BGIOSGA023702

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Revision as of 05:59, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023702| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023702, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA023702

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023702, complete gene.

LocusTag

OSJNBA0008J01.18

Ensembl Transcript ID

BGIOSGA023702-TA

Ensembl Protein ID

BGIOSGA023702-PA

Length

2356

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26941536..26943891

Sequence Coding Region

26942601..26943891,26941536..26942167

Genome Context

<gbrowseImage1> name=IndicaChromosome07:26941536..26943891 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:26941536..26943891 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCATCTCAGTATTAGAAATCCTTTGTCTCTTCTGCTCTCACTGCAGTTGTCACTTTTGTTGTTCAATCCCTTGTCTGTAGCAGACTTAGCCTCTGAAAAGCAAGCCCTTCTAGACTTTGCCTCTGCAGTGTATCGTGGCAACAGGCTCAACTGGAGTCAAAGCACATCATTGTGTTCTTGGCATGGCGTAAAATGCTCAGGAGATCAGTCACACATATTTGAATTAAGGGTACCAGGTGCTGGTCTCATTGGAGCAATTCCTCCAAACACTCTTGGAAAGCTTGACTCTCTCCAAGTTCTGAGCTTACGGTCTAATCGTTTAGCTGGAAGCCTTCCATCTGATGTGACTACGCTTCCTTCCTTACGATCCATATACCTTCAGCACAATAACTTTTCAGGAGATTTGCCTTCCTTTTTGAATCCTAACCTCAGCGTAGTGGACCTCTCCTACAATTCCTTTACCGGTGAAATTCCTATAAGCTTACAAAACCTTTCTCAGTTATCAGTCCTGAATTTACAAGAAAATTCTCTCTCTGGATCCATCCCTGATCTCAAGCTTCCAAGTCTGAGACTATTGAATCTGAGCAACAATGATTTGAAAGGCCAAATTCCTCAGTCGCTTCAAACATTTCCAAATGGCTCATTCTTGGGGAATCCTGGATTATGTGGGCCACCTCTAGCTAAATGCTTGCTTCCTGATTCACCGACGCCTTCACCAGCATCCCCTTCATCAGCACCAACTCCAATGTCAGCGCATCATGAGAAAAAGTTTGGCGCCGGATTCATAATTGCAGTTGCTGTTGGGGGCTTCGCAGTACTGATGTTTGTTGTGGTTGTGTTGGTTGTGTGTAATTCAAAGAGGAAAGGCAAGAAAGAGAGTGGTGTGGACTACAAGGGTAAGGGCACTGGTGTCAGAAGTGAGAAGCCAAAACAGGAGTTCAGTAGTGGCGTTCAGATCGCCGAGAAAAACAAGTTGGTTTTCTTGGAGGGTTGCTCCTATACCTTCGATTTGGAGGATCTACTGAGAGCTTCTGCAGAAGTCCTTGGCAAGGGAAGTTATGGAACTGCTTACAAAGCTATACTTGAGGATGGTACCGTTGTTGTTGTCAAGAGACTAAAAGATGTCGTGGCAGGAAAAAAAGAGTTTGAGCAACAGATGGAACTAATTGGTAGGTTAGGTAAACATGCAAACTTAGTCCCACTTCGTGCTTACTACTATTCTAAGGACGAGAAGCTCATCGTCTACGATTATCTCACCAATGGCAGTTTCTCAACCAAGTTACATGGTATCAGGGGTGTTACTGAAAAGACACCATTAGACTGGAGCACCAGAGTGAAGATAATCCTTGGAACAGCATACGGCATTGCACACGTTCATGCAGAAGGTGGCGCCAAGCTCACCCATGGCAATATTAAGTCTACAAATATCCTCCTCGATCAAGATTACAGTTCTTATGTTTCAGACTATGGTCTAAGTGCCCTGATGAGTGTTCCAGCCAATGCATCTCGCGTTGTGGTCGGTTATCGCGCTCCTGAGACCATCGAGAACCGCAAGATCACCCAGAAATCCGACGTCTACAGCTTCGGCGTCCTCCTCATGGAGATGCTTACCGGTAAAGCTCCACTCCAGTCGCAGGGCAATGACGATGTCGTCGACCTACCAAGATGGGTGCACTCGGTGGTCAGAGAGGAGTGGACAGCCGAGGTGTTCGACGTCGAGCTGATCAAGCAGCAAAACATCGAGGAGGAGCTTGTTCAGATGCTCCAGATAGCAATGGCTTGCACATCAAGGTCTCCAGATCGACGCCCATCGATGGAGGATGTGATCAGGATGATCGAGGGACTGCGCCATTCTGCTTCAGAGAGCCGAGCTTCCTCTGATGAAAAGATAAAGGACTCCAATCCACCATCGGTTTAG</cdnaseq>

Protein Sequence

<aaseq>MDHLSIRNPLSLLLSLQLSLLLFNPLSVADLASEKQALLDFASAVYRGNRLNWSQSTSLCSWHGVKCSGDQSHIFELRVPGAGLIGAIPPNTLGKLDSLQVLSLRSNRLAGSLPSDVTTLPSLRSIYLQHNNFSGDLPSFLNPNLSVVDLSYNSFTGEIPISLQNLSQLSVLNLQENSLSGSIPDLKLPSLRLLNLSNNDLKGQIPQSLQTFPNGSFLGNPGLCGPPLAKCLLPDSPTPSPASPSSAPTPMSAHHEKKFGAGFIIAVAVGGFAVLMFVVVVLVVCNSKRKGKKESGVDYKGKGTGVRSEKPKQEFSSGVQIAEKNKLVFLEGCSYTFDLEDLLRASAEVLGKGSYGTAYKAILEDGTVVVVKRLKDVVAGKKEFEQQMELIGRLGKHANLVPLRAYYYSKDEKLIVYDYLTNGSFSTKLHGIRGVTEKTPLDWSTRVKIILGTAYGIAHVHAEGGAKLTHGNIKSTNILLDQDYSSYVSDYGLSALMSVPANASRVVVGYRAPETIENRKITQKSDVYSFGVLLMEMLTGKAPLQSQGNDDVVDLPRWVHSVVREEWTAEVFDVELIKQQNIEEELVQMLQIAMACTSRSPDRRPSMEDVIRMIEGLRHSASESRASSDEKIKDSNPPSV</aaseq>

Gene Sequence

<dnaseqindica>1..1291#1725..2356#ATGGATCATCTCAGTATTAGAAATCCTTTGTCTCTTCTGCTCTCACTGCAGTTGTCACTTTTGTTGTTCAATCCCTTGTCTGTAGCAGACTTAGCCTCTGAAAAGCAAGCCCTTCTAGACTTTGCCTCTGCAGTGTATCGTGGCAACAGGCTCAACTGGAGTCAAAGCACATCATTGTGTTCTTGGCATGGCGTAAAATGCTCAGGAGATCAGTCACACATATTTGAATTAAGGGTACCAGGTGCTGGTCTCATTGGAGCAATTCCTCCAAACACTCTTGGAAAGCTTGACTCTCTCCAAGTTCTGAGCTTACGGTCTAATCGTTTAGCTGGAAGCCTTCCATCTGATGTGACTACGCTTCCTTCCTTACGATCCATATACCTTCAGCACAATAACTTTTCAGGAGATTTGCCTTCCTTTTTGAATCCTAACCTCAGCGTAGTGGACCTCTCCTACAATTCCTTTACCGGTGAAATTCCTATAAGCTTACAAAACCTTTCTCAGTTATCAGTCCTGAATTTACAAGAAAATTCTCTCTCTGGATCCATCCCTGATCTCAAGCTTCCAAGTCTGAGACTATTGAATCTGAGCAACAATGATTTGAAAGGCCAAATTCCTCAGTCGCTTCAAACATTTCCAAATGGCTCATTCTTGGGGAATCCTGGATTATGTGGGCCACCTCTAGCTAAATGCTTGCTTCCTGATTCACCGACGCCTTCACCAGCATCCCCTTCATCAGCACCAACTCCAATGTCAGCGCATCATGAGAAAAAGTTTGGCGCCGGATTCATAATTGCAGTTGCTGTTGGGGGCTTCGCAGTACTGATGTTTGTTGTGGTTGTGTTGGTTGTGTGTAATTCAAAGAGGAAAGGCAAGAAAGAGAGTGGTGTGGACTACAAGGGTAAGGGCACTGGTGTCAGAAGTGAGAAGCCAAAACAGGAGTTCAGTAGTGGCGTTCAGATCGCCGAGAAAAACAAGTTGGTTTTCTTGGAGGGTTGCTCCTATACCTTCGATTTGGAGGATCTACTGAGAGCTTCTGCAGAAGTCCTTGGCAAGGGAAGTTATGGAACTGCTTACAAAGCTATACTTGAGGATGGTACCGTTGTTGTTGTCAAGAGACTAAAAGATGTCGTGGCAGGAAAAAAAGAGTTTGAGCAACAGATGGAACTAATTGGTAGGTTAGGTAAACATGCAAACTTAGTCCCACTTCGTGCTTACTACTATTCTAAGGACGAGAAGCTCATCGTCTACGATTATCTCACCAATGGCAGTTTCTCAACCAAGTTACATGGTATGCTTTTCTTCCTTTCATCCTTTTTGCAAGACACTGGTACATGTATAGACTCATAGCTGCGGTGGCTAATGAGTAAACATAAGAAGAGTCCCACATTAGTTAAAAGGTGAACGCCTACACTGATTAAGTTTAAAATTTGTAAACTGATATATCCATGCGATGTTAATAAAGTTTAAACTAACACAGGATATTAGTGATTTTAATTTTTCACTACAGCTGAACTTGCCTAAAGCTGCATCCATATTCCTTCTGTAGCTAGCTTAAGTAGGGAGTCTAATCATATTTTCTTGTATCAATAGAAAGTTGTACAGCCCTCCTGCACACTAAAAAAATGCTCATACTCAGAAATGAAACTTGTGTTAAATAAATGTGAATAGTTAACTTTCAGTTGGTAGTATTTTGTACTGATTTGCTGATGAACATTCGGCAGGTATCAGGGGTGTTACTGAAAAGACACCATTAGACTGGAGCACCAGAGTGAAGATAATCCTTGGAACAGCATACGGCATTGCACACGTTCATGCAGAAGGTGGCGCCAAGCTCACCCATGGCAATATTAAGTCTACAAATATCCTCCTCGATCAAGATTACAGTTCTTATGTTTCAGACTATGGTCTAAGTGCCCTGATGAGTGTTCCAGCCAATGCATCTCGCGTTGTGGTCGGTTATCGCGCTCCTGAGACCATCGAGAACCGCAAGATCACCCAGAAATCCGACGTCTACAGCTTCGGCGTCCTCCTCATGGAGATGCTTACCGGTAAAGCTCCACTCCAGTCGCAGGGCAATGACGATGTCGTCGACCTACCAAGATGGGTGCACTCGGTGGTCAGAGAGGAGTGGACAGCCGAGGTGTTCGACGTCGAGCTGATCAAGCAGCAAAACATCGAGGAGGAGCTTGTTCAGATGCTCCAGATAGCAATGGCTTGCACATCAAGGTCTCCAGATCGACGCCCATCGATGGAGGATGTGATCAGGATGATCGAGGGACTGCGCCATTCTGCTTCAGAGAGCCGAGCTTCCTCTGATGAAAAGATAAAGGACTCCAATCCACCATCGGTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023702