Os12g0109200

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Revision as of 10:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0109200| Description = Similar to Ca(2+)-dependent nuclease| Version = NM_001189826.1 GI:297728782 GeneID:4351283| Length = 4376 bp| Defin...")
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Gene Name

Os12g0109200

Description

Similar to Ca(2+)-dependent nuclease

Version

NM_001189826.1 GI:297728782 GeneID:4351283

Length

4376 bp

Definition

Oryza sativa Japonica Group Os12g0109200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:493933..498308

Sequence Coding Region

493956..494186,494869..494924,496101..496200

Expression

GEO Profiles:Os12g0109200

Genome Context

<gbrowseImage1> name=NC_008405:493933..498308 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:493933..498308 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaacatcctccggtgcttcaagggagacgacgatggcggtgatcactacccctactacaagccaacctccagaccacactaccagcctcctcactaccatggtcaacctgcagcccccccagctccaccccagcagcagcctctcggcccccatggcgtcacgccgtccaccgtcggcgtcgccgccctggcgcacgacctcctcaacttcgaatccacatccatggttcctgatggcctcagtcagcacgttgtatcatccaggaaagcacaggttaaatgggcattcttgaattttacaactttccgatcccatcactcccctcagcatcgtcaaactaccaaccatcctcgctaccagagggcgtgcagtttgtgctaa</cdnaseq>

Protein Sequence

<aaseq>MGNILRCFKGDDDGGDHYPYYKPTSRPHYQPPHYHGQPAAPPAP PQQQPLGPHGVTPSTVGVAALAHDLLNFESTSMVPDGLSQHVVSSRKAQVKWAFLNFT TFRSHHSPQHRQTTNHPRYQRACSLC</aaseq>

Gene Sequence

<dnaseqindica>24..254#937..992#2169..2268#gctgaaacaatagaggagcatccatggggaacatcctccggtgcttcaagggagacgacgatggcggtgatcactacccctactacaagccaacctccagaccacactaccagcctcctcactaccatggtcaacctgcagcccccccagctccaccccagcagcagcctctcggcccccatggcgtcacgccgtccaccgtcggcgtcgccgccctggcgcacgacctcctcaacttcgaatccacatccatggtaacttctacacatgcaactcacctagctcctagctacatgcccttactcccactttcctctttcattcagtttgcaactatactaattagaggttactgtacgcctgacattaatctatcagcatgcatttacatcctaattagaggttatccaattacagtacaaaggtttctgttgtgtgttctatggcaaaaattgggtttggagtatgaaaatttataggtgttaattgcatcacatatgtaactttgctcagccttgaacccctctgcaattgaaaccaatcttttgttactgaagctagagcaatacttacaatattcctttttattggatttatcctgttatatgtgattaattcagtcatttttgtaaggggtttagtgtatcgtaaaccaacctgattataagcacactttcgtctttttttcccttaatcacactttcgtcttttttccccctctgtttcttttggaatagtgatgaatatcttgtatctggactgaaaaaatatgctgcattgcggtaataccatttctgttagcacttgcaaacatgttcatattctaatggcgcatcatgccaagttcaattactcctttattcccagtttttatttactgttcttctcccatgattagacatgtataaagtaagtattcattttccatattatcaggttcctgatggcctcagtcagcacgttgtatcatccaggaaagcacaggttaaatggtatggatcagctctaaaagtctttgtagagttgatattttttttaagattttgtacgtttggtgtacctactgatatcaaaatcgctttgattcctctaatactaagattaattgaatcaaggtttatgagttaaggctgtaaaataaataaataaataaataaatgattggttactgttgtactagcttaagttgggcttttttactaaatgattttatgactgtgaggttaaatgattttgatttgctatcctaggataggatgttccatactcgttcatatgtagacaaatccttatttgagaaggtgaaaataaaaaaagaacagcattgaaacatacaagcaaaagttgatgcactactagtatggtctatttgtccaggctacctcaggtgttgataaactaaaaccttctagcttgcttaaaacagagaggaggataagagtacgcaatggttggagtttgggactcagaaaattcttaccaaacgaaatgtagagttacatattcacatggcagttgaaattgattaagatacattgtgttcttggctacatttctggtacattctctagaagactcaggctaaattcgaaatcagccatgttgacatacaagtttcggtcttgaattcttttacatattttagcaggatagaatttcaagtagcgtagaggcatgtataatatggttcttgttccaatggtatgttatactgtcagtaatgaccagtttgtcacaaagcaaaagtattaggcaaatcttgcaattaacagctagtatatatgatattaatacaacttccactgaacaaacttcaaacgaatgtttgatctgatatcttaattggaataataataggtaccagaaactgttggaggcgtataagaatacaacaccgccaccaaaaacaccagcagatgctgctcagctaattgcaagagcccttaatatgatccagagagctgatttggagataacttcgttttatattttgatattctgaatagttcaatctgagagaacacagaacaattcattaatcaaaggatcattttttacaaactgaaattatcaatcaaagcaattcactgcaatttgtattatttctattgcttaaattggctatagatactctactcacctcatctagaaactatgtttcccctcagggcattcttgaattttacaactttccgatcccatcactcccctcagcatcgtcaaactaccaaccatcctcgctaccagagggcgtgcagtttgtgctaaacactttgccggtacggtgtgatcaactattacaactattctgaataataggtttatcaccaagaatccgacatcacacgttgaacaatgatttacataattgtcaataaatgctaactctcacatatcactgatattatcaggtttatgacaagtgcattggagatggtgatggatttactgcatatgtttccacaacagatccgagggaatctgcaaatgtgccattggaagtgcatgagttggtgatagcaagaactcaagcacgcaaatgtagggattaccagagtgctgatgctcttctaagcagccttgatgaagctggatacaagtatggaaactgatatgttctgatccttatcagttaataccacaagattgcatatctgaatgccgcatcttctaattttatatacaagagttattgtcctaattttctgaatattgtcttttcatggaacaatgcaggatgcctaatatagtaggcactggaaaataacagagcttagaaattaaattgatttttcttctaataattaaaattaacacacaatccttgatatgtatataaatgctctcattgtccccacgcagttgacacatgcatttatgcattttaggaacaaaactgtgaagatttttatagcagctattcatgattaaatgtggacagtaattacatcagttcgatttggtttaatcacatatatgtgctagctttgcttggagatcacaggaaaacatggcttactatgaattttgatgagcaggataatatcttgttcagatgatgaggtcctcgcaaggaaatacagaataagaatgaggtaggtatctacattgcacctctagatcgaataaaaatttgatgtactactgtgaggtgtgaaatgcatgatcttttctaatttctatattaaaggggaattgatgcaccggagcttaagatgccatatgggagggaatcacggaatgcattggtgaaactaattggtgggaagagcgttaaaatttatgtctatgatctggaccagtttgggcgctacgttggtgatatctattgcaataatttgttcattcaggtgaaacataacctatttcatcagtacctccacaactccacatgtatcatgattttactgcttcaactcttatgagaaattgtgtgctctcttttgagtccttcaggagcaaatgctgaagaatggccatgcatggcacttcaagacttatgataaacgcccagagtttgcaagagtaagagattctactatattgtgtagttacttgttttgctctttgacagattttcttttacataaactttgtcgagtcatgcttacatatgttgttatttctggctaaaaagagtgaattgcactttgggccatgttttattaccaaagtttcactttggaccaccctgtacgtaatcttttcactttggactaggtaactttacttttgttgcacaatggactaccctaactcttttcgcttgtgatgtctagcgtctctttcgacaaaagtatgtcatgtatataggtatgaaagtttgctggcatgtcgttaacaatttgctcgaagtcatcgaagaaatgaaaatgtgttttggggtggtccattgtgcaacaaaggtaaagttacctagtccaaagtgaaaagattagataaagggtggtccaaagtgaaactttgacaataaaacatggcccaaagtgaaattaacttgggtaaaaaagggttgttcacttattccctgattatgtagtgggagagagaggcaaaagctgcaaaccgagggctttgggcgtcagggaatcctgagaaaccatgggattggagaagagaccaacgcaacgcaagacaggacgccattcaggtgtactgaaagttgagtctccagcactcatttggccacaaatgtgcatatatgtgtaattgggtaacgttgttgttgagtagctttgcttgcaatgaatgtgtcagaaaccaaaagccaaaatgtatgtgtggtttatgttgtacgaaagagattatatatccaggagtcagctgtgccgtgtgatgtggaggtgaaatgtggtcaatgcaagtgagctttgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0109200, RefSeq:Os12g0109200