHDRSKHIQTRFHFIRECVDDGKIIIEYASSVEQ LADLLTKPLGRQRFQELSELVGVINTKGQS</aaseq> |
| Gene Sequence |
<dnaseqindica>1..1255#2039..2343#2965..3290#3296..3896#atgctcggtgacccgatcatcgacaaagatgtggtgaagaagatgttagaggtggtccctaagtacctcgagcaggtggccatctccatcgagacactccttgatctggccacagtgtccatcgaggaggtcatcgggcggctgcgggcagtggagcaacggaagaaaccggcgagcagcgaggctaaggatagcagcggccgactacttctcacggaggaggattggctggcacgttacaaggcccgcgagcaggagaaaaagggtggtagctcaggcggcaatggcggcggtggccgcaatcgccgtcgcggcagaggaaaaggtcgcggtggaggcgaatcgaaccggaccgacacttcggggcaagatgggcagggaaacacctgccgtaactgtggaaaggccggccattgggcccgtgattgcatatcgaagcccatgaaatctggggaggcccacttggcccaggaggaggaagccacgctacttctgggagaggtgtgcacgatctctctcaccccttcatccgtatcgcccccaacttcaccgccgccgccactgtatcgcgcctctgctccgcctgctgattccacgtcgctaccgcatcgcgcccccacgccgctcactgattccctggtccgcgagcctattctgccgcccgtgccttcacaggttcgagagaaaatccatctggtcgaggagaaggtgcacgcccagctctataatgaggagcagaaggatgaccggcggtgggtggttgacactggcgcgaccaaccacatgtcgggcgcccaatccgccttctccaatctcgattccaccgtcagtggctccgtcaagtttggtgatggctcggtggtgcggatcgagggtcgtgggactgtcatcttcgactgtaagaacggtgagcaccgcttcttcaccgacgtgtatttcatccctaagctgcagacaaacatcatcagcgtgggtcaactcgatgagatcgggggcgaggccctcgtccacggtggattccttcgcatgcgtgatgaggacgggcggctcctggccaagattccctgcacccccagccggctctacgtgctcgacctcaccatctcatgggccggctgcttcgcggcgcggggagcggagaatgcctggaggtggcacgatcgcttcggccacctcaacttccctgcgctgcggaaaatggcacgggaagggatggttcgaggcctcccagagctggaacagacggaccaactgtgtgagggatgcctcgccggcaagcagcggcggactccgttcccggagcagggacagctgcgcgccgagcgagccttggagctcgttcatggagacctctgtggccccataacgccggcgacgcccggtggtaagaaatacttcctgcttcttgtcgatgttttcagcaggtacatgtgggtcgagttgctcccgtcgaaagactgcgcccccgctgcaatcaagcggatacgggtggtggccgagacgcaaagcaggcacaagctgagctccctccgcactgatcgtgggggggagttcacctctgccgacttcaccgaccacctcgtcagcaccggcgttcgccgccagctcactgcgccgtattcgccccaatagaacggcgtggttgagcggcgcaaccagacgatagtggcggccgcccgcagcatgctcaaggccaagaagctccctagatatttctggggggaagcggcggcgacggcggtctatctgctcaacagattgcctacaaagagcgtcgaggggatgactccctttgaggcctggtacgggaagaagccagcggctcaccacctgcacacgttcggctgcatcgcccacgtcaagaacacatctcctcacctcaagaagcttgacgacaggagcacaaagatgatctttgtggggtacgaacccggcacaaaggcgtatcgtgcctataatccagccaccgggcgtgttcacatcacgcgtgacgtggtgtttgatgaggcggcccaatgggactggggtgcagcagcagccaacttcgataacacagaagcggagccattcgaagttgagttcatggcggtcccgttcgttgagccgaccgacgacgtggctgcagcgtcaccaccgacttcacccgcgccaggaacagctgctgggggccggacaccgtccccagctcctgtggagctcgccacaccgccaagttcacagggtgatctagacgctgaccacggcgatgaggcccctttgcgtttccgcaggattaacaacgtcctgggagatgctgaggtgcctggtcttgcacaccgggagctggctgatgagctcaatgtggtgagtgtagaggagccagcctcctttgctgaagcagagcgagaggcctgttggtgcaccgccatgcttgaggagcttcaatcaatccaggacaatgcaacctgggacgtcgtcaaccttcctgcaggacatcgccccattggtctgaaatgggtgttcaaggcaaagcatgacgagcgcgggcacatcgtcaagcataaggcccgcctcgtcgcgaaaggctacgtccagcagcgcggcaccgacttcgacgaggtgtttgcgccggtcgcaagactggaatctgtgaggctgatcctcgccgttgctgcgcagcaggtctagcaagtccaccacatggatgttaaatccgcgttccggaatggggaacttcaagaggaggtctacgtacaacagcctccgagattcaccgtcggcaaggaaggacaagtcctgaagctgaacaaggctctgtatggactacgacaagcaccacgagccttgtactcgaagcttgatgcatgcctcgtctccctcggcttcacccgtagcgaccacgaacatgctgtgtacacacgacgatctgcgcacaagccgctaatcgtgggagtgtatgtcgacgacctcctcatcactggccaggatgctggtgacataaaagagttcaagttggagatgctgcagcaattcaagatgagcgatctaggcctgctctcctattatctgggaattggggtacgccaagatcacaacggcatctctctctctcagtctgcatatgccttgaagctcttggagaagaccgggatggtggactgtaatccctgtcacgctcccatggaggccaagttgaagctgagcaaatccagtactgctgctcttgttgatgccacatactatcgccgcattgttggtggcctacgatacctcgtcaatacaaggcctgatctggcttctctgttggctatgtgagtcgtttcatggcggagccgcgcgaggatcacatggctgcagtcaagcacatactgaggtacatcgccggcacccgagatcatggtgtgtcgtactcaggaggcaagacagaggagctgaagctgactgggtacagcgacagcgacatggccggcgacgtcgacgaccgcaagagtaccactggcgtgctgtttttccttgctcagaaccccatcacctggcaatctcaaaagcagaaggtggtggcgctctcttcttgtgaagcagagtatgtggctgcgacaacggctgcgtgtcaaggggtgtggttgcaggggctccttagcgaaatacttggagcaccggcgacggcgccaattctcaaggtttacaacaagtccgccattgctctatcaaagaacccggttcaccacgatcgaagtaagcacatccaaactcgttttcatttcattcgagagtgtgttgatgacgggaagatcatcatcgagtatgccagttcagtggagcagctagctgatctgcttaccaagcccttgggaaggcagcgtttccaggagctgagcgagcttgttggtgtgatcaacacaaaaggccaaagttga</dnaseqindica> |
| External Link(s) |
