BGIOSGA020456

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Revision as of 03:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020456| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020456, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA020456

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020456, complete gene.

LocusTag

OSJNBA0009C07.12

Ensembl Transcript ID

BGIOSGA020456-TA

Ensembl Protein ID

BGIOSGA020456-PA

Length

2109

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30524934..30527042

Sequence Coding Region

30524934..30527042

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30524934..30527042 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30524934..30527042 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCAGCTCCGGCAGGTCGGCGAGGCCATCGGCGGCGTCAACGCCCTCATGGCCTTCCACGACGACCTCCGCTGCATCAACCCTCGCCAATGCGCCCTCCTCGCCCACGCCTACGCCCTCGCCTTCCGCGCCGTCGCCGGCGAGCTCCGCGCCCGCCTCCGCTTCCACGACCGCCTCACCAAATGGAAGCCCCTCGACGATCCCCTCCGCGAGCTCCACCGCGTCGTCCGCGACGGCGAGGCCTACATCCGCCACTGCCTCCTCCTCGACCCGGCCCACTGGTGGGCGCGCGCCGCCGCCGCCACGCACGGCACGGAATGCGTCGAGCACCACCTCCACAACCTCCTTTGGTGCGTCTCCGTCGTCGTCGAGGCGGTCGAGAACGTCGGCGAGGTCACCGGCTCCGACCCCGACGAGCTCGCCCGGCGGCGGCTGGCGCTGGCCAGGGACTACGACAAGGACCTGCTCGATCCAAAGCTCTTCCGGGAGAGGCTCGGCGAGACGTTCCTCGCCACGCGTGAGCTCGCCGCCCGGATGGACATGGCGTGGAAGGAGGACAGGTGGCTGCTGTCCCAGCTTCTCGACGAGAGGAAGGGCCCGACATCGTCGCCGGAGCCGCCATTGACGCGGCAGGAGCACCGGCTCGCCGACCTCCTCGCCGCGCCGCGCGGGAAGCTGCACCCGGCGAGCGTGCTCCTGATGAGCGACTTCCACATGCGGAGGCGCCTCGGGGGGAACGGGAACCTCAAGGAGGTGCAGTGGTTGGGGGAGGCGTTCGCCGTGAAGCACGTCGTCGGCGTCGACGCCGAGGCGGCGGCCGCGGAGGTGGCGGCGCTGGCGTCGGTGTCGCCGCACCCGAACGTGGCGCACTGCCGCTACTGCTTCCACGACGAGGAGAAGAGGGAGCTGTACATGGTGATGGACCAGCTGATGAGCAAGGACCTCGGCAGCTACGTCAAGGAGGTGAACTCCGCCAAGCGCCGGGCGCCGCTCCCGCTCGTCGTCGTCGTCGACACCATGCTGCAGATCGCGTGCGGCATGGCGCACCTGCACTCCAACAAGATGTACCACGGCAACCTCAACCCATCCAACGTGCTCGTCAAGCCGCGCCATGGCGACGCCTACCTGCATGTCAAGGTCGCCGGCTTCGTCTCCGGCTCCGGCACGGCGAACGCGGCCAACCCATGCATCTGGTGCGCGCCGGAGGTGGTGGGGAACGAGGCGGCGGCGACGGAGAAGGGCGACGTGTACAGCTTCGGGATGATCTGCTTCGAGCTGATCACCGGGAAGATCCCGTTCGAGGACAACCACCTGCAGGGGGAGAACATGAGCAAGAACATCCGCGCCGGCGAGCGGCCGCTGTTCCCGTTCCAGTCGCCCAAGTACCTGACCAGCCTGACGCGGCGGTGCTGGCACGGCGAGGCGGCGCAGCGGCCGCCGTTCCACTCCATCTGCCGCGTGCTCCGCTACGTGAAGCGCTTCCTGGTGATGAATAACCCGGAGCAGGCGGCGGCGGACGCGGCTGGAGCCGGGCCGGCGGTGGACTACCTGGACATGGAGGCGCAGCTGCTGAGGAGGTTCCCGGAGTGGGAGGGGAACGGTGTCGCCGACGTGCCGTTCGAGATGTACGCGTACAGGGTGATGGAGAGGGACAAGATGAGCAACGCGTGCAGGGACAGGAGCTCCGACTCCGGCAGCGACGGCAACTCGCTGTGGGGAGATGACAGCGCCAGCGGCGGGTCCAGCACGACGGCGACGGACGCGTCGGCGTCGAGCCGGCCGCTGCTTGACCGGAGCGGCAGCACGAGGTCGTCGCCGCCGCCGCCGCGGCGCAAGGTGGCCATCGCCGCCGCCAAGGCAGGCAAGTGTCGCAGCGGCATTGTTACTCGTCTAAAGCCTTCCTCCAAGATTACAGCTAGCTCCATGTCCGTGACGTGTGCAGGGCCGCCGCAGAAGTCGAGGTCGATGGGCACGGTGAGGCCGCCGCCGGTCGTGGCCCGCCGAACGCCGAGGATTAAGTCCGACGGCCACCTCAATAGGGCGGCAATTCCGCCTACCCGACGGCGTAAATCCGGCGGGAACGCTTCAGACTCGGAGTTAGCTTAG</cdnaseq>

Protein Sequence

<aaseq>MEQLRQVGEAIGGVNALMAFHDDLRCINPRQCALLAHAYALAFRAVAGELRARLRFHDRLTKWKPLDDPLRELHRVVRDGEAYIRHCLLLDPAHWWARAAAATHGTECVEHHLHNLLWCVSVVVEAVENVGEVTGSDPDELARRRLALARDYDKDLLDPKLFRERLGETFLATRELAARMDMAWKEDRWLLSQLLDERKGPTSSPEPPLTRQEHRLADLLAAPRGKLHPASVLLMSDFHMRRRLGGNGNLKEVQWLGEAFAVKHVVGVDAEAAAAEVAALASVSPHPNVAHCRYCFHDEEKRELYMVMDQLMSKDLGSYVKEVNSAKRRAPLPLVVVVDTMLQIACGMAHLHSNKMYHGNLNPSNVLVKPRHGDAYLHVKVAGFVSGSGTANAANPCIWCAPEVVGNEAAATEKGDVYSFGMICFELITGKIPFEDNHLQGENMSKNIRAGERPLFPFQSPKYLTSLTRRCWHGEAAQRPPFHSICRVLRYVKRFLVMNNPEQAAADAAGAGPAVDYLDMEAQLLRRFPEWEGNGVADVPFEMYAYRVMERDKMSNACRDRSSDSGSDGNSLWGDDSASGGSSTTATDASASSRPLLDRSGSTRSSPPPPRRKVAIAAAKAGKCRSGIVTRLKPSSKITASSMSVTCAGPPQKSRSMGTVRPPPVVARRTPRIKSDGHLNRAAIPPTRRRKSGGNASDSELA</aaseq>

Gene Sequence

<dnaseqindica>1..2109#ATGGAGCAGCTCCGGCAGGTCGGCGAGGCCATCGGCGGCGTCAACGCCCTCATGGCCTTCCACGACGACCTCCGCTGCATCAACCCTCGCCAATGCGCCCTCCTCGCCCACGCCTACGCCCTCGCCTTCCGCGCCGTCGCCGGCGAGCTCCGCGCCCGCCTCCGCTTCCACGACCGCCTCACCAAATGGAAGCCCCTCGACGATCCCCTCCGCGAGCTCCACCGCGTCGTCCGCGACGGCGAGGCCTACATCCGCCACTGCCTCCTCCTCGACCCGGCCCACTGGTGGGCGCGCGCCGCCGCCGCCACGCACGGCACGGAATGCGTCGAGCACCACCTCCACAACCTCCTTTGGTGCGTCTCCGTCGTCGTCGAGGCGGTCGAGAACGTCGGCGAGGTCACCGGCTCCGACCCCGACGAGCTCGCCCGGCGGCGGCTGGCGCTGGCCAGGGACTACGACAAGGACCTGCTCGATCCAAAGCTCTTCCGGGAGAGGCTCGGCGAGACGTTCCTCGCCACGCGTGAGCTCGCCGCCCGGATGGACATGGCGTGGAAGGAGGACAGGTGGCTGCTGTCCCAGCTTCTCGACGAGAGGAAGGGCCCGACATCGTCGCCGGAGCCGCCATTGACGCGGCAGGAGCACCGGCTCGCCGACCTCCTCGCCGCGCCGCGCGGGAAGCTGCACCCGGCGAGCGTGCTCCTGATGAGCGACTTCCACATGCGGAGGCGCCTCGGGGGGAACGGGAACCTCAAGGAGGTGCAGTGGTTGGGGGAGGCGTTCGCCGTGAAGCACGTCGTCGGCGTCGACGCCGAGGCGGCGGCCGCGGAGGTGGCGGCGCTGGCGTCGGTGTCGCCGCACCCGAACGTGGCGCACTGCCGCTACTGCTTCCACGACGAGGAGAAGAGGGAGCTGTACATGGTGATGGACCAGCTGATGAGCAAGGACCTCGGCAGCTACGTCAAGGAGGTGAACTCCGCCAAGCGCCGGGCGCCGCTCCCGCTCGTCGTCGTCGTCGACACCATGCTGCAGATCGCGTGCGGCATGGCGCACCTGCACTCCAACAAGATGTACCACGGCAACCTCAACCCATCCAACGTGCTCGTCAAGCCGCGCCATGGCGACGCCTACCTGCATGTCAAGGTCGCCGGCTTCGTCTCCGGCTCCGGCACGGCGAACGCGGCCAACCCATGCATCTGGTGCGCGCCGGAGGTGGTGGGGAACGAGGCGGCGGCGACGGAGAAGGGCGACGTGTACAGCTTCGGGATGATCTGCTTCGAGCTGATCACCGGGAAGATCCCGTTCGAGGACAACCACCTGCAGGGGGAGAACATGAGCAAGAACATCCGCGCCGGCGAGCGGCCGCTGTTCCCGTTCCAGTCGCCCAAGTACCTGACCAGCCTGACGCGGCGGTGCTGGCACGGCGAGGCGGCGCAGCGGCCGCCGTTCCACTCCATCTGCCGCGTGCTCCGCTACGTGAAGCGCTTCCTGGTGATGAATAACCCGGAGCAGGCGGCGGCGGACGCGGCTGGAGCCGGGCCGGCGGTGGACTACCTGGACATGGAGGCGCAGCTGCTGAGGAGGTTCCCGGAGTGGGAGGGGAACGGTGTCGCCGACGTGCCGTTCGAGATGTACGCGTACAGGGTGATGGAGAGGGACAAGATGAGCAACGCGTGCAGGGACAGGAGCTCCGACTCCGGCAGCGACGGCAACTCGCTGTGGGGAGATGACAGCGCCAGCGGCGGGTCCAGCACGACGGCGACGGACGCGTCGGCGTCGAGCCGGCCGCTGCTTGACCGGAGCGGCAGCACGAGGTCGTCGCCGCCGCCGCCGCGGCGCAAGGTGGCCATCGCCGCCGCCAAGGCAGGCAAGTGTCGCAGCGGCATTGTTACTCGTCTAAAGCCTTCCTCCAAGATTACAGCTAGCTCCATGTCCGTGACGTGTGCAGGGCCGCCGCAGAAGTCGAGGTCGATGGGCACGGTGAGGCCGCCGCCGGTCGTGGCCCGCCGAACGCCGAGGATTAAGTCCGACGGCCACCTCAATAGGGCGGCAATTCCGCCTACCCGACGGCGTAAATCCGGCGGGAACGCTTCAGACTCGGAGTTAGCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020456