BGIOSGA020484

From RiceWiki
Revision as of 03:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020484| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020484, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020484

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020484, complete gene.

LocusTag

OSJNBA0030I14.5

Ensembl Transcript ID

BGIOSGA020484-TA

Ensembl Protein ID

BGIOSGA020484-PA

Length

6378

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30950264..30956641

Sequence Coding Region

30950264..30950577,30950916..30951062,30951604..30951739,30952048..30952149,30952751..30952870
,30952983..30953063,30953528..30953868,30954019..30954264,30955145..30955469
,30956073..30956306,30956387..30956641

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30950264..30956641 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30950264..30956641 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACTGTTTCTGACATCGGCCTCTCCGCGGCTATCAACGTCTCGATGGCCGTTGCATTCTTGCTGGTCTTTGCTTTTCTACGATTACAGCCCATCAACGATAGGGTTTACTTTCCAAAATGGTACCTCAGAGGAATGAGAGACAGCCCTGTTTCCTCTGGTGCTGCAGTGCAAAAGGTTGTCAATTTAAACATGAGATCATACTTGAAATTTTTAAGTTGGATGCCGGCTGCTCTCAAGATGCCAGAGGATGAGTTGATCAATCATGCAGGCCTTGATTCCGCTGTCTATCTACGGATATACCTAACAGGGATCAAGATATTCGTTCCAATATCAATTTTAGCTTCGCTTGTTCTGTTCCCTGTGAACTGGACAAATGACACCCTAGACAGCATGAAGGTAGTCCACAGTAAAATTGACAAACTTTCAATATCAAACATACCTTATGGGTCAAACAGGTTTGTTACTCACTTGGTTATGGCTTATGCTGTCACGTTTTGGACCTGCTATGTACTGTTCCGAGAGTATGAGATAATTACAACGATGAGATTGCGGTTTCTTGCTTCAGAGAAACGGCGACCAGACCAGTTTACAGTTCTTGTGCGGAATATACCTCCAGATCCTGATGAATCAATTAGTGAGCTCGTGGAGCATTTCTTCCTTGTTAATCATCCTGATCATTATCTAAGACACCAGGTGGTTTACAATGCAAATAAACTTGCTGATCTGGTTGAGAAGAAGAAGAAACTGCAAAATTGGCTTGATTACTACCAGCTCAAGTATGAAAGAAATCCATCAAAAAGGCCCACCACTAAGACTGGCTTTCTTGGCTGTTTTGGTTCCGAGGTGGATGCCATTGAATACTACAAAGCAGAGATTGAGAAGATTGGGAAAGAAGAAGCTGATGAGCGTCAAAAGATCATGAAGGATCCCCAGTCAGCTGTTCCAGCAGCCTTTGTTTCATTTCGTTCACGGTGGGGGGCTGCTGTTTGTGCTCAGACACAGCAAACCAGTAATCCAACAGTCTGGATAACTGAATGGGCTCCAGAACCTCGTGATGTCTACTGGAATAATCTATCCATTCCATTTGTGTCCCTCACAGTTAGGAGGCTGATAGTTGCTGTGGCATTCTTCTTCCTCAACTTTTTTTATGTCATTCCAATAGCATTCGTGCAATCTCTTGCAAGCCTTGAAGGAATAGAAAAGGCGCTTCCATTTCTGAAACCCTTAATCAAAATTGATGTCATCAAATCATTCATCCAAGGTTTTCTTCCAGGAATTGCTTTGAAGGTCTTCCTTATATTGCTTCCAACTATACTGATGTTTATGTCTAAGTTTGAAGGATTAATATCACAGTCATCACTGGAGCGAAGATCTGCATCTAAATATTATATCTTCTTGTTCTTCAATGTATTTTTGGGAAGCATCGTTACAGGATCTGCTTTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGAAATACCGAGAACCATCGGTGTAGCCATTCCAATGAGGGCGACTTTTTTCATAACATATGTAATGGTTGACGGTTGGACTGGTGTAGCTGGTGAAATATTGAGATTGAGGGCACTTATAATCTTCCATTTGAAAAACTTTTTCTTGGTGAAGACTGAAAAGGACAGAGAAGAGGCAATGGATCCTGGTAGTATCTGTTTTGATTGGTGTGAACCACGTATACAGCTATATTTCTTACTTGGCCTTGTCTATGCTGTGGTGACACCGTTATTGCTTCCTTTCATATTGGTATTCTTCGGGCTGGCATATGTTGTCTACCGCCACCAGATAATAAATGTCTACAATCAACAATACGAGAGTGGTGCACAGTTTTGGCCGAGTGTGCACGGGCGCATAATCATTGCATTGATCGTATCACAGCTACTTCTTATTGGACTGTTGAGTACAAAAGGTTTCGAGGAGACGACACCAGTTCTTGTTGTTCTTCCTGTGTTGACGTTTTGGTTTTACAAGTACTGCAAGAACCGGTTTGAGCCTGCATTTGTGAGGAACCCACTACAGGAAGCGATGAGGAAAGACACCCTGGAACGGGCAAGGGAGCCAACCTTCGATCTGAAAGCGTACCTGGCCAATGCGTACCTGCACCCGGTGTTCAAAGGCAGGGAGGAGGAGGACAATATGTCAATATCCGAGGATGTCGGGATGGAGGAGGTGATCGTGCCGACCAAGCGTCAATCTCGCCGGAACACTCCCGCCCAGAGCAAGTACGAAGGCTCCGACACGCTCTCTCTTCCTGAAACTGTACACGAACGATAG</cdnaseq>

Protein Sequence

<aaseq>MATVSDIGLSAAINVSMAVAFLLVFAFLRLQPINDRVYFPKWYLRGMRDSPVSSGAAVQKVVNLNMRSYLKFLSWMPAALKMPEDELINHAGLDSAVYLRIYLTGIKIFVPISILASLVLFPVNWTNDTLDSMKVVHSKIDKLSISNIPYGSNRFVTHLVMAYAVTFWTCYVLFREYEIITTMRLRFLASEKRRPDQFTVLVRNIPPDPDESISELVEHFFLVNHPDHYLRHQVVYNANKLADLVEKKKKLQNWLDYYQLKYERNPSKRPTTKTGFLGCFGSEVDAIEYYKAEIEKIGKEEADERQKIMKDPQSAVPAAFVSFRSRWGAAVCAQTQQTSNPTVWITEWAPEPRDVYWNNLSIPFVSLTVRRLIVAVAFFFLNFFYVIPIAFVQSLASLEGIEKALPFLKPLIKIDVIKSFIQGFLPGIALKVFLILLPTILMFMSKFEGLISQSSLERRSASKYYIFLFFNVFLGSIVTGSALDQLKAYIHQSANEIPRTIGVAIPMRATFFITYVMVDGWTGVAGEILRLRALIIFHLKNFFLVKTEKDREEAMDPGSICFDWCEPRIQLYFLLGLVYAVVTPLLLPFILVFFGLAYVVYRHQIINVYNQQYESGAQFWPSVHGRIIIALIVSQLLLIGLLSTKGFEETTPVLVVLPVLTFWFYKYCKNRFEPAFVRNPLQEAMRKDTLERAREPTFDLKAYLANAYLHPVFKGREEEDNMSISEDVGMEEVIVPTKRQSRRNTPAQSKYEGSDTLSLPETVHER</aaseq>

Gene Sequence

<dnaseqindica>1..314#653..799#1341..1476#1785..1886#2488..2607#2720..2800#3265..3605#3756..4001#4882..5206#5810..6043#6124..6378#ATGGCCACTGTTTCTGACATCGGCCTCTCCGCGGCTATCAACGTCTCGATGGCCGTTGCATTCTTGCTGGTCTTTGCTTTTCTACGATTACAGCCCATCAACGATAGGGTTTACTTTCCAAAATGGTACCTCAGAGGAATGAGAGACAGCCCTGTTTCCTCTGGTGCTGCAGTGCAAAAGGTTGTCAATTTAAACATGAGATCATACTTGAAATTTTTAAGTTGGATGCCGGCTGCTCTCAAGATGCCAGAGGATGAGTTGATCAATCATGCAGGCCTTGATTCCGCTGTCTATCTACGGATATACCTAACAGGGTCTGTTCCTTTCCATCTTTTATGTTTCTGCTCTTCTCAATTGTTCCTTGTTGCCATCTCATTTTTTGTTCCAAGTCATACTTGTGGAAATAATGCCAATTAGTTAATGATACAGTGAGCATTTAATCCAATGGGTAAAGGCCTGCGGCTTCACTTTGTTATTGTTTCTAAACAATAAGAGATGCTAATGAAGAAATGATGAGCAAATTTATCACTCTGCATTTTTCCCATGTTAATTTAAACCTGAGAATATGAATCGTATCATTGTTGTCAAAATCTATTTGTGCCTAACTTCAATTATGCCTGTGTATTGATATACCTGTATTGACCTTTTACAGGATCAAGATATTCGTTCCAATATCAATTTTAGCTTCGCTTGTTCTGTTCCCTGTGAACTGGACAAATGACACCCTAGACAGCATGAAGGTAGTCCACAGTAAAATTGACAAACTTTCAATATCAAACATACCTTATGGGTCAAACAGGTAAGCCTCCATAAATCATTTGATATCTGGATGCGGTGTATTTTGATGAGTTGTGTAGAGATAAATGTTTCTTTTTTTGGTCTGGTTCAATATAAATTGTACGTAAAACATCAATAAGATTGCCCATTGGTCCACCAATTACACAAACAAAATCTGTATAGTGATTCATTTTACATGCAGATTCAACCTTTTTAAGTTTTGGGCGGCACCTGAAATCCAACCACTTTTACTTATCTTCATGCTGATTATGCACATGTACTTGGTACAATTTTTAGGAGCATTATCATCTTATGGTTTTGGGTGATTTGATAAATATGCCACTTGCCTGTGTGACTGTCTAATTTAGTAAGGTACAAGCACTCTATTTTGGCCTGTGTGCTTGGGACTTAGCAGCTGCCCTGCCAAGTTCAATATTGGGTGGCAGTTGCTCTGGTTGAAAATAAATTCATCCACACTGAACTTCTAGGTTTCATTTATTAATTTCTGTTGATGCTAGCACATGTCTTTGCTGTTCATGATGAACATTCCATCTGTTTTACAGGTTTGTTACTCACTTGGTTATGGCTTATGCTGTCACGTTTTGGACCTGCTATGTACTGTTCCGAGAGTATGAGATAATTACAACGATGAGATTGCGGTTTCTTGCTTCAGAGAAACGGCGACCAGACCAGTTTACAGTATGATCTTGTCAACTTTGCAAATCCCCTCTCTATTTAGTACCAACATGTTTACATTGGATCCACAAGAAGGGTAAAAAATTGTAATATTAATGGACTGAAACTATTCACCACTGGAAATAGTCTAAGAGATTGTGGCTAAGCATTTTGTCTCTGAGCACCCTGATACTCACTTTGCACTGACTTGGTTTATATTATCTAAAGCAATGTTGTAGACGGGAATGGTTTCATATCTCAATTGAATAAACACGATGAGTTAATTTCCTTCTGGTTGGTTTGTTGAATGCACCTCAAATGATTTATTTTAGGTTCTTGTGCGGAATATACCTCCAGATCCTGATGAATCAATTAGTGAGCTCGTGGAGCATTTCTTCCTTGTTAATCATCCTGATCATTATCTAAGACACCAGGTAATCTTTGGTAAAAATTTGTGGATAACTAAGTCAGATGTAGTTCTGTTGCTTTTCTCTTCTGGGGGTTTCAACAGGTCATCATCTGCTTAGGTAGGAGCTGTGTTTCTAGTTATGCTGATTGGCCTAATGCAAATAGATTTTTTTTCTACTCAACAGAACCCCCTTCATATATTATCCTTTTCCCACAAATTATTGATGGTTTCAAATGAACCTAATATTAATGTTTGCTAGTTTCATGTTGAGATTTTTTCCCCCAGATTCTGAGAATAGTCCACATAATAGCCTACCCACAGATTATTTGGATATTAATACATAAATATTTTGGTTTTGCCAAGTAACAGGAAAGTTATGATCTCTTGGTTATCTAGATTTTCATTTAAATAATCATATTCATATGTTAAAGGGTCTAAAAACTGTCTCTCTGTGCTAACACTTCACAGTGCTAATTGCTGAATGAGATTTAGAAGGGTCATATCCAAATTTGTGTATCATATGCACTTGGGTTTTCTACCCTGACTTCATTGATTTTTTTATTCTTCCTTATACTAATTACTGTATTTATTCCGTCCTTTTTCTGGCCGATTGTCTATATCTATAGGTGGTTTACAATGCAAATAAACTTGCTGATCTGGTTGAGAAGAAGAAGAAACTGCAAAATTGGCTTGATTACTACCAGCTCAAGTATGAAAGAAATCCATCAAAAAGGCCCACCACTAAGGTTAGTCTGCCATATGGACCTTGATCAATTTATTTTTCATTTCAATTATAATATTACATTAGGATCTTTTTTCTTTTTAATTCTCTGTCCCCCTGTTGGATTTTTGTTCCAGACTGGCTTTCTTGGCTGTTTTGGTTCCGAGGTGGATGCCATTGAATACTACAAAGCAGAGATTGAGAAGATTGGGAAAGAAGTAAGTTGTACTCCCTCCGTACCGTAATATAAGGGATTTTGACTTTTTGCTTGCACTGTTTGACCACTCGTCTTATTCAAAAAATTTGTGCAAATATAAAAAACGAAAAGTTGTGCTTAAAGTACTTTGGATAATAAAGCAAGTCACAAATAAAATAAATAATAATTCCAATTTTTTTTTAATAAGACGAGTGGCATTTTTGTCTATTAATTCCAAATAAATAATAATCCCTTATATTACGGGACGGAGGGAGTAGTATTTTTGTCTATATAATCATTGGACCATTCGGCATTGTCCATTTTTTCTGATTGAGTTGTATCATTCTATGAACATGGGTTTGCACAATCGATTCTTTTTTAGGATTAGTATTATGTCTAAGCATCACACATTCACACCTTGTGGGAGTTTAATTTGTTTACAGCTAACAGTCAGATAACAATAAATTCATGTGTAACAACATGCAGGAAGCTGATGAGCGTCAAAAGATCATGAAGGATCCCCAGTCAGCTGTTCCAGCAGCCTTTGTTTCATTTCGTTCACGGTGGGGGGCTGCTGTTTGTGCTCAGACACAGCAAACCAGTAATCCAACAGTCTGGATAACTGAATGGGCTCCAGAACCTCGTGATGTCTACTGGAATAATCTATCCATTCCATTTGTGTCCCTCACAGTTAGGAGGCTGATAGTTGCTGTGGCATTCTTCTTCCTCAACTTTTTTTATGTCATTCCAATAGCATTCGTGCAATCTCTTGCAAGCCTTGAAGGAATAGAAAAGGCGCTTCCATTTCTGAAACCCTTAATCAAAATGTAAGTGTTTCTTCATGTGTTGATTATTTATACTATTATTGCATTTCCATGATTTATTCAGCGTGTAATTAATTTGGGTACATTAGACATATGGTTATCTTCTGCTATTCTTTTGAAATGCCCTGATAAATCTTGTTGACTATTGTGCAGTGATGTCATCAAATCATTCATCCAAGGTTTTCTTCCAGGAATTGCTTTGAAGGTCTTCCTTATATTGCTTCCAACTATACTGATGTTTATGTCTAAGTTTGAAGGATTAATATCACAGTCATCACTGGAGCGAAGATCTGCATCTAAATATTATATCTTCTTGTTCTTCAATGTATTTTTGGGAAGCATCGTTACAGGATCTGCTTTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGAGTAAGTACTCCTATGCCGCCAACTCTACCGACTTGAAAGTTTAGAGATTATATACATGCTTGGTTGTTCATTTGAGTCTTCCCATCTTTTAATAGGATGCAGTTTATTTTTCCTGCTTCGCGGATCTCTGTTTGTTGACAATTGTATTTTTAGCAATTAATTATGGGAGAACACAGAAAAATCTGGTTCTTGTCGGAGATCACTTTGTTCATGCCGGCTGTCAAATAGATACCAAGTTCTTAATTCTGTTTTGATTAGTACTGTGGATTATATATTCAGGAGCTACACTTTGTTTGAATATTTAGACACATAGGCTAAATCAAATATGAAAAAATGGGACCAATCTAGGAAGGACTAGATTGATTTTGAATTAAGGAGGGGGTGAGGCTCGAACCCGGACCGGCTAGCTCGCAGCTTGCGTTGCTAGCCGGGAAGGCCCCGGGCCTTTCTCCTTAATCAAATATGTCAAGCAGTGAATTATGATATACATTCTTATTAAATAAAACATGTGCTGGTGGTTCAAATAACATCATGAACTCGTGATATATTGGTTCTTAAGCTATCTTAGAAATAGATAAATTCTTTTGGTTACAGTGAGTTAGACATAAATAGCAACATAATGATGCTTAATAGGCAAAAGGGGGGCCATTTGTTGATAGGCTAACTCTGTAGATGCAGAGATTTTGGCATCAAGGCAAACGCCAAAGCATGGGCCTCAGATACTTACCTCGTGGAAACTCAGATCGTATTTATGCTTTCACGTACCGATATTTATGTCCTGCTATTTGTCTGTTTATTTTACAACTCATTCTTCACATTCTCTGATTGAAACCAAATGATCATTACAATTTGCAGCAAGTCTAAATTAGTTCTTTTGCAGAATACCGAGAACCATCGGTGTAGCCATTCCAATGAGGGCGACTTTTTTCATAACATATGTAATGGTTGACGGTTGGACTGGTGTAGCTGGTGAAATATTGAGATTGAGGGCACTTATAATCTTCCATTTGAAAAACTTTTTCTTGGTGAAGACTGAAAAGGACAGAGAAGAGGCAATGGATCCTGGTAGTATCTGTTTTGATTGGTGTGAACCACGTATACAGCTATATTTCTTACTTGGCCTTGTCTATGCTGTGGTGACACCGTTATTGCTTCCTTTCATATTGGTATTCTTCGGGCTGGCATATGTTGTCTACCGCCACCAGGTAAGGACCACTGCAGCTACTTGCGAGAATTTTATTGTGTTAAGTTTTAAGTGATTATGATGAACTACTAAATTAGCTTGCTTTGTATGACTATTTAGACCATTTTTCCCTGGTTTATTGGAAATAAACTTCATTACTGATCGGCACAAACAGTTTCCACTCATGATCAGTGTTGCTATGCTGTTGTGCATGTGTTAAGGGTATGTAATAATGGCTAAGATTTACTAAGAATATGTGCTTGGATATATTGTTTTGAGTTCGCCAACACAAGGGAGTATGCTATTGTGATAGATGGACAGTTATGCTAGCTAAAAGTTACATGCAATAAATCTATCAGAATGGTCATGCAACTAAGGGGCTGTTCAGCTGCCTGGGATGTGCAAGAACAGTTCCCCAAGCACGAAAATAGCAGCGGGCAGCAGCTTGGCCTGCCGAACAGCCCGCTAAGATACTTCCATTATCATCAACTGCAAAGCAATTTATATGAAACTGCAGTGATGCAATTAATCTACATATGATTCCTAATTTTGCGATATTAATTTTATGATTTAGTTGTGTATATAGTGTTTTGGTATGCTTACTTGGTTGCACATTTCTTTGAAGATAATAAATGTCTACAATCAACAATACGAGAGTGGTGCACAGTTTTGGCCGAGTGTGCACGGGCGCATAATCATTGCATTGATCGTATCACAGCTACTTCTTATTGGACTGTTGAGTACAAAAGGTTTCGAGGAGACGACACCAGTTCTTGTTGTTCTTCCTGTGTTGACGTTTTGGTTTTACAAGTACTGCAAGAACCGGTTTGAGCCTGCATTTGTGAGGAACCCACTACAGGTAATGTGTGACAGGAAGTTTTGTATACTGAAATGTTTGTTTTGGTTTGGTGGTAAGAGTGAAATTTGTTGGATGTGCAGGAAGCGATGAGGAAAGACACCCTGGAACGGGCAAGGGAGCCAACCTTCGATCTGAAAGCGTACCTGGCCAATGCGTACCTGCACCCGGTGTTCAAAGGCAGGGAGGAGGAGGACAATATGTCAATATCCGAGGATGTCGGGATGGAGGAGGTGATCGTGCCGACCAAGCGTCAATCTCGCCGGAACACTCCCGCCCAGAGCAAGTACGAAGGCTCCGACACGCTCTCTCTTCCTGAAACTGTACACGAACGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020484

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020484&oldid=49240"