BGIOSGA020470

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Revision as of 03:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020470| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020470, complete gene.| tag = OS05G05...")
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Gene Name

BGIOSGA020470

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020470, complete gene.

LocusTag

OS05G0589200

Ensembl Transcript ID

BGIOSGA020470-TA

Ensembl Protein ID

BGIOSGA020470-PA

Length

2278

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30700239..30702516

Sequence Coding Region

30700239..30700353,30700502..30700653,30700727..30701281,30701376..30701603,30701692..30701832
,30701922..30702122,30702235..30702516

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30700239..30702516 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30700239..30702516 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTTGCAGATGATGCGTGGTAGGCCCTGCGCCCCGTGCTGTTCGTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCGTCCTGGATGCCCTCCAAGCATCCTCACGCGCCATTGAGTCGAAGGAAAATCTCATCTGAGTCACTTAGAGCATTGGCCTTGCACCTCTTGCTCAAACGTCGGAAATACCAAAATGGGGATATCTCAAGGATTTCAGCATCTTCGTCCGGTGTGCTTGAAATCACCGAGAACAAGTCCAATAACAAGGCTGATGCAGAAAGAAAGATCCTTGATGATGCTCTTGACAGAAAGCCGCAGATTGACTGGGTTGAAGAAGATATCTCTTCTTGGATGGATAAGAGTTACACAAGCAGCAATTTGGAGTATAACTTATTAATGCAAAACATTCAGGTCTTAGAAAGTAGTTTGGCTGGTAAAGACTTGGTAAGGCTGGAAAGAGATATCCTTGTACATATCGAACGGCTGGGAGCTTTGAAATCATTCAACGCGTCTATCTCCAGGGCCACTCTAACACAAACATATGAATCAGAGTTTTCACTTCCTGGGAATATTATTAAGCTTGATCCAGAGATTCCTCTCGAGGAGCAAAATGTTGTGGTAATTGTTCGAAGTGGGAAAAGTCAAGAGAGGAAACTGAAAAGAATGAAAGCATCAGAAAAGGGCTCTCGGGTCTCCGTGAAAACACCCTCACGAAAATCAAAGAAGTCCAGTAGTAGTCAATTTATAGCTGAGTGGAAAAACTATCCAGGCCGAAGAAGGAGCATTGTACGAGAACAATCAGCATTGCTGGTTACTATCAAGGAGTGTGCAAACCTTGAGAAAATAAGAGAAAACTTGTTGAAGGATGGGAGTGAAGTCAGCCATGCAAGCTGGGCCAAGGCAGCTGGAATTGATGAAGCATTGTTGAGGAGTAGGCTGCAAGAAGGTTACTGCTGCCGAGAGAGATTACTGGTAACCACCGAGTGGCTAGTCAAGTACATTGCAAAGACATACGCTGGAATGGGAACAGCTTTTGAGGATCTACTGCAGGCTGGGAAAATGGGTGTCCTTAATGGTGCTGAGAAATTCGACAGCCAAAAAGGATGCAAGTTCTCAACTTATGTGAAGTACTGGATAAGGAAAGCAATGTTAGCACTTCTTGCTGAAAACTCTGGAGTAATCCAGCTGCCCGCAAGGATGGAGGGTATAATTCGTAAGGTCAGGGAAGCGAGAAGGGCGATTCGCTACAACACAGGGAGGAACCCACCAGATGCAGAAATCGCAGCCCTCATCGGTGTATCAGTTGCCAATGTTAGGTTGGCACGGAAATGCTCTCGTCGAGTTGTGTCGCTTTACACAGAGATCGGAGTTGGACAGAATGCAAAATTTGTGGAAGTGACTCCGGACACATCTTTAGAAGCTCCAGATGAGGCTATGTTCCGGATGCAGTTGAGAGAGAGACTGCTTCATGTCCTGGACAGGCTCCCCCCAAGAGAAGGGCACGTACTGAAGCTGCGGCACGGGCTGGAAGATGGGAAATGCAGGTCCCTGGAGCAGATTGGGAGCATTTACCATGTCTCCAAGGAGTGGATAAGGAAAATAGAGAAGTCGGCCATGTCCAAGCTGAGGAACGACGACGTGCATAATGAACTCAAGGACTTCTGTGGATTCTAG</cdnaseq>

Protein Sequence

<aaseq>MGLQMMRGRPCAPCCSSSSSSSSSSSSSWMPSKHPHAPLSRRKISSESLRALALHLLLKRRKYQNGDISRISASSSGVLEITENKSNNKADAERKILDDALDRKPQIDWVEEDISSWMDKSYTSSNLEYNLLMQNIQVLESSLAGKDLVRLERDILVHIERLGALKSFNASISRATLTQTYESEFSLPGNIIKLDPEIPLEEQNVVVIVRSGKSQERKLKRMKASEKGSRVSVKTPSRKSKKSSSSQFIAEWKNYPGRRRSIVREQSALLVTIKECANLEKIRENLLKDGSEVSHASWAKAAGIDEALLRSRLQEGYCCRERLLVTTEWLVKYIAKTYAGMGTAFEDLLQAGKMGVLNGAEKFDSQKGCKFSTYVKYWIRKAMLALLAENSGVIQLPARMEGIIRKVREARRAIRYNTGRNPPDAEIAALIGVSVANVRLARKCSRRVVSLYTEIGVGQNAKFVEVTPDTSLEAPDEAMFRMQLRERLLHVLDRLPPREGHVLKLRHGLEDGKCRSLEQIGSIYHVSKEWIRKIEKSAMSKLRNDDVHNELKDFCGF</aaseq>

Gene Sequence

<dnaseqindica>1..115#264..415#489..1043#1138..1365#1454..1594#1684..1884#1997..2278#ATGGGTTTGCAGATGATGCGTGGTAGGCCCTGCGCCCCGTGCTGTTCGTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCGTCCTGGATGCCCTCCAAGCATCCTCACGCGCCATGTGAGTTACCTTCTGCATCTTCCTTTTCTTTCCCCCCACTGCTATAGTATTCCCCAGGCGGAAAAAATAACTTATTTTTTATGTAAAAATGCATTGGTACTTTGAGCAATTTGCCAGCGGAATCTAAAGTTCCAAACTTCTAATGCAGTGAGTCGAAGGAAAATCTCATCTGAGTCACTTAGAGCATTGGCCTTGCACCTCTTGCTCAAACGTCGGAAATACCAAAATGGGGATATCTCAAGGATTTCAGCATCTTCGTCCGGTGTGCTTGAAATCACCGAGAACAAGTCCAATAACAAGGTCCTCACTTAAATCCGTAATCCATGTACGACTCATTTTTGTCTGTTGATAATGATTGCAACATGAATTTCAGGCTGATGCAGAAAGAAAGATCCTTGATGATGCTCTTGACAGAAAGCCGCAGATTGACTGGGTTGAAGAAGATATCTCTTCTTGGATGGATAAGAGTTACACAAGCAGCAATTTGGAGTATAACTTATTAATGCAAAACATTCAGGTCTTAGAAAGTAGTTTGGCTGGTAAAGACTTGGTAAGGCTGGAAAGAGATATCCTTGTACATATCGAACGGCTGGGAGCTTTGAAATCATTCAACGCGTCTATCTCCAGGGCCACTCTAACACAAACATATGAATCAGAGTTTTCACTTCCTGGGAATATTATTAAGCTTGATCCAGAGATTCCTCTCGAGGAGCAAAATGTTGTGGTAATTGTTCGAAGTGGGAAAAGTCAAGAGAGGAAACTGAAAAGAATGAAAGCATCAGAAAAGGGCTCTCGGGTCTCCGTGAAAACACCCTCACGAAAATCAAAGAAGTCCAGTAGTAGTCAATTTATAGCTGAGTGGAAAAACTATCCAGGCCGAAGAAGGAGCATTGTACGAGAACAATCAGCATTGCTGGTTACTATCAAGGTACTCTTCATCATCAGCATATTTATTCCTTTTAGCAGTCAATTATTGTTAACCATAACATATCCTTCATGGTTTTATTCTTACTGTTCTCTAGGAGTGTGCAAACCTTGAGAAAATAAGAGAAAACTTGTTGAAGGATGGGAGTGAAGTCAGCCATGCAAGCTGGGCCAAGGCAGCTGGAATTGATGAAGCATTGTTGAGGAGTAGGCTGCAAGAAGGTTACTGCTGCCGAGAGAGATTACTGGTAACCACCGAGTGGCTAGTCAAGTACATTGCAAAGACATACGCTGGAATGGGAACAGCTTTTGAGGATCTACTGCAGGTTGAGAGATAACATATTTATTGAGAAAAAGGTAGACTACATTGACAACTTCCATTTTACAATTTGATTTGTTGGAATGACACTGCAGGCTGGGAAAATGGGTGTCCTTAATGGTGCTGAGAAATTCGACAGCCAAAAAGGATGCAAGTTCTCAACTTATGTGAAGTACTGGATAAGGAAAGCAATGTTAGCACTTCTTGCTGAAAACTCTGGAGTAATCCAGCTGCCCGTATGCCTCTGAAACTATCTTGATATGCTTCACTTTGTTTCATGAGAAAAATCATTGCTTAATGATGTGAACTGGCAATGCAAGTGTAGGCAAGGATGGAGGGTATAATTCGTAAGGTCAGGGAAGCGAGAAGGGCGATTCGCTACAACACAGGGAGGAACCCACCAGATGCAGAAATCGCAGCCCTCATCGGTGTATCAGTTGCCAATGTTAGGTTGGCACGGAAATGCTCTCGTCGAGTTGTGTCGCTTTACACAGAGATCGGAGTTGGACAGAATGCAAAATTTGTGGTGAGCTTCTCAGCCCTGTGATTGACCGATGATAAAAAATGACAAATAGTTCTTCCATCACCCGTTGATGGTTTATTTTGACGTATACAATCTGAATGGTGTTTAATTGCAGGAAGTGACTCCGGACACATCTTTAGAAGCTCCAGATGAGGCTATGTTCCGGATGCAGTTGAGAGAGAGACTGCTTCATGTCCTGGACAGGCTCCCCCCAAGAGAAGGGCACGTACTGAAGCTGCGGCACGGGCTGGAAGATGGGAAATGCAGGTCCCTGGAGCAGATTGGGAGCATTTACCATGTCTCCAAGGAGTGGATAAGGAAAATAGAGAAGTCGGCCATGTCCAAGCTGAGGAACGACGACGTGCATAATGAACTCAAGGACTTCTGTGGATTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020470