Os12g0108900

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Revision as of 10:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0108900| Description = UBA-like domain containing protein| Version = NM_001072486.1 GI:115486933 GeneID:4351282| Length = 2752 bp| Definit...")
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Gene Name

Os12g0108900

Description

UBA-like domain containing protein

Version

NM_001072486.1 GI:115486933 GeneID:4351282

Length

2752 bp

Definition

Oryza sativa Japonica Group Os12g0108900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:482987..485738

Sequence Coding Region

482987..483019,483153..483362,483503..483604,484601..484700,484775..484866
,484962..485738

Expression

GEO Profiles:Os12g0108900

Genome Context

<gbrowseImage1> name=NC_008405:482987..485738 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:482987..485738 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggatagcgagttcgagtgggatactgatggatgctaatgggaaggccaatggatcagcaccatcagctttggtggcttactttttgggaatgggtttctcgagagagatggtcttcagagctatcaaggagattggtaatgataacaataatacatttcctcatttgcttcaactgttgccgtttctttcaggggacacagattcggagcaaattcttgagttacttctcacttatcagattcttgaagaagaagatgaggaggaggatgttaattgggacgaggatgatactgttgacaattttgatagggctacttactctgatggttctggtgatgaggactttttacaagagatgtccgagaaagatgagaaaatcaagtccttagtcagcatgggttttcctgaagatgaagcaatgagggctattactagatgcggtctggatgcgtctgtagatttgttggttgagtcaatctatgcaccagcatctgcaggaaatgtttattttacaaacttatctgactatgaggatacagagttcagttcctttggaggaagaaagaaaacaaaattaatagatggaaccaagaaaaaaagagaacggtatagaagtagaccacaatggaatcaagtgccatttgacggcagccatgaagagccaatgcctcttccaaatccaatggtgggattcagcttgcccaatgacgggttaaggtcagtccacagaaaccttcctgaccatgctcttggaccaccattcttttactatgaaaacgtggccctagcaccaaaaggtgtatggacgaccatctcaaggttcttgtatgacatttatcctgagttcgtagattccaaatacttctgtgctgctgctaggaagaggggttacatccataacttgccgattgagaacaggtcacctgttcttcccattcccccaaagacaatatctgaagcctttccttctactaagatgtggtggccctcttgggatccaagaaggcagttcaactgcttgcaaacttatgtggcaagcgcaaagcatacagaacggatacgatgtgctcttggtagattcggtgatgcactacctccagcagttcagaagagtgtcttggaagaatgtaggaagtggaaccttgtctgggttggaaagaacaaggttgctactctagagcctgatgagatggaattcctattgggataccctaggaatcataccaggggagttagcaggaagcgagatatagagctcttgggaattcattccaagttgatacagttgcataccacctctctgtgctga</cdnaseq>

Protein Sequence

<aaseq>MRIASSSGILMDANGKANGSAPSALVAYFLGMGFSREMVFRAIK EIGNDNNNTFPHLLQLLPFLSGDTDSEQILELLLTYQILEEEDEEEDVNWDEDDTVDN FDRATYSDGSGDEDFLQEMSEKDEKIKSLVSMGFPEDEAMRAITRCGLDASVDLLVES IYAPASAGNVYFTNLSDYEDTEFSSFGGRKKTKLIDGTKKKRERYRSRPQWNQVPFDG SHEEPMPLPNPMVGFSLPNDGLRSVHRNLPDHALGPPFFYYENVALAPKGVWTTISRF LYDIYPEFVDSKYFCAAARKRGYIHNLPIENRSPVLPIPPKTISEAFPSTKMWWPSWD PRRQFNCLQTYVASAKHTERIRCALGRFGDALPPAVQKSVLEECRKWNLVWVGKNKVA TLEPDEMEFLLGYPRNHTRGVSRKRDIELLGIHSKLIQLHTTSLC</aaseq>

Gene Sequence

<dnaseqindica>1..33#167..376#517..618#1615..1714#1789..1880#1976..2752#atgaggatagcgagttcgagtgggatactgatggtgagtttgaggcctcgtctgctccagccttttcgaacacggatgcacctggtctgtccacgagctggtcatttgtttaaaccatgatattaccttgctataattataatcataatatggtgtttgtctaaaggatgctaatgggaaggccaatggatcagcaccatcagctttggtggcttactttttgggaatgggtttctcgagagagatggtcttcagagctatcaaggagattggtaatgataacaataatacatttcctcatttgcttcaactgttgccgtttctttcaggggacacagattcggagcaaattcttgagttacttctcacttatcaggtatttgttcacgtggttgcatcactttgtttattatctaatgctctattgtacaagtcatgttgtgtaatactgtaatgcaggcgataggcagtgacccttcagtgggtaacagctctcattctgcctgtgacccctagattcttgaagaagaagatgaggaggaggatgttaattgggacgaggatgatactgttgacaattttgatagggctacttactctgatggttctggtgatgaggtatgcacatgactccctccttggtcattatatatttatatcagatacttgttgtgtctatttctcgaccaatttacctgatcatgatcaaacctttgttatacttgtttcatgccaagcacacattcccttttagtgcttgtctaaatgatctattggtccaataaattggaaggttttgtgacttaagttatgtttcacttttatttagtaaactagtgtacatgcttacctgtactgcaatactatagtttttttgggttatctataaaacagtacctgttcctgtagggttgttaaaggagctttgttgatcctgctcttacttctatgtttctttagctggcatttttgtatggtgcctttatagtgagggagagttagcagaactactacaggaccatcaaagaaatgatcatatacttctacaaggtcgtattcaaaccaagcaatgatgaaagatagtctactggatgcctataattgaatggttgcaagttaagaccaccagacagaacaatgataaccactggctacatctgaacacataatagacaacaaaaaatagaactgaaatgatgcctatgagagcttaggtaatctgtgctgggcatttatccatgtgttgatgattgataagctgtactccccctcctttttgtggcctaacaggctttcttgtttcaccattttttgaatagttttactactttttcattacatatttagtatgagtttcctctaactttaatcctcaaaataagttcctctatagtgtggtagtatctgtttgcatggagttgtaagacgcaacaacaaatttgacacagaaggataatcgtatattttgttgcagtaaatttgggttttacaaatggtacatgcatatatgtgatgcctgcattagttgctttgttgggaggttatttcagactgcaattcatgagtgagatgtagcaaatgttttcagtctgcttgtaatgtgctttgttgcaggactttttacaagagatgtccgagaaagatgagaaaatcaagtccttagtcagcatgggttttcctgaagatgaagcaatgagggctattactagatgcggtatacctctattgaagttgctgctttgacagtaaggagccttatactgcctatgctgggttaaattttggcaggtctggatgcgtctgtagatttgttggttgagtcaatctatgcaccagcatctgcaggaaatgtttattttacaaacttatctgactatgaggtatgggtaccttgtgattatagagcatctgaatgatgaaattgttttcatttctttaatgtaatgccactggcataatgtttacttttgtgcaggatacagagttcagttcctttggaggaagaaagaaaacaaaattaatagatggaaccaagaaaaaaagagaacggtatagaagtagaccacaatggaatcaagtgccatttgacggcagccatgaagagccaatgcctcttccaaatccaatggtgggattcagcttgcccaatgacgggttaaggtcagtccacagaaaccttcctgaccatgctcttggaccaccattcttttactatgaaaacgtggccctagcaccaaaaggtgtatggacgaccatctcaaggttcttgtatgacatttatcctgagttcgtagattccaaatacttctgtgctgctgctaggaagaggggttacatccataacttgccgattgagaacaggtcacctgttcttcccattcccccaaagacaatatctgaagcctttccttctactaagatgtggtggccctcttgggatccaagaaggcagttcaactgcttgcaaacttatgtggcaagcgcaaagcatacagaacggatacgatgtgctcttggtagattcggtgatgcactacctccagcagttcagaagagtgtcttggaagaatgtaggaagtggaaccttgtctgggttggaaagaacaaggttgctactctagagcctgatgagatggaattcctattgggataccctaggaatcataccaggggagttagcaggaagcgagatatagagctcttgggaattcattccaagttgatacagttgcataccacctctctgtgctga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0108900, RefSeq:Os12g0108900