BGIOSGA023665

From RiceWiki
Revision as of 05:58, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023665| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023665, complete gene.| tag = P0627E1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023665

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023665, complete gene.

LocusTag

P0627E10.8

Ensembl Transcript ID

BGIOSGA023665-TA

Ensembl Protein ID

BGIOSGA023665-PA

Length

6235

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27678703..27684937

Sequence Coding Region

27683958..27684937,27680198..27680465,27679160..27679219,27678703..27679056

Genome Context

<gbrowseImage1> name=IndicaChromosome07:27678703..27684937 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:27678703..27684937 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGCGCAGCTTGGTGATTGTGATGGTGGCCTGCAGCTGCGCCACAGCCATAGCCAGAGGAGGAGGAGGAGGAGGAGGAGGTCTGAAGCTCAACTTCTACTCGGAGTCGGAGAGGTGCCCGAGGGCGGAGGAGGTGGTGAGGGAGGAGGTGCGGAGGCTGTACGAGGAGCACGGCAACACGGCGGTGTCGTGGTTGAGGGCACTCTTCCACGACTGCATGGTCTACTCCTGCGACGCCTCCCTGCTGCTCCACACCACCACCACCACAGGCGTCTCCGAGCAGTCCTCCCACCGCAGCTTCGGCATGCGCAACTTCAAGTACATCACCGCCATCAAGGCCGCCGTCGAGCGTGAGTGCCCTGCCACCGTCTCCTGCGCCGACATCCTCGCCCTGGCCGCCCGCGACGGCGTGGCCATGCTGGGTGGGCCCTCGGTGGCCATGCGGACGGGGCGGCGCGACAGCAGGGAGAGCTACTACGGCGTGGTGGAGCAGTACATCCCCAACCACAACGACAGCGTGTCCACCGTGCTGTCGAGGTTCGCGGCCATCGGGGTGGACACGGAGGGAGCGGTGGCGCTGCTGGGCGCGCACTCGGTGGGGCGCGTCCACTGCTTCAACCTGGTGGGGAGGCTGTACCCGCAGGTGGACGGCAGCATGGAGGCGGCGTACGGGGAGTACCTGCGGGGGAGGTGCCCGACGGCTGCGGCGACGGAGGACACGAGAGAGGTGGTGTACGCGCGCAACGACCGCGTCACGCCCATGCTCATCGACAACATGTACTACCGCAACCTGCTCGCCGGGCGGGGGCTCCTCCTGGTGGACCAGCAGCTGGCCTCCGACGCCCGCACGGCGCCCTACGTCCGCCGGATGGCCGCCGACAACGACTACTTCCACCAGCGCTTCGCCGCAGCGCTTCTCACCATGTCCGAGAACGCGCCGCTCACCGGCGCACAGGGGGAGGTCAGAAAAGACTGCAGCGCCTCCCTCCCACCCGCATCTTCTTCCACCTCCTCCCATCCATCCGAGCTCCTTCCCTTCCACCTCCCATCCGTCGACGCCAACGCCGGCGGTGCGGCGGCCAACCTGGCCCATGCGCTGCCGCCACCGGTGCCCAACCTGGCCCGTGCGGTGGGGGCACCGCCGGGGAAGCGAATCGAGGTGGTGTGGGAGCGGGAGAACACGCTGCTCTCGTTCGGCCGGGCCGCCGCGCACACCGCCGTCGCCTTCGTCGAGTTCAACGTCCAGCCATCCAGTGACAAGCAAATCAGGAGGGCCGCGCCAGCTCAGAGTGCATCCTCGCTTGGGAGTACAATGTTGCACGATTGGCTTCGGGCTATTTCAGAGTATGAGAAGCCAAGCATCGACATGGCAACCATCGAGAAGGCATGGGCCGATGAGAAAAAGGCAATCGCTGATGCGGACTATGAGGGAAATCCAAGCAAGGTGAACACAAGCTCCGAGAAGAAGGCATGTGTCGACGAGGGGAAGTCAATCTCCGATGCAGAAACTGATGATGAGGGCGTCGGTGTGCCTGAGAAGAAGGCATGCATCGCCGAGGGAAAGTCAATCTCCGACGCAGAGACTGATGATGAGGGCGTCGGTGTGCCTCAGAATTTACAGATGAAAGATTTGCACGATATCATGTTTCCTACCTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MRRSLVIVMVACSCATAIARGGGGGGGGLKLNFYSESERCPRAEEVVREEVRRLYEEHGNTAVSWLRALFHDCMVYSCDASLLLHTTTTTGVSEQSSHRSFGMRNFKYITAIKAAVERECPATVSCADILALAARDGVAMLGGPSVAMRTGRRDSRESYYGVVEQYIPNHNDSVSTVLSRFAAIGVDTEGAVALLGAHSVGRVHCFNLVGRLYPQVDGSMEAAYGEYLRGRCPTAAATEDTREVVYARNDRVTPMLIDNMYYRNLLAGRGLLLVDQQLASDARTAPYVRRMAADNDYFHQRFAAALLTMSENAPLTGAQGEVRKDCSASLPPASSSTSSHPSELLPFHLPSVDANAGGAAANLAHALPPPVPNLARAVGAPPGKRIEVVWERENTLLSFGRAAAHTAVAFVEFNVQPSSDKQIRRAAPAQSASSLGSTMLHDWLRAISEYEKPSIDMATIEKAWADEKKAIADADYEGNPSKVNTSSEKKACVDEGKSISDAETDDEGVGVPEKKACIAEGKSISDAETDDEGVGVPQNLQMKDLHDIMFPTC</aaseq>

Gene Sequence

<dnaseqindica>1..980#4473..4740#5719..5778#5882..6235#ATGAGGCGCAGCTTGGTGATTGTGATGGTGGCCTGCAGCTGCGCCACAGCCATAGCCAGAGGAGGAGGAGGAGGAGGAGGAGGTCTGAAGCTCAACTTCTACTCGGAGTCGGAGAGGTGCCCGAGGGCGGAGGAGGTGGTGAGGGAGGAGGTGCGGAGGCTGTACGAGGAGCACGGCAACACGGCGGTGTCGTGGTTGAGGGCACTCTTCCACGACTGCATGGTCTACTCCTGCGACGCCTCCCTGCTGCTCCACACCACCACCACCACAGGCGTCTCCGAGCAGTCCTCCCACCGCAGCTTCGGCATGCGCAACTTCAAGTACATCACCGCCATCAAGGCCGCCGTCGAGCGTGAGTGCCCTGCCACCGTCTCCTGCGCCGACATCCTCGCCCTGGCCGCCCGCGACGGCGTGGCCATGCTGGGTGGGCCCTCGGTGGCCATGCGGACGGGGCGGCGCGACAGCAGGGAGAGCTACTACGGCGTGGTGGAGCAGTACATCCCCAACCACAACGACAGCGTGTCCACCGTGCTGTCGAGGTTCGCGGCCATCGGGGTGGACACGGAGGGAGCGGTGGCGCTGCTGGGCGCGCACTCGGTGGGGCGCGTCCACTGCTTCAACCTGGTGGGGAGGCTGTACCCGCAGGTGGACGGCAGCATGGAGGCGGCGTACGGGGAGTACCTGCGGGGGAGGTGCCCGACGGCTGCGGCGACGGAGGACACGAGAGAGGTGGTGTACGCGCGCAACGACCGCGTCACGCCCATGCTCATCGACAACATGTACTACCGCAACCTGCTCGCCGGGCGGGGGCTCCTCCTGGTGGACCAGCAGCTGGCCTCCGACGCCCGCACGGCGCCCTACGTCCGCCGGATGGCCGCCGACAACGACTACTTCCACCAGCGCTTCGCCGCAGCGCTTCTCACCATGTCCGAGAACGCGCCGCTCACCGGCGCACAGGGGGAGGTCAGAAAAGACTGCAGGTTCGTCAACTCTAGCTAAGCTCGACTAGCTAGTAGTACACATATACATACATATATGATCGATGTAAAAATAATTGAGGTACGTTCTATGAGATCGATCGGTCTGTAAACTAATCGATCGGCGGCCTCTATCTGTTGGCATCGACTCCTCCATTGGATCTTTGTATTTTTCTCAACTTGTATGTACGTACGTATGTATGTGGGGTTCCGTCGAGTCGTGTGTGTCCGTGACCGTAACTGGACTCAATTATTATGGAGTAACATAATATATATTGTATGCGTGGCGTTCCATCGTTACAAATATGCAACAGTGTCTATCATCATAGCAGTAGTGCAGTGGCGGCAGCGACATGTTTCGATGGATCAGATTCAAAATACTTTGGGGGAATAAGTTCACCGGAGGTCCCTTAACCACAAAACCAGAAATGTCTACCCCTAAACTCACTCGAACCGTTCACCGGAGGTCCCTCGGCAGTATTTTTGCCCGGTTTTGCTGACGTGGCATCCTAGTCAGCAAAAAAAAAATTAAAAAAAATACATGGGGCTCACATGTCAGCTGCACATTTTTTTCTTCTCTTTTCTTCTCCTTCTCTCCTCTTCTCATTTAGGCTGCAGGCGGAGGCGGAGCAGCCACGCACCGTGGCCGCCGTCGTCGTCGGCTCTCCACTGTCGTCGTCGCCATGAGCGAGGCTACGCGGAGCGGCCGTCCGGCGGCGGAGCGGAGGCAGCGGAGCACGGCGGCGGGCGGAGCAGCCGCGCGCCGTGGCCGCCCTCGTTGTCGGCTCTCCATCGTCGTCGTCGCCGTGGGCGAGGCCTAGAGTTACATGCACATATGCATTCATTCATGAATGTAGTACATATATATTCGATGGATCGATCTTGTCACTTTCAACCCGTGCAGCCTGCAAATCAATCACAAGCTGCTTTTGCTTTGGTCTTTTTCTCTCTATTGCATGCATGTATCCCTCACTTGAGAACCCATAGCTAGCATGCATGCGTTCACGGGCTTTTGGCCTTTCTTCTCTCGCGCGTGGAGGGACGCCATTGCCGCCGACAAGCTCACGAGTGAAGCTCGGCCGGCTCTCTCTCCTCTCCGGCAAGAAGGGCGCCAAGGCCGCCCTGTCCGACGACGACGATTACGAGCCCCCCGCGCCGCCGCTCCCACCCGGGGACGGCGACAATGACGAGGAGCCCATCAACCTCGTCTTCAAGCGCGGAGATGAGGCCGGCGGGAGAGGGGGTGGCGCGCCGCATCGGCGAAGAGGTCGTTGCCGACATCCTACCGCCGCTCCGCAGCCACACTTGCCCCCCGCCGCTCGCCGACCAGGCCCCCCGCTCCGTCGTAATCGCCCGCCGCCCTCTGCCCACCGCTGCTCCGCCTACCACGCTCGTGGAGGTCAGCCAACACGACGACGACACCGGCGGTGAAGAGCTGGAGCATGACGAGCGCCGCTGCTCCGCTGCCACTCTCGCCCGCTGCCCTGCCCGCCGCTCCCGCCGTCCCAGCTGCCTCTCTCCCCCTCTCCCGCCACCGCTGGCGCGCTCGCTCCACGCCGCCCACCGCCGTGCCCGCTTCCTCTCCCCTCTCTCGCTTCTTCCCCGCGCGCCGCTGTGCCCGCACCGCCGCCTATCGCCACGCCCTCATTTGCCCGGCCGCCTCACTGAAGAAGACGAGAAAAGAAAATGTGCAGCTGACATGTGGGCCCCATGTACTTTTTAATTTTTTTTGCTGACTAGGATGCCACGTCAGTAAAACCGGGTAAAAATACTGCCGAGGGACCTCCGGTGAACGGTTTGAGGGAGTTTAGGGGTACACATTTTTGATTTTGTGGTTAAGGGACCACAGAAAATCTCGCTGTTAAGTTGAGAGACCCCTGGTGAACTTATTCCTAGTTTAGGATAGAGCGTTGACTGACGTTGGTTGCGATTGGGCCTCTTTCTCATCTTTCGACGAGTTTAATTGGGCCCCATCACAACGTACGGCATATTTTATCCCCAACGTCTCCACTCTCACACCTCCCTCTCTCCTGAGTCCCCTCTTTCAAGATATTTAACTATTTATCAATTTTACATATAGCAATTTCACTAAACTTACATATCATAGATACATACATGATGGTCCACATATCGTAGTTTGTGAGTAACAAATCATTAATTACCACATCTTAAAAGTAACGAATAGTTAAATGCCCCTACGAGTCCCACATAAGCAACCTCATCGACGACGTCATGCACCCAAGCCGGTCGGCATCGGCAGCCTCGCCTCCACTCAGAGTAGGTGTACAATAGCAGACTATAAGCTAACTATAAATACATTTCGAGGAGATACCAAAACATGGCAGGGAAAGATTTGTAGTGGCAGATCTATCTCTTCTTCAAAAAAGATTATCGATCTTGGAGTATATGTATAGTTAGCTTTTGTATGAGAGCTAACACTCATTTTTTCTTTATCTTTCTCTTCCACATAAGATTATAGTTGGCTTATAACCCACTGCCATCCTTGCTACATACTCTCTCCGTGCTCGTAAAGGAAGTCGTTTTGGACAGCGACACGGTCTCCAAAACACAACTTTGACTTCTTGTTTTCCAAAAGTGATATATGTATACTTTTATGAAAATATTTTTCAAGACAAATCTATTCATATAACTTTTACATTTTCAAACTCAACAACATTAGAGTTATTCATGATTTATAATCTCAAAGTTTGATTTAAATATTGTTCTAAACGACTTCTTTACGAGTACAGAGGGAGTATATCAACATCCAACATCACAGGAAGCCTTCCGGTAAGACTCGCATTAATGCATTATACTTGTTGGCTGCTGCTTTGAATGTGGTGTGTTGTTTTGAGGTGCAATCATTCGAACAATCAAACATGAAGGCTCTAGCAAATGAAACCTGAAGATGTAGATATTCTGGGTAAAGGGTTTGTCTTTCCCTTTTTTATTAGTCTGACAGATCAATTACAACCTCCGCATTCATCTTAGGTATTAGGACCTATTTCGGGAAACTTTTAGTAGCTGTATCTTTCAACAGAATCTCTAACTCTCCCAAACAGTTTAGATTATCACCTAGATTCTACAAATATGTATATGTAGAATCCATAAAATAAATTAGAAGCTAGAAGCTGAAAAACCCAGCTTCTTCAAATTCTTAGAAACTGGCTACTAACTAGCAAATTATGAGAATCTTAAGCTCCTCATTTCATCTATGATTGGCTTGCTTTTACCATGCGAAAAGAGGTAACAATTACGTAGTACTCCCTCCGTCCCATATTATATGGGATTAGGGGTTAAAAACGTGTCTCAAAATATAAGGGATCGGGTAGGTAGAATACTAATGCAAACAGACATCGGGCAGGGAGAGTACTAATGCAGACAGAGAGCTGTCGGTGGAATTTGTCCCTACCTTATCCTCTCACCGAGTCGCCCATCGACCACCGCTCGTTCCCCTCCCGATTTTCTTCGCTTTTTCTCCGTCCCCTCCATCAGCGCCTCCCTCCCACCCGCATCTTCTTCCACCTCCTCCCATCCATCCGAGCTCCTTCCCTTCCACCTCCCATCCGTCGACGCCAACGCCGGCGGTGCGGCGGCCAACCTGGCCCATGCGCTGCCGCCACCGGTGCCCAACCTGGCCCGTGCGGTGGGGGCACCGCCGGGGAAGCGAATCGAGGTGGTGTGGGAGCGGGAGAACACGCTGCTCTCGTTCGGCCGGGCCGCCGCGCACACCGCCGTCGCCTTCGTCGAGTTCAACGTCCAGGTATATATATACAGTGCAGCCGAGTTCGATGTGCGTGCTTCCATTTCCACGTTGTTGGTAGTACCTGTGTTTGTTTTGGATCTTACATTGGATGTCAGTTTACGCTTTGAATTGTTTGATTTTGACACCGCAGCATCGCAATGCAAGATTTGGAAGCTAGCGTGGGTATGACTTGGATGTAGCCATTGATTGGTGTGGTACTGGACATGAAATTTGCAGCAACGTTCTAGCCAGTGAACTATATGGGACAAGACTCACAAGTATGAGTATCAATTTAATCGCATTTAACTAGGATCTAGATGCCACCATGCTAAATTGGTCAAGAATGAAGAATGGAGCGATTTTAGGTGGATGTTTTGCAGGGATGTAGTTATCCATTAGGCAAAGTGCTAGGATTTGAAGTTGCAGTTCTTGTTTAGAGCTGAAGAGGTTCTTAATACATTGCCAACTACTCTTAGATCATACGGAGTACTAGGAAATTAACGGTGTTAAAAAAAACTGAAGTGTCAATTTTATTAATCTTAAACGCTGTTAGGCACATCATATCTTAGATTCATGGTAGATTTAAAGGTTCTATGTTTCATTTTGATAGTTTAAAATTTAAAATTTTATTTAAAATAGGAATATAATGATTTAACATGTCGCCGGCAGCAGTTTACGGGCTGGCGGCAAAATGCGGCCTAGCGGCAGGGTTCGCGGGACGTGGTGGTTGCTAGGCAAAGAGCCGCGTCCAGTGGCGGAAGGCGTTTGTTTTGACGACTTGGTGTTTGTCCCTGACTCGGATGATGAAGGGGCTGGCAATGAGTTCAACTCACAAGGTTGTGACGACGAATTTGTGCCTGAAACACAACAAGATGTTCCAATCGAGGAGATTGGCATAGGGTTCCTCTCTTATTTATTTAATTATTAGTCCTTTCCATTCAATTTTGTTAAATTATGTGCTTTTTGATGTTCCATTTATTTCTCCTTACGGTGCAGCCATCCAGTGACAAGCAAATCAGGAGGGCCGCGCCAGCTCAGAGTGCATCCTCGCTTGGGGTATGTGATTCACACTAGATTGTTGATTTGGGATGGTTATGCATTTGTAGCATGCAAATTGAGTCACATCTTGATTTATATTGATTTGTCTTATCTTCTTTAGAGTACAATGTTGCACGATTGGCTTCGGGCTATTTCAGAGTATGAGAAGCCAAGCATCGACATGGCAACCATCGAGAAGGCATGGGCCGATGAGAAAAAGGCAATCGCTGATGCGGACTATGAGGGAAATCCAAGCAAGGTGAACACAAGCTCCGAGAAGAAGGCATGTGTCGACGAGGGGAAGTCAATCTCCGATGCAGAAACTGATGATGAGGGCGTCGGTGTGCCTGAGAAGAAGGCATGCATCGCCGAGGGAAAGTCAATCTCCGACGCAGAGACTGATGATGAGGGCGTCGGTGTGCCTCAGAATTTACAGATGAAAGATTTGCACGATATCATGTTTCCTACCTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023665