BGIOSGA023660

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Revision as of 05:58, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023660| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023660, complete gene.| tag = P0627E1...")
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Gene Name

BGIOSGA023660

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023660, complete gene.

LocusTag

P0627E10.23

Ensembl Transcript ID

BGIOSGA023660-TA

Ensembl Protein ID

BGIOSGA023660-PA

Length

3634

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27761370..27765003

Sequence Coding Region

27764910..27765003,27761370..27764794

Genome Context

<gbrowseImage1> name=IndicaChromosome07:27761370..27765003 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:27761370..27765003 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGCAGCGGGCGGCAAGCAATGCCTACTCGTGGTGGTGGGCGAGCCACATCCGCACCACGCAGTCCAAATGGCTCGACGCCAATCTCCAAGAGATGGAAACCAGAGTCAAGATCATGCTCAAGCTCCTGGGAGAGGAAGCCGATACGTTCGGCAAGAGAGCCGAGATGTACTACCGCAGGAGACCAGAGGTGATTAACCATGTGGAAGAGGTTTACAGGGCCTACAGAGCTCTCGTTGAACGCTACGACCACTTATCCAAGGAGCTGCATAAGGCCAACCACACCATTGCTACTGCATGCCCACAACACGACGTCTCCTTGTTACAAGAACAAGACGATGCTGAATTCACACCCATCAGAATACAGGAATCCACTACTACTGTACAGGAGGTTTTGAACCCAAAAGGACATGCGCGCCCCTGTGCTCCTCACTTCACCAAACAGAATGCGCAACAAGAGATCGACACACTTCAAAAGGCTATACTTGTCCTGCAAACCGAGAAAGAATTCGTTAAGAGCTCTTACGAGACTGGGATTACCAAGTATCGGGAGATCGAGAAGCAGATTGCAGATATGCAGGACCAGGTATGCCACATCCAAAATGAGTTTGATGCACATGCGTCCATCGAGGATGATGAAGCCCGTGCCCTGATGACCATTACAGCTCTTAGATCTTGTCAAGGCACAGTAGCTAATCTTGTGAAAATATTTGAAGAGTTAGTCAGGGTTGCAGCAGGGGAGTCCGAAAAAGTAAATTATCTCCGACAAAAACTGTATGCTATGAACTACATCATTGACCCGTCTAAGGGAGAAGTTGGCACAACAAACATCGCAGTGAAAAATAGAGTTTATCCTAATACTCAGGAAATACTGGAGCTGCAGCCTATATATGAAAAAATCGAAAGGTTTTTTGAGCTCAACTCTGAATCTGTTGTGCAGGAGATGGCAGAGAGAGTTGATGAGCTTGTTGATAAGGTCATGAACTTGGAGCTCAAATTCCCAAAGCAGTCCGCTCAAATCAAGCAGCTGAAGGAAGATAATGATAGCCTCAAAGATAGGTTGGATGATCTACAAGATGAGATAGCACTTCGAGATGATCCAAGTGACTTAAGTGAACAGCTCAAGTTAACAGAAGATGAGTTGAACAGAGTCAAGGCTCTTGAAAGATCTGTTATTGAGGAAGAAGTTCTTGTTAGCACAGTCTTTTCTGAAGTTGTTAGTTGCATCACTAATATCTCAAAGGCCTTTGGATCTATTGATCCAGAGGACATGACTAGTTTATCAGCTGCAGTTGAAAATGATGGGGAAATAACATCAGATGATATCAGCACCTCACTGCCAGAAGAAGAATTCAGGGGTACAGAGGAAGCAACTACAGATGATAATTTGGGCAGAGACAGGTGTAGAAAAGAAGATGCCTCAGGAGTTGAGGGTCATGATTCACTAGATGGTACTGATGGCATTGATGACTGTAAGAATGGCAACGGGGAAAACTTTCAAAGTGAAAATCGCTTAATCCAAGAAGACTTGATGGATAAAAGGTCAATACAAGCTAGCAATAACATTGATCGAATTGTTATTCCAGGCAAAGAAAATGGTTTTAACAACGCATGTGAAGGCAAAATAGATTGCAGCCCATCAGGTAATACGAAGAAATATAGAGACATAGGAAATGATGTTATTGACAACTCTGCTCAAGGGGAAAGTTTGAAAGGTGAACATCCACCAACGGTAATAAGTCAGACTCACCTCCCACACTCAGAATGTTTAGATACTTTAACCAATAAAAGTGACTCCGATGAGAAAGGGTCATCAGTGGTTGTTACTGTGAATTCATTCGGAGGCAGCAAGAGAATACAAGGCTTAAGGATTGGTGGCAATGAAAATTCTATGTCTGGGAACAGCTTGATCCAGGAAGAACTCAGAGATGACAAATCACTAAAAACACCTGGATATGTTAATTTGGTTGGTTCTACAAACCAACATAGTTTGAGTGATGGAAGCACCACTGAAGAAATCTCATTACCCAAAGTTTCTAATAGTTGTTTCAGTGATGCAGATATGAGACCGGAATTATGTCATACTGAAGAAGCAATATCTGTTGAAGAATGGCCAAAACAAGATGGTCAGCTGATTGCCCCAGAAACTATGAAAAGTTTGAACGGAGGCAGCAAAGTTGACTCATCTGAGAAAGGTGGCCGCACTTCATTAGAGCATATGAACAGCATACAGGATTTGAAGACTAGTGAACTTGTGGATGCACATTCGTCAAGAGTGTATCAGCAAGTACCCAAAGTAACAACAAAATCAAACAATATTGCTAGTTGCATTCCTCATGGTGAGCTAGAGACGAGAAGTTCGGATGGCAGAGAACATACAAGACAAGCAAGTACCTTGAGCAAGCCTGGAAGCATGAGCTTGCGCGTCAATTCTAGTTTGGTTGCAGAAAGAGATGCACCTAGCTGGCAGGAGTTTCTCCTTGATGGCATTGAAGGTAGAGAAGCATTATTGCTAGACGACTACACTTTAATTCTCCGGAACTATAAAGAAACAAAGAGAAGGCTTGCTGAATTGGAAAAGAAAAATGAGCAACATCCCGAAGAGACAAAGACAGTAATAAGGGAGTTGAGGAATGCAAATTCCATGAAATATGTTGAGATCCAGTCCCTAAGAGATCTCCTGGATCCTTCAGAAGATATATCATCCACACATAGTAAAATGGGTTTTAACAGATCAAATCATCCTTTGGACACAGAAATTTCTGTGCTGGAGGGAATCGATGTAAGACACACTGGTGTACGGAAGAATACTTCACCTTTCGAAGTGAAGTTCAGATCTGAGATTGATGCTCTGGTTGAGGAAAACTTGCAGTTCTTGGTAAGGTTTAGCATGGCTTGCCACCGCATGCAGGACTTTGACAGCAAATATCAGGAGCTACAAAAGGGAATGGGGGATTTTGAAGTTAAGAAGACAGGAGAACCTGATGCTGCAGCCGAGTCTGATCCTGCTGAAAAGAAGTTGAGAGAGCTAAGAACTGAACTGGATGTATGGTTTGAACAGAATGCACTTCTTGATCAAGACCTGCAGCTCAAAACCATGTCTCTTTCCAGATTGCAGGAGGAGATAGCTGAAGCCTTGCGTGCTAGCGCAGAGACTGATGGTGGTAGGTTTACACCATACGAAGCAGCCAAGTTTCAAGGGGAGGTACTGAACATGCAACAGTCTAGTGGTAAGATCGAGAGGGAGTTACAGTCAGCACTGAAGCGCATGAGAGAACTTGAAGGCAAGGTCAATGACGGCTTGCAGAAGCTGCGTGAGAGCTTTGATCTTTCATGCAGGAGGTCATCTTTGGTGGAGGAAGAAAGCAGCAGCACCAGCTACCACAGCCAATTCAAACACTTCCCGACTAGAACAAGAGTGCCATTGCGGAACTTCCTATTCGGCACAAAGCCGAAGAAGAAATCAATATTTGCCTGCATAAATCCTACGTTGCAGAAACAGTTCAGCGATCTGTGA</cdnaseq>

Protein Sequence

<aaseq>MLQRAASNAYSWWWASHIRTTQSKWLDANLQEMETRVKIMLKLLGEEADTFGKRAEMYYRRRPEVINHVEEVYRAYRALVERYDHLSKELHKANHTIATACPQHDVSLLQEQDDAEFTPIRIQESTTTVQEVLNPKGHARPCAPHFTKQNAQQEIDTLQKAILVLQTEKEFVKSSYETGITKYREIEKQIADMQDQVCHIQNEFDAHASIEDDEARALMTITALRSCQGTVANLVKIFEELVRVAAGESEKVNYLRQKLYAMNYIIDPSKGEVGTTNIAVKNRVYPNTQEILELQPIYEKIERFFELNSESVVQEMAERVDELVDKVMNLELKFPKQSAQIKQLKEDNDSLKDRLDDLQDEIALRDDPSDLSEQLKLTEDELNRVKALERSVIEEEVLVSTVFSEVVSCITNISKAFGSIDPEDMTSLSAAVENDGEITSDDISTSLPEEEFRGTEEATTDDNLGRDRCRKEDASGVEGHDSLDGTDGIDDCKNGNGENFQSENRLIQEDLMDKRSIQASNNIDRIVIPGKENGFNNACEGKIDCSPSGNTKKYRDIGNDVIDNSAQGESLKGEHPPTVISQTHLPHSECLDTLTNKSDSDEKGSSVVVTVNSFGGSKRIQGLRIGGNENSMSGNSLIQEELRDDKSLKTPGYVNLVGSTNQHSLSDGSTTEEISLPKVSNSCFSDADMRPELCHTEEAISVEEWPKQDGQLIAPETMKSLNGGSKVDSSEKGGRTSLEHMNSIQDLKTSELVDAHSSRVYQQVPKVTTKSNNIASCIPHGELETRSSDGREHTRQASTLSKPGSMSLRVNSSLVAERDAPSWQEFLLDGIEGREALLLDDYTLILRNYKETKRRLAELEKKNEQHPEETKTVIRELRNANSMKYVEIQSLRDLLDPSEDISSTHSKMGFNRSNHPLDTEISVLEGIDVRHTGVRKNTSPFEVKFRSEIDALVEENLQFLVRFSMACHRMQDFDSKYQELQKGMGDFEVKKTGEPDAAAESDPAEKKLRELRTELDVWFEQNALLDQDLQLKTMSLSRLQEEIAEALRASAETDGGRFTPYEAAKFQGEVLNMQQSSGKIERELQSALKRMRELEGKVNDGLQKLRESFDLSCRRSSLVEEESSSTSYHSQFKHFPTRTRVPLRNFLFGTKPKKKSIFACINPTLQKQFSDL</aaseq>

Gene Sequence

<dnaseqindica>1..94#210..3634#ATGCTGCAGCGGGCGGCAAGCAATGCCTACTCGTGGTGGTGGGCGAGCCACATCCGCACCACGCAGTCCAAATGGCTCGACGCCAATCTCCAAGGTTTGTTTCCGCTTCGATCCCCCTTTCTTAGTCTTACTACTTGTTAGGGATGTGATGTGATCCCCCTTTGTAGTCACTACACTAGATGAGAGTACTATTATTTTGGCGCACGCAGAGATGGAAACCAGAGTCAAGATCATGCTCAAGCTCCTGGGAGAGGAAGCCGATACGTTCGGCAAGAGAGCCGAGATGTACTACCGCAGGAGACCAGAGGTGATTAACCATGTGGAAGAGGTTTACAGGGCCTACAGAGCTCTCGTTGAACGCTACGACCACTTATCCAAGGAGCTGCATAAGGCCAACCACACCATTGCTACTGCATGCCCACAACACGACGTCTCCTTGTTACAAGAACAAGACGATGCTGAATTCACACCCATCAGAATACAGGAATCCACTACTACTGTACAGGAGGTTTTGAACCCAAAAGGACATGCGCGCCCCTGTGCTCCTCACTTCACCAAACAGAATGCGCAACAAGAGATCGACACACTTCAAAAGGCTATACTTGTCCTGCAAACCGAGAAAGAATTCGTTAAGAGCTCTTACGAGACTGGGATTACCAAGTATCGGGAGATCGAGAAGCAGATTGCAGATATGCAGGACCAGGTATGCCACATCCAAAATGAGTTTGATGCACATGCGTCCATCGAGGATGATGAAGCCCGTGCCCTGATGACCATTACAGCTCTTAGATCTTGTCAAGGCACAGTAGCTAATCTTGTGAAAATATTTGAAGAGTTAGTCAGGGTTGCAGCAGGGGAGTCCGAAAAAGTAAATTATCTCCGACAAAAACTGTATGCTATGAACTACATCATTGACCCGTCTAAGGGAGAAGTTGGCACAACAAACATCGCAGTGAAAAATAGAGTTTATCCTAATACTCAGGAAATACTGGAGCTGCAGCCTATATATGAAAAAATCGAAAGGTTTTTTGAGCTCAACTCTGAATCTGTTGTGCAGGAGATGGCAGAGAGAGTTGATGAGCTTGTTGATAAGGTCATGAACTTGGAGCTCAAATTCCCAAAGCAGTCCGCTCAAATCAAGCAGCTGAAGGAAGATAATGATAGCCTCAAAGATAGGTTGGATGATCTACAAGATGAGATAGCACTTCGAGATGATCCAAGTGACTTAAGTGAACAGCTCAAGTTAACAGAAGATGAGTTGAACAGAGTCAAGGCTCTTGAAAGATCTGTTATTGAGGAAGAAGTTCTTGTTAGCACAGTCTTTTCTGAAGTTGTTAGTTGCATCACTAATATCTCAAAGGCCTTTGGATCTATTGATCCAGAGGACATGACTAGTTTATCAGCTGCAGTTGAAAATGATGGGGAAATAACATCAGATGATATCAGCACCTCACTGCCAGAAGAAGAATTCAGGGGTACAGAGGAAGCAACTACAGATGATAATTTGGGCAGAGACAGGTGTAGAAAAGAAGATGCCTCAGGAGTTGAGGGTCATGATTCACTAGATGGTACTGATGGCATTGATGACTGTAAGAATGGCAACGGGGAAAACTTTCAAAGTGAAAATCGCTTAATCCAAGAAGACTTGATGGATAAAAGGTCAATACAAGCTAGCAATAACATTGATCGAATTGTTATTCCAGGCAAAGAAAATGGTTTTAACAACGCATGTGAAGGCAAAATAGATTGCAGCCCATCAGGTAATACGAAGAAATATAGAGACATAGGAAATGATGTTATTGACAACTCTGCTCAAGGGGAAAGTTTGAAAGGTGAACATCCACCAACGGTAATAAGTCAGACTCACCTCCCACACTCAGAATGTTTAGATACTTTAACCAATAAAAGTGACTCCGATGAGAAAGGGTCATCAGTGGTTGTTACTGTGAATTCATTCGGAGGCAGCAAGAGAATACAAGGCTTAAGGATTGGTGGCAATGAAAATTCTATGTCTGGGAACAGCTTGATCCAGGAAGAACTCAGAGATGACAAATCACTAAAAACACCTGGATATGTTAATTTGGTTGGTTCTACAAACCAACATAGTTTGAGTGATGGAAGCACCACTGAAGAAATCTCATTACCCAAAGTTTCTAATAGTTGTTTCAGTGATGCAGATATGAGACCGGAATTATGTCATACTGAAGAAGCAATATCTGTTGAAGAATGGCCAAAACAAGATGGTCAGCTGATTGCCCCAGAAACTATGAAAAGTTTGAACGGAGGCAGCAAAGTTGACTCATCTGAGAAAGGTGGCCGCACTTCATTAGAGCATATGAACAGCATACAGGATTTGAAGACTAGTGAACTTGTGGATGCACATTCGTCAAGAGTGTATCAGCAAGTACCCAAAGTAACAACAAAATCAAACAATATTGCTAGTTGCATTCCTCATGGTGAGCTAGAGACGAGAAGTTCGGATGGCAGAGAACATACAAGACAAGCAAGTACCTTGAGCAAGCCTGGAAGCATGAGCTTGCGCGTCAATTCTAGTTTGGTTGCAGAAAGAGATGCACCTAGCTGGCAGGAGTTTCTCCTTGATGGCATTGAAGGTAGAGAAGCATTATTGCTAGACGACTACACTTTAATTCTCCGGAACTATAAAGAAACAAAGAGAAGGCTTGCTGAATTGGAAAAGAAAAATGAGCAACATCCCGAAGAGACAAAGACAGTAATAAGGGAGTTGAGGAATGCAAATTCCATGAAATATGTTGAGATCCAGTCCCTAAGAGATCTCCTGGATCCTTCAGAAGATATATCATCCACACATAGTAAAATGGGTTTTAACAGATCAAATCATCCTTTGGACACAGAAATTTCTGTGCTGGAGGGAATCGATGTAAGACACACTGGTGTACGGAAGAATACTTCACCTTTCGAAGTGAAGTTCAGATCTGAGATTGATGCTCTGGTTGAGGAAAACTTGCAGTTCTTGGTAAGGTTTAGCATGGCTTGCCACCGCATGCAGGACTTTGACAGCAAATATCAGGAGCTACAAAAGGGAATGGGGGATTTTGAAGTTAAGAAGACAGGAGAACCTGATGCTGCAGCCGAGTCTGATCCTGCTGAAAAGAAGTTGAGAGAGCTAAGAACTGAACTGGATGTATGGTTTGAACAGAATGCACTTCTTGATCAAGACCTGCAGCTCAAAACCATGTCTCTTTCCAGATTGCAGGAGGAGATAGCTGAAGCCTTGCGTGCTAGCGCAGAGACTGATGGTGGTAGGTTTACACCATACGAAGCAGCCAAGTTTCAAGGGGAGGTACTGAACATGCAACAGTCTAGTGGTAAGATCGAGAGGGAGTTACAGTCAGCACTGAAGCGCATGAGAGAACTTGAAGGCAAGGTCAATGACGGCTTGCAGAAGCTGCGTGAGAGCTTTGATCTTTCATGCAGGAGGTCATCTTTGGTGGAGGAAGAAAGCAGCAGCACCAGCTACCACAGCCAATTCAAACACTTCCCGACTAGAACAAGAGTGCCATTGCGGAACTTCCTATTCGGCACAAAGCCGAAGAAGAAATCAATATTTGCCTGCATAAATCCTACGTTGCAGAAACAGTTCAGCGATCTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023660