BGIOSGA023709

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Revision as of 05:59, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023709| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023709, complete gene.| tag = OsI_273...")
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Gene Name

BGIOSGA023709

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023709, complete gene.

LocusTag

OsI_27346

Ensembl Transcript ID

BGIOSGA023709-TA

Ensembl Protein ID

BGIOSGA023709-PA

Length

6368

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26872232..26878599

Sequence Coding Region

26878442..26878599,26877531..26877612,26877338..26877439,26876553..26877271,26876281..26876377
,26875521..26875695,26874967..26875043,26874058..26874462,26873881..26873930
,26873527..26873640,26873352..26873419,26872232..26873028

Genome Context

<gbrowseImage1> name=IndicaChromosome07:26872232..26878599 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:26872232..26878599 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGGATGGCTGCGGCGGCGGCGGCGTTGGTGGCGGCGAAGAGGTGCATGAACGCCGCGTGCGGGGCCCCGGCCCCGTCCCCGGCGGGAGGGGAGTGGAGGAAGGGCTGGCCGCTGCGATCCGGTGGCTTCGCCGTGCTCTGCGACAAGTGCGGGTTGGCATATGAGCAGCTTGTGTTTTGTGATATATTTCACCAAAAAGAATCTGGCTGGAGGGACTGCTCATTTTGTGGGAAGCGTCTCCATTGTGGATGTATTGCTTCGAAGAACTCCTTTGATCTACTTGATAGCGGTGGAGTTCAATGTGTCACTTGCATTAAAAATTCAGCAGTTCAATCTGTTCCAAGTCCAGTCGTCCCCAAGCTTTTTTCATCCCAAAATAACCAGAGACTTTTTGGCAAAAGCGATGATTTATTGTCTGGTAGACCACTGGAGACATCCTCCCTTATGGTCAATGCCAGAAACGATGATCTTACTATTATCGCTAAGAACAACCTTCCATTCATGGTGAAAAACGTAGAAGCTGGGCAAAGCAGTAATATTTTGAGGCAAAAAGAACTAGAGAATGGTGCGAGGCAGATTAAATGGGAACTACCTACCCTTAGTATCGGGGACATGGGAAGGATACCTTTCCTAACTAGATCTCAAAGTGCATTGGAGTCTCGAAGAGATGAAAATAAAGACCCAACTACAGAAAGCACGACAAGTGAATCACTTTCTGAGGCATGCCTCAACATGAGCTTGGGAATTGCTAGTAATGGAAACAAGTTGGAGGCTACTTCAACTGTGGAAAGACCTATGCTATCACCAACAACAGGATTTCCTGAAGGAAGAGAGCTTACCACTGCATTATCTCCATTTCAGCATGCACAAAGGGCTCGTCATTTTCTGACCAGACCGCCAAGGGTTGGTGAAGGTGCTGTTTTTGATCCAACGAAAGATATGCTTCCGCATCTTCGTGTTGCAAGGCCACCTGCAGAAGGTAGGGGCCGCAATCAATTACTTCCTCGATATTGGCCTAGAATAACAGACCAAGAGCTACAGCAAATTTCTGGAGATTCAAATTCCACCATTGTCCCCCTGTTTGAGAAGGTTCTAAGCGCCAGTGATGCAGGCCGCATAGGGCGCCTTGTTCTACCAAAAGCCTGTGCAGAGGCATATTTCCCTCCAATTTCTCAGCCAGAAGGTCGTCCTTTGACAATTCAAGACGCAAAAGGCAAAGAATGGCATTTTCAGTTCAGATTCTGGCCAAATAACAACAGCAGAATGTACGTCTTGGAGGGGGTTACACCATGCATACAATCATTACAATTACAGGCTGGTGATACAGTGACTTTTAGTCGGATAGAACCTGGAGGGAAACTTGTTATGGGCTTCCGGAAGGCCACAAACACTGTCAGTTTGCCAGACTCACAGATTTCAGCTATTGCCAACGGTTCCATTCTTGGGGATACATTATTTTCTAGTACAAATGAGAATTTAGCAATAGTAAGTGGTTATTCAGGATTTTTTCAGTCAATAAAGGGGGGTGCAGATACAAGCTCTATATACGATCATCATGTGAACTCAGCTGACGGGGATGTTAGTTGGCTTAAGACAGATAAATTCGGCAGCAGGCCAGATGAGGGGTCTTTGCAGTTTTTAAAGAGAGGCCGCAATATTGGTTCCAAAAGCAGGAGGCTTTCAATGGATGCTGAAGAAGCCTGGGAACTAAAGCTTTACTGGGATGAGGTTCAGGAGCTGTTGCGTCCTGCTCCAACTGCAAAACCTACTGTCGTGATGATTGAGGACTACGAAATTGAAGAGTATGATGAACCCCCTGTGTTTGCAAAGAGATCAATTTTTACCATCCGTTCTACTGGGGAACAAGATCAATGGATTCAATGTGATGATTGCTCAAAATGGCGCCGGTTACCACTTAATGTTATTGTTGCATCCAAGTGGACATGTGCTGACAACACAATCGACTCAAAAAGCTGTTCCTGCTCTGCACCTGAAGAATTAACCCCCAAAGAATTGCACATTGTTCTTCAGCAATACGAAGATATGAGGAGGCGAAGGAACAGCTTTGGTTTTAAGCAGAACATCCCCGAAATGGATGCGGTCAGCCTTGATGCCTTTGCCACTGCCGCAGTCTATGGTGATGTCGGGAACCAAGGTTCCCCTTCTGTTGCGACAACCACAAAGCACCCCCGGCATCGCGCTGGCTGCACCTGCATAGTGTGTATCCAGCCACCTAGCGGGAAGGGCCCGAAGCACAACCCAGCTTGCACCTGCAATGTCTGCATGACCGTTAGGCGTCGCTTCAAGACACTGATGATGAGGAAGAAGCAACGGCAGTCGGAGCGAGAGGAGGCCGAGGCGAGCAAGAAGATCGCTTGGATGAACAGAGATGAGCCTGAGGGAAGCAGCCTGTCAAGATCCCCACAGACGGTTGACACTACCCGAGACGGAGATGTGACCATGTTCGACAAGGTTGACATCAACAAGGGCCACATAGACCTGAACTTCCACCCTACTGCCGTCCGAGACGAGGAGCGGCATGGCGGGCAGCCTCGGGTGAGCATGGTCAGCCTCCTGGAGGTGGCCAACCGGCCACTGGAGAACTACATGAAGCAGAACGGCCTGACGAGCTTGGCTGGGGAGCAAGGGAGCTCCAGCACATGTACAGGTGCAGCCACGGTTCCGCAGCCGGCTCTGGTGGAGAGCGAAGAGCGGACGTCCAACAACGACGGCGGGCGTGTGGCGACGGCAGAGCAGCCGGAGAGCATGGCCGTCGACGAGGCTGGAGATAACCAGCCGGACAAGGCTGCCGGTGACTCTGCTGCTGCTTTAGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAGMAAAAAALVAAKRCMNAACGAPAPSPAGGEWRKGWPLRSGGFAVLCDKCGLAYEQLVFCDIFHQKESGWRDCSFCGKRLHCGCIASKNSFDLLDSGGVQCVTCIKNSAVQSVPSPVVPKLFSSQNNQRLFGKSDDLLSGRPLETSSLMVNARNDDLTIIAKNNLPFMVKNVEAGQSSNILRQKELENGARQIKWELPTLSIGDMGRIPFLTRSQSALESRRDENKDPTTESTTSESLSEACLNMSLGIASNGNKLEATSTVERPMLSPTTGFPEGRELTTALSPFQHAQRARHFLTRPPRVGEGAVFDPTKDMLPHLRVARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGRPLTIQDAKGKEWHFQFRFWPNNNSRMYVLEGVTPCIQSLQLQAGDTVTFSRIEPGGKLVMGFRKATNTVSLPDSQISAIANGSILGDTLFSSTNENLAIVSGYSGFFQSIKGGADTSSIYDHHVNSADGDVSWLKTDKFGSRPDEGSLQFLKRGRNIGSKSRRLSMDAEEAWELKLYWDEVQELLRPAPTAKPTVVMIEDYEIEEYDEPPVFAKRSIFTIRSTGEQDQWIQCDDCSKWRRLPLNVIVASKWTCADNTIDSKSCSCSAPEELTPKELHIVLQQYEDMRRRRNSFGFKQNIPEMDAVSLDAFATAAVYGDVGNQGSPSVATTTKHPRHRAGCTCIVCIQPPSGKGPKHNPACTCNVCMTVRRRFKTLMMRKKQRQSEREEAEASKKIAWMNRDEPEGSSLSRSPQTVDTTRDGDVTMFDKVDINKGHIDLNFHPTAVRDEERHGGQPRVSMVSLLEVANRPLENYMKQNGLTSLAGEQGSSSTCTGAATVPQPALVESEERTSNNDGGRVATAEQPESMAVDEAGDNQPDKAAGDSAAALA</aaseq>

Gene Sequence

<dnaseqindica>1..158#988..1069#1161..1262#1329..2047#2223..2319#2905..3079#3557..3633#4138..4542#4670..4719#4960..5073#5181..5248#5572..6368#ATGGCGGGGATGGCTGCGGCGGCGGCGGCGTTGGTGGCGGCGAAGAGGTGCATGAACGCCGCGTGCGGGGCCCCGGCCCCGTCCCCGGCGGGAGGGGAGTGGAGGAAGGGCTGGCCGCTGCGATCCGGTGGCTTCGCCGTGCTCTGCGACAAGTGCGGGTACGCCTCCGCCTCTTCCTCTCTCGGTTCCTCCTCCTCCGCGCTAGCTTGCTGTGCGCGCCCATGGTGGTCCACGCGCCGCGGCTGAAATGGCTGGCTGCATGAATTAGCTGCTGTGCTCTTTTTTTTTTGGTTGTTTCCTGTATATCGTCTCGATGATTTCCCCTCTTTTTCTCCCTAAATTTATTTGTTTTTCCAACGGCTACAACTTGTGTTTATTGCTTGTTTGATGTGATTTTTACCATTACCATTTGTGGTGATCTCGTATTGGCGCCCAAATTAGTTGATTTATGAGGAAACTGTGCCGGGGTAGAAGCAACAGTGTTGCGCGTGTAGAATTTTTGGAAAGTGGAAAATCCGGTGAAACTTTGGAAGGTTGACTTGATGGCTCGTTGTGCGATTAGCTAGCAGTTAATTGAGTGGACATCATGCTCAACTGGGATTTCGATGATCGTTCAGTTACTTGCTGCACATGAGCTTCTCACAATTAAAATTATATTTGTGGTGACTTGTAACTGGATTGCTGTCCCGGATGACGTTTCCTGCGCTTTGGTGTAAAAAGGGGGGAATTTGTTTGCCAAAGCTCTATGAGTTGTCAAAATTGCTGCTTGGTAAAAAATAGATGTATTGTGAAATTGGTGTAGTTATGCAACCTGATTTTTCTTACAATTGATTTTTGGTGATGGAGAAAAACATATGCTTAGTTGAACAACATAAGGTTAAAGAGTGTTTTCTTCTGAAAAGGAGGTTACTTTAATCCCCTATACCAATTTGAAGTCCAATTTCCTTGATCTATCTATTTTGATTATGCCATTTATGCTTTATGTAGGTTGGCATATGAGCAGCTTGTGTTTTGTGATATATTTCACCAAAAAGAATCTGGCTGGAGGGACTGCTCATTTTGTGGGAAGGTGAGATGGTGACCTATGCTGTGAAATGTATGCACATTTTTGGTGCTAGATTGTTCTGCAACAGTAACTCTAAAGAACTTCACTATTCCAGCGTCTCCATTGTGGATGTATTGCTTCGAAGAACTCCTTTGATCTACTTGATAGCGGTGGAGTTCAATGTGTCACTTGCATTAAAAATTCAGCAGTTCAATCTGTAAGTTTGTTTGTTGCATATTTGTATTTCTTTTCCAAATTATCTGATTGTTCCTTTTTTTTGTAGGTTCCAAGTCCAGTCGTCCCCAAGCTTTTTTCATCCCAAAATAACCAGAGACTTTTTGGCAAAAGCGATGATTTATTGTCTGGTAGACCACTGGAGACATCCTCCCTTATGGTCAATGCCAGAAACGATGATCTTACTATTATCGCTAAGAACAACCTTCCATTCATGGTGAAAAACGTAGAAGCTGGGCAAAGCAGTAATATTTTGAGGCAAAAAGAACTAGAGAATGGTGCGAGGCAGATTAAATGGGAACTACCTACCCTTAGTATCGGGGACATGGGAAGGATACCTTTCCTAACTAGATCTCAAAGTGCATTGGAGTCTCGAAGAGATGAAAATAAAGACCCAACTACAGAAAGCACGACAAGTGAATCACTTTCTGAGGCATGCCTCAACATGAGCTTGGGAATTGCTAGTAATGGAAACAAGTTGGAGGCTACTTCAACTGTGGAAAGACCTATGCTATCACCAACAACAGGATTTCCTGAAGGAAGAGAGCTTACCACTGCATTATCTCCATTTCAGCATGCACAAAGGGCTCGTCATTTTCTGACCAGACCGCCAAGGGTTGGTGAAGGTGCTGTTTTTGATCCAACGAAAGATATGCTTCCGCATCTTCGTGTTGCAAGGCCACCTGCAGAAGGTAGGGGCCGCAATCAATTACTTCCTCGATATTGGCCTAGAATAACAGACCAAGAGCTACAGCAAATTTCTGGAGAGTATCCTTATTATATTTATCAACTTCTTGGTGATATTATGCATAAGTAGCTAACATACTTTGCGTATAATACAATCTCTGTAACTGATCAATCAGGGCGAATTATTTCATATTGTGCATACCTATTTCTGATCTGGATGCTATTTTGGTTTTCCTTAACTATATTTCTCTTCAAGTTCAAATTCCACCATTGTCCCCCTGTTTGAGAAGGTTCTAAGCGCCAGTGATGCAGGCCGCATAGGGCGCCTTGTTCTACCAAAAGCCTGTGCAGAGGTATTTTTTTGTTCACAACCTTTTGTGGTTCTGCCTCCTGTTAATAAAATTTTAGTGTTGTTACCTCATTACTGATTTATCGTTTTTGTATCATATTCCCTATTATTTAAAGATCCTTTGATACAAATGAGGATCAGGAACACCCTCCCATCCACATGTTACAAAAAACAATAACCTTTATTATGCTTTGACAAGATCTATGTGACTATATTATATAGTAGTATATGCACAAGAGTTAGGACTAGAAAGAAATACAGCCGATGTGGAACCTAATTTTACTACTTCACGTAAACACTGACATAGAATACCTGATCAACAGAGACCTAGGCCATTGTTACACTTGTTAGTATTGTTATGCTACTTGACATTCTTTGGTTCCCAACATGCTCAATAATCTTATATAAATAATTTATTTAAATATTTTCATGGTTACAGTATTTTGCAATAGAGCACTGCTACTTTACATTCTTTGCAAAATGGTTGCTAGCTACTGGGAGTGGGGACAATTGCTTCTCAGCATAACTATTTTAACATATTTCTTTTCATGTTTGCTGTCATCCTGAGTTGCCGAGATACATTTTGTAGGCATATTTCCCTCCAATTTCTCAGCCAGAAGGTCGTCCTTTGACAATTCAAGACGCAAAAGGCAAAGAATGGCATTTTCAGTTCAGATTCTGGCCAAATAACAACAGCAGAATGTACGTCTTGGAGGGGGTTACACCATGCATACAATCATTACAATTACAGGCTGGTGATACAGGTTAAATCTCAAATCCTTGGACATGATATCACCTGTTCTTTTTTTACAATTTTATTACTGATGCCTGATTACATATAAGCAATGATTTTCCTATTGCATACCTTCAAAGGATCTAACATAGTTCAAAAGTACTTCAAAACTATTTGGGAAAGCACTCATGGCAGTAAAGTTGCCAGTTGATAGGGGAATCTCCTTAAGTATTCACAAATGTCTAAATTGAGTGTACAGAATTTGAAAGAACAAATTGACCTACACATGGAATTGACAGGGACAAATAGGGGTCCTCCCATAGTCATTTAATTGTCACGTCTAGGTCAAAATTCAATGCCTGATTAATATTTCATGGTCATATCTTACTTGTTATAGGAATTTTGTGTGGTAATATATTTAAACATGCTAAGTAGAATTGTTCCATATTAAATGTGATCTCACTGGGAAGGTTTTCATACTTAATGGTGATTCTTGTTTTCTTTTCAGTGACTTTTAGTCGGATAGAACCTGGAGGGAAACTTGTTATGGGCTTCCGGAAGGCCACAAACACTGTCAGTTTGCCAGTAAGTTAGATTTTCCTAACATTCTTCCTACTAATTTATTTGGGAGCGTATCCTATGCACACAGGCCCTCGCGTGTACACACCGTGTACACCAACTAAAAATTATCACAAAAAATTTTAGGAAAATTCATACATGTACTTTCAATAGTATTACATCTACGTGCAAAGTCGCATCTTCAAATTCATTCTACATAGAGAATAACAAAAAAGATAATTCTAACAAAAATTACAACCATTAAAACTGTCAGATTTTTTGTTTTTTTTGTTACGGCTAAAATATAATGAATTTGACGTTAAGATTTTAACACACTAGGTGTAATACAATTGAAAGTATGGGTATGATTTTTTCTAGATTTTTTGGTGACATTTTTTAGTTAGTGTACACGTGTGTACACGTGAGGGCCTGTGTGCATAGGATATGTGCCAATTTATTTTCCTGGCAAATGCTTGTTTCACTTTCCTTTTTCCCTTCCTTTATCAATGTTTTTATGTTACTTCTGTACAGGACTCACAGATTTCAGCTATTGCCAACGGTTCCATTCTTGGGGATACATTATTTTCTAGTACAAATGAGAATTTAGCAATAGTAAGTGGTTATTCAGGATTTTTTCAGTCAATAAAGGGGGGTGCAGATACAAGCTCTATATACGATCATCATGTGAACTCAGCTGACGGGGATGTTAGTTGGCTTAAGACAGATAAATTCGGCAGCAGGCCAGATGAGGGGTCTTTGCAGTTTTTAAAGAGAGGCCGCAATATTGGTTCCAAAAGCAGGAGGCTTTCAATGGATGCTGAAGAAGCCTGGGAACTAAAGCTTTACTGGGATGAGGTTCAGGAGCTGTTGCGTCCTGCTCCAACTGCAAAACCTACTGTCGTGATGATTGAGGACTACGAAATTGAAGAGTATGATGTAAGTTTGCTGGCCATTTCATTATTCACGTTTGTGGGAAACATGAAATTCTGACTTCTTTTTTCTCAGCCCTCAGGAGAGGCCTTGGAATGATTGAATTTAATCTAACTATATTATACATATGCAGGAACCCCCTGTGTTTGCAAAGAGATCAATTTTTACCATCCGTTCTACTGGGTAAGAACCTTATTCAGAAGATACCGTTTAGTACTCTAGTTTTCATCATGAGGAAAACCATAAGTGGTGGAAATAAAACAACAAAAATATTAAGCGATTGTTTAGATTTCAATAGATATTGCCTTGGAGCTGTATGGTATTGATATCATTTTAAAGGGTTTGCCCTCTGCATAGACACCATACAAATATTCTCTGTGCCAGTGACTAATTTTTGCCAATACCTTACTGTGTATTTTTTAGGGAACAAGATCAATGGATTCAATGTGATGATTGCTCAAAATGGCGCCGGTTACCACTTAATGTTATTGTTGCATCCAAGTGGACATGTGCTGACAACACAATCGACTCAAAAAGGTATGCTGTTTGTGGAAAAACATTCTAGCCACACTTTCGTCATTTGATAGAACTGTTCATTGTACATCATGATTAGCTAACTAAAATTATTTCCAATATATTTGCAGCTGTTCCTGCTCTGCACCTGAAGAATTAACCCCCAAAGAATTGCACATTGTTCTTCAGCAATACGAAGGTATCCATGCTTTTCATATGCACGCCTTGATAGCAAGATGCTCTGGGCATGCCATAATGGACATTTGGAGGCTCTGACTTTATTTAAAAGGAATTTCGTGCATTTCAGGACATGTTACATCATTCTAGGAAAAAAGAACCTGCATATAGCATATAGCATGATAGTGGGCAAATAAAACATGGATAGTCTGGTATAATAGGCATCTCTTATCACAATTGAAATTGATAACAAGTATATAGGGACTGGGTAGCACATACTGCATCATTTCTGGTGACAAACTTGTAAAAAAAAAAGAAAAATCAATAACTTGAATATTACCACAGATATGAGGAGGCGAAGGAACAGCTTTGGTTTTAAGCAGAACATCCCCGAAATGGATGCGGTCAGCCTTGATGCCTTTGCCACTGCCGCAGTCTATGGTGATGTCGGGAACCAAGGTTCCCCTTCTGTTGCGACAACCACAAAGCACCCCCGGCATCGCGCTGGCTGCACCTGCATAGTGTGTATCCAGCCACCTAGCGGGAAGGGCCCGAAGCACAACCCAGCTTGCACCTGCAATGTCTGCATGACCGTTAGGCGTCGCTTCAAGACACTGATGATGAGGAAGAAGCAACGGCAGTCGGAGCGAGAGGAGGCCGAGGCGAGCAAGAAGATCGCTTGGATGAACAGAGATGAGCCTGAGGGAAGCAGCCTGTCAAGATCCCCACAGACGGTTGACACTACCCGAGACGGAGATGTGACCATGTTCGACAAGGTTGACATCAACAAGGGCCACATAGACCTGAACTTCCACCCTACTGCCGTCCGAGACGAGGAGCGGCATGGCGGGCAGCCTCGGGTGAGCATGGTCAGCCTCCTGGAGGTGGCCAACCGGCCACTGGAGAACTACATGAAGCAGAACGGCCTGACGAGCTTGGCTGGGGAGCAAGGGAGCTCCAGCACATGTACAGGTGCAGCCACGGTTCCGCAGCCGGCTCTGGTGGAGAGCGAAGAGCGGACGTCCAACAACGACGGCGGGCGTGTGGCGACGGCAGAGCAGCCGGAGAGCATGGCCGTCGACGAGGCTGGAGATAACCAGCCGGACAAGGCTGCCGGTGACTCTGCTGCTGCTTTAGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023709

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA023709&oldid=49303"