BGIOSGA023681

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Revision as of 05:59, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023681| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023681, complete gene.| tag = OJ1165_...")
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Gene Name

BGIOSGA023681

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023681, complete gene.

LocusTag

OJ1165_F02.119

Ensembl Transcript ID

BGIOSGA023681-TA

Ensembl Protein ID

BGIOSGA023681-PA

Length

5569

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27386084..27391652

Sequence Coding Region

27391541..27391652,27391367..27391410,27391132..27391173,27390404..27390508,27390026..27390153
,27389711..27389833,27388939..27389092,27388485..27388588,27388318..27388396
,27387873..27387968,27387609..27387746,27386961..27387176,27386693..27386884
,27386329..27386472,27386084..27386242

Genome Context

<gbrowseImage1> name=IndicaChromosome07:27386084..27391652 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:27386084..27391652 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTTGTGGTGGCCGCTCCTGGTGCTCGCCGCCGCCTACGCGCTCTGCCGCATCCTCCTCTTCCTCATCCCGCCCACCGTCCCCTCCATCGATGTCGACGCTTCCGACGTGCTCGAAGACGCCAACCAGAACAAGGAGGATAGCTACATCTACATTTCCAATGACATAGGATCGCACATTGCGTCTAGCTTTCAGATACCACCAAGGAAGGGGAAAGGAGCTCAGACTGACAAGGTCCAATGCTATGAGCCAGCAACTATGAAATACTTGGGATACTTCCCTGCATTGACGCCTGATGAGGTTAAGGAGCATGTTGCGCAAGCCAGGAAAGCACAAAAGATATGGGCAAAAAGCAGCTTCAAGCAAAGACGCCAGTTTCTTCGAATCCTTCTAAAATATATACTTGAACATCAGGATCTGATATGCGAGATATCATCCCGGGACACTGGAAAGACTATGGTTGATGCTTCATTAGGTGAGATAATGACCACCTGTGAGAAGATTACCTGGCTTTTGGATGAGGGTGAGAAGTGGTTAAAACCTGAATACAGGTCCTGTGGGAGATCAATGCTTCACAAGAAAGCAAAAGTTGAGTTCTATCCACTTGGAGTTATTGGTGCAATTGTGTCTTGGAATTACCCCTTCCACAATGTATTCAATCCAATGCTGGCTGCAATATTCTCTGGTAATGCAGCAGTTATAAAGGTTTCAGAGCATGCAAGTTGGTCAGGCTGCTTTTATTTTCGTATCATACAAGCAGCTCTTGCAGCTGTTGGTGCACCAGATAATCTGGTGCATATAATAACTGGTTTTGCGGAAACAGGTCAAGCTCTTGTATCTTCAGTCGACAAAATAATATTTGTTGGATCACCTGGTGTTGGAAGGATGATCATGAACAGAGCATCGGATACATTAATACCTGTAACTCTTGAACTTGGTGGTAAAGATGCATTTATTGTATGTGAAGATGTAGACTTACCCAGTGTTGTTCAAGTTGCTGTGAGAGCTGCCCTGCAATCTAGCGGACAAAACTGTGCTGGTGCTGAAAGATTTTATGTTCACAAGGATATCTATTCAACATTTGTTTCCCAAGTGGTGAAGATAATCAAATCTATATCTGTCGGTCCTCCATTATCTGGCAGATACGATATGGGTGCTATCTGTATGATAGAGCACTCTGAGAAACTTCAGAATCTTGTTAATGATGCTGTTGACAAAGGTGCTGAGATTGCTGGCAGAGGGAGCTTTGGCCATCTGGGTGAAGATGCAGTAGATCAATTCTTTCCTCCAACTGTCCTGGTGAATGTTAATCACACAATGAAAATTATGCAAGAAGAGGCATTTGGACCTATTCTGCCAATCATGAAATTCAATTCCGATGAAGAAGTTGTCAAACTTGCCAATGACTCCAAGTACGGTCTTGGTTGTGCTGTCTTTTCTGGCAACCAGAAGCGTGCCATCAAAATAGCATCCCAGCTACACTGTGGTGTTGCAGCAATCAATGATTTTGCTTCAAGTTATATGTGTCAGTCTTTGCCATTCGGTGGTGTCAAAGATAGTGGATTTGGAAGATTTGCTGGTGTGGAAGGTTTGCGGGCTTGCTGCCTTGTCAAGGCAGTTGTAGAAGATAGATGGTGGCCATATGTTAAAACCATGATCCCAAAACCTATTCAGTATCCTGTCTCCGAGAATGGATTTGAATTCCAAGAGTTGCTCGTTGAAACTCTCTACGGCCTTAGTGTGTGGGACAGATTGCGGTCACTTGTCAATCTGTTAAAGATGATTTCAGAGCAGAATAATTCTCCTGCTAACACCAGGAAGAAAAGCCGATGA</cdnaseq>

Protein Sequence

<aaseq>MALWWPLLVLAAAYALCRILLFLIPPTVPSIDVDASDVLEDANQNKEDSYIYISNDIGSHIASSFQIPPRKGKGAQTDKVQCYEPATMKYLGYFPALTPDEVKEHVAQARKAQKIWAKSSFKQRRQFLRILLKYILEHQDLICEISSRDTGKTMVDASLGEIMTTCEKITWLLDEGEKWLKPEYRSCGRSMLHKKAKVEFYPLGVIGAIVSWNYPFHNVFNPMLAAIFSGNAAVIKVSEHASWSGCFYFRIIQAALAAVGAPDNLVHIITGFAETGQALVSSVDKIIFVGSPGVGRMIMNRASDTLIPVTLELGGKDAFIVCEDVDLPSVVQVAVRAALQSSGQNCAGAERFYVHKDIYSTFVSQVVKIIKSISVGPPLSGRYDMGAICMIEHSEKLQNLVNDAVDKGAEIAGRGSFGHLGEDAVDQFFPPTVLVNVNHTMKIMQEEAFGPILPIMKFNSDEEVVKLANDSKYGLGCAVFSGNQKRAIKIASQLHCGVAAINDFASSYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKAVVEDRWWPYVKTMIPKPIQYPVSENGFEFQELLVETLYGLSVWDRLRSLVNLLKMISEQNNSPANTRKKSR</aaseq>

Gene Sequence

<dnaseqindica>1..112#243..286#480..521#1145..1249#1500..1627#1820..1942#2561..2714#3065..3168#3257..3335#3685..3780#3907..4044#4477..4692#4769..4960#5181..5324#5411..5569#ATGGCGTTGTGGTGGCCGCTCCTGGTGCTCGCCGCCGCCTACGCGCTCTGCCGCATCCTCCTCTTCCTCATCCCGCCCACCGTCCCCTCCATCGATGTCGACGCTTCCGACGGTACTTAGGTTTTACTGTTTTTATTTTTTATTTCCCTCTGAGATTGCTCTGCTCATAGCTCATGGCTCATGGGGTTTATGTGGGATTTACTCTAATGGTATCGGATCGGATCGGGTTCTATTGTATGCAGTGCTCGAAGACGCCAACCAGAACAAGGAGGATAGCTACATCTACGTAAGTTTAACTACTTACTAATCCCCTTTCCCCTTTCCTTCCACTTCTATACTGCCCTGGGATGATTCACTACTTCATATGCATCTGCACTCTGCTTCTTTTGTCTATTCACCCTCGGTCTCCACTTACTTGGCTTTGATGCGCAAACCGGCCCATTCTGCTGCCATTGCTTGTTTCGGCTTCTTCCACATAGATTTCCAATGACATAGGATCGCACATTGCGTCTAGCTTTCAGGTATTGCGTTTCACTATTTCGGTTCAGTTCAGGTGCTCATAGGTCTGAAGAGTTGGTACTGTCTGGTGTACTATGGCTATCTTACTGTTAGTGGACAAATGTTTAAAGACTGTCTGCCTCGAATTTCCAGTTTTAGATTTTTAAGTCTAGCGACTTGTTCCAATGCTGTACCACAATCTTTCTATTTCTGTGAAAATTGAGATTATGTTCAAGCAAATTCCAGGGGCGTGGTTATTAAATCTTTGAGAAAGCAACAGGCAACAGTGTGTGCGGTCATCAAGTGTTAAACGTTGTTACATACTCCAACTTCAATTTGGTAAATTCCCATGCTCAAAATGGCCAGATGCAGTAAGATGATAACATGTAAATGAACTGCATTCTTGAACAGAGTGCTATTTGAATTCTTCGAATTGATGCTATGAGTCAACTCTGATTTGTGCTGATAGAGGTTTCAGATAAGCACTAGGCACCTTTTCTTTTCTTTTTTTTTAAAAAAAAGTTGCATTGATTCACTCCAGCTGAATAAGGCTCACAGTGGCATGTGATTTATGAGAGCTAGCAGAGCCACATGGTTGCTTTGATATTACAGGCTTACAACACATTCAGTTTATGTTCTGTTGCAGATACCACCAAGGAAGGGGAAAGGAGCTCAGACTGACAAGGTCCAATGCTATGAGCCAGCAACTATGAAATACTTGGGATACTTCCCTGCATTGACGCCTGATGAGGTATATTGCTGGCTTGCTTTTGTTAGGTCCTTTAAATACAACATATAATGTAGGGTTTAGTTGTCTGGGTCATTATCTTTTGGATTATTAACTGAGATCTAGTTCGTCGTTCATAATCGATTTTGATTTTCTGAAGTAGTGATCAAGGAACAAATAAATTTTGTATCTTTTTGTTACTGCAGTTTCTTGTAACTTCATTAGCGTGACATCCTACTTTGTTTTGGTTGCCTTTAATTCTTTGACTAATCAGGTTAAGGAGCATGTTGCGCAAGCCAGGAAAGCACAAAAGATATGGGCAAAAAGCAGCTTCAAGCAAAGACGCCAGTTTCTTCGAATCCTTCTAAAATATATACTTGAACATCAGGATCTGATATGCGAGTAAGGACATAATTCAAAATGGCATCTTATCTTTAAATTAGTCTAGACGCTGTTGGTTGTGCTTTCTATTTTCATTATCTCGCATCTGTTCATGAAGGCCTGATCAATTTCTTCTTTTATTGCACCTTTGCACCTGATAACATTTTCCAGAACATGGAATATCTGAGGGTAACTACATTTTGTGCTGTGCAGGATATCATCCCGGGACACTGGAAAGACTATGGTTGATGCTTCATTAGGTGAGATAATGACCACCTGTGAGAAGATTACCTGGCTTTTGGATGAGGGTGAGAAGTGGTTAAAACCTGAATACAGGTTAGACTCTTAGAAACATTCCTATTTGAAAGACAGAGTAACTTAGGGCCTTGTATATTGTGTCAATGATTATATTAACTTTTCTATGTTAGCTTACTTTTGTTTTCACCACTTTGTCTTTACGATGTGCAATAGGATGTGATTATATGGGACCGTCTGGTAGCTCAACAGGTGTGAGCATTGGAAATACACAGCAAATGAACTCTGGTCTTGAATACAAAATGAACTACCTATTAAAAGTTTAAAACCTCAAAATAGTTGGGAATTCTACAGACATTGACTCACAACTTATGTTAGTTCTTTCACAGGAAAGATAAGCCTTTTCATTTATGCATGCAGCCACACATTAATATTCTGTAACATAGGAAGTTAGCAATTAGGTACTGTGGCACCATTGCTGAAGTCTTCCTTTCTTTACACCTGAGGTGATACCTTAGCGTGTTTGGATGATGGATGGTACTCAAGGAATTTTAGAATTTTGGTTTGGATCCAAGTCCCCATATCCTCACAGACCTGAGCTTGTTTTCTCCCAACAAACTCGTGCTTTCTTCAATTATTACCTTATCCTAATTAAATACAAGCATTCCCCTACTTGCTTTTAATTTTAGTTCTGCTCAGGTCCTGTGGGAGATCAATGCTTCACAAGAAAGCAAAAGTTGAGTTCTATCCACTTGGAGTTATTGGTGCAATTGTGTCTTGGAATTACCCCTTCCACAATGTATTCAATCCAATGCTGGCTGCAATATTCTCTGGTAATGCAGCAGTTATAAAGGTAAGCCATCAGATGTTGCTTTTTTGTACTCCCTTTGTTCATATACATATGACATTTAGAATTTGAATGGTCAAACGTCCTCAGCTTTGAACACTGATAGAGATATTCAGATTAACAGTTCTCATCTAAGAGATAGCATATTCACATAACCATACTGTACTAATTATATCATTAACATTTTTTTGCTATGCTAAGCGAAACATCTGCAACACTACTCTGCCATACGAATATTGTCTTTTGCTGCAAATAAGAACTACTTTTCATTTTAATCACCGGAATTCATTTTTTATCTAAGCTAAATACTATTCAACTCTATTTATATATTTGATCAGCAAGATGCCCTTTTATAGGTTTCAGAGCATGCAAGTTGGTCAGGCTGCTTTTATTTTCGTATCATACAAGCAGCTCTTGCAGCTGTTGGTGCACCAGATAATCTGGTGCATATAATAACTGGGTATGAATACTACTCTGCATTTCTTTAGCATTCAGGATAATTGCTTACCATGGCTTACTTGGTCTCTTTTTTTTTGGCTTGTTTATAGTTTTGCGGAAACAGGTCAAGCTCTTGTATCTTCAGTCGACAAAATAATATTTGTTGGATCACCTGGTGTTGGAAGGATGGTATAGCTTTCCTCTGAACTAGTGGTTTCTTAATCTCATGCTGCGGCCAATTTTTATACTGCTGTAGATGTGCTGAGAAGTGTTGTTTTGCTCACTTTGGGACACTAAATCAATTAATCATGTTCAGTTATGCATTTTATAGCTACAGATTCTGTTTCAGAACTGATGTGCTTCTATTTTGTATATGGAATCAACCTGTCTTCTAGCATATAACTTTTAACTAAAGCAAATTCAGGGAGCATTATAAAAATGTAGTCCTACTTGTTGTTTGAAGTTTATGTACTTGTTTGAAGTTCTTGTCCACGTTTACTGTCCTCTGTTCTAATGTTCTGTTTAATGCTTGCCACAGATCATGAACAGAGCATCGGATACATTAATACCTGTAACTCTTGAACTTGGTGGTAAAGATGCATTTATTGTATGTGAAGATGTAGACTTACCCAGTGTAAGTGTAATTTAGTGTTTCTTTGTCATGAAGAGCATGTTTTCTTCAACAATGTGCCATTTCTTTTGAGAAGCATATTTTCTGAACGAGCACTGCAACTAAACCATGGCACTTAATTACTTGAAGGTTGTTCAAGTTGCTGTGAGAGCTGCCCTGCAATCTAGCGGACAAAACTGTGCTGGTGCTGAAAGATTTTATGTTCACAAGGATATCTATTCAACATTTGTTTCCCAAGTGGTGAAGATAATCAAATCTATATCTGTCGTAAGTACACAAAATTGTACTCTTAAGTCGGTACTGACATGCAATTTGTATTGCCTTTCTTTTGATTTTGACCAAGATTACAGACCTGTGGCAAATCATATTCATGTATGTTCAAATTATTCCTGGATACTGTTACTGTGCTTCATCTTGCAAGTGCAAAATTGCAGATTAACAGCTAACCTGGCAGTGTAGTTTTGCATTTCTAACATTCTGTATAACTTCATACTGTATTCACACGGCTAAATCTTCTGAGTCTTTTCAGTTTAGAGCTATCTGAAATATGTATATTAAGCTATTAGTTTCTTAAGGTGTCCTAACAACCTTATTTAAGTTTTCAGATATTAGTTTCCAACGTATTTTTAATTCATGCTGGTAATCTTGCCTCAGCGCTTATCTTTTGGTTTGCTCCATTGCTCTTTTGTCTTTTCCTAGGGTCCTCCATTATCTGGCAGATACGATATGGGTGCTATCTGTATGATAGAGCACTCTGAGAAACTTCAGAATCTTGTTAATGATGCTGTTGACAAAGGTGCTGAGATTGCTGGCAGAGGGAGCTTTGGCCATCTGGGTGAAGATGCAGTAGATCAATTCTTTCCTCCAACTGTCCTGGTGAATGTTAATCACACAATGAAAATTATGCAAGAAGAGGTAAGCCTGAAAGAATGCCTCACGTCTTTTTGAACTAACGCTATTAGTGTTGCCAATGCTCTTTGCTGGTTTACAGGCATTTGGACCTATTCTGCCAATCATGAAATTCAATTCCGATGAAGAAGTTGTCAAACTTGCCAATGACTCCAAGTACGGTCTTGGTTGTGCTGTCTTTTCTGGCAACCAGAAGCGTGCCATCAAAATAGCATCCCAGCTACACTGTGGTGTTGCAGCAATCAATGATTTTGCTTCAAGTTATATGTGTCAGGTAGGTAATTAGAAGTTTCTAGTTTGTGTTATATTCTTTGAAATAGTCAACAGAAAACACCAGTATGATAATCTCTAACCATGGAAAGATCTCTTGCAGCTCACATGCTTATCTTGTAGTAATGTTTGGCATTTCATTTATTGTATTACTGAAAGCATGTTTTTCTTCATTGCTCGGTGTTATCCTGCCTATATAAGTATGCTTCTCTTTCTTGGTGCAGTCTTTGCCATTCGGTGGTGTCAAAGATAGTGGATTTGGAAGATTTGCTGGTGTGGAAGGTTTGCGGGCTTGCTGCCTTGTCAAGGCAGTTGTAGAAGATAGATGGTGGCCATATGTTAAAACCATGATCCCAAAACCTATTCAGGTATGTTAATTCCCAGATAAGTAGTCTGAAAAAAATTGTATGGCTTTACTACTTGTTCTGATACTCAGCTAATGATCTTTATTCAGTATCCTGTCTCCGAGAATGGATTTGAATTCCAAGAGTTGCTCGTTGAAACTCTCTACGGCCTTAGTGTGTGGGACAGATTGCGGTCACTTGTCAATCTGTTAAAGATGATTTCAGAGCAGAATAATTCTCCTGCTAACACCAGGAAGAAAAGCCGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023681