BGIOSGA023710

From RiceWiki
Revision as of 05:59, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023710| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023710, complete gene.| tag = OsI_273...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023710

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023710, complete gene.

LocusTag

OsI_27345

Ensembl Transcript ID

BGIOSGA023710-TA

Ensembl Protein ID

BGIOSGA023710-PA

Length

5032

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26865768..26870799

Sequence Coding Region

26870564..26870799,26869267..26869440,26867714..26867846,26866944..26867028,26866049..26866414
,26865768..26865784

Genome Context

<gbrowseImage1> name=IndicaChromosome07:26865768..26870799 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:26865768..26870799 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCAGCTCTGCACCCAGGACTGGATCCCGGCGGCGGCGCCCCTCTGCGCCTCCACCTGCCCTTGCCGCCTTGACGGTTGCCGCTTGGCGGCTGCTACTGTGCTACAGACCGCACCCCGCAGCTGCTCCCAGGACCCCGGCGACCGGCGACCGGTGCCCCTTGGCTGCTCCAACCTGCCGACTTGCTACTTCTGCCTGCTGCCATGCTCTGTCCGGAGGAGTACGAGAAGAGGCGCCTCCTTCGACGGCTTCGCCTTCGGGGCCGGTGCGGGTGGCCCCGGCACTGGCCTTGGGAAGCAGCAAGACGGAGCAGGAGGCGTGTTCTCCGAGGTTATGGAGGCTAAGAAGGCCATGTCCTCCGAGCAGCTGGCCGAGCTCGCCGCCATCGACCCCAAGCGCGCCAAAAGAATTCTAGCAAACAGACAGTCTGCAGCCCGATCAAAGGAAAGGAAGGCTCGATATATAACAGAGTTAGAGCGGAAAGTTCAAACTCTTCAAACTGAGGCTACCACACTGTCAGCACAACTGACACTATTTCAGAGAGACACAACCGGACTTTCTGCAGAAAATGCTGAGCTCAAGATTAGATTGCAAGCCATGGAGCAACAGGCTCAGCTGCGTGATGCTCTCAACGATGCACTGAAGCAGGAAGTGGAGAGGCTTAAGATTGCTACGGGTGAGATGGCAAAGTCAAATGATGCGTATAATACAGGAATGCAGCAGGTCCCGTACAGCCCTTCCTTCTTCCAGCTATCTGACCAACACGCAGTTCAGCACCATGCAGGCGTTCAGCAGCTGCCACATCAATTCCAACAACCTCATCCAAGTGTCCCTAGCCACCAGATGCTATCCCACCCAAATTCCCTCTCTGATATGATGCAGCAAGACTCGCTTGGGCGGCTCCAAGGGCTGGACATTGGCAAAGGACCAGTGGCTGTGAAAAATGAGGCAGAGGTAGTGGTGAAGTCTGAGGGTAGTTCAATATCTGCAGGGGGTGAGGGGCACTGA</cdnaseq>

Protein Sequence

<aaseq>MPQLCTQDWIPAAAPLCASTCPCRLDGCRLAAATVLQTAPRSCSQDPGDRRPVPLGCSNLPTCYFCLLPCSVRRSTRRGASFDGFAFGAGAGGPGTGLGKQQDGAGGVFSEVMEAKKAMSSEQLAELAAIDPKRAKRILANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLTLFQRDTTGLSAENAELKIRLQAMEQQAQLRDALNDALKQEVERLKIATGEMAKSNDAYNTGMQQVPYSPSFFQLSDQHAVQHHAGVQQLPHQFQQPHPSVPSHQMLSHPNSLSDMMQQDSLGRLQGLDIGKGPVAVKNEAEVVVKSEGSSISAGGEGH</aaseq>

Gene Sequence

<dnaseqindica>1..236#1360..1533#2954..3086#3772..3856#4386..4751#5016..5032#ATGCCGCAGCTCTGCACCCAGGACTGGATCCCGGCGGCGGCGCCCCTCTGCGCCTCCACCTGCCCTTGCCGCCTTGACGGTTGCCGCTTGGCGGCTGCTACTGTGCTACAGACCGCACCCCGCAGCTGCTCCCAGGACCCCGGCGACCGGCGACCGGTGCCCCTTGGCTGCTCCAACCTGCCGACTTGCTACTTCTGCCTGCTGCCATGCTCTGTCCGGAGGAGTACGAGAAGAGGGTAGGGGGTAGGGGCAGAGGGCCACACCTTGCCATACCGAGCCATTTGCCCCTGGGCTCAAGACGAGGCGCGCGGCGAAGACGGAGGAGATCCTCGCCGCCACGGAGAAGGCCCAACGCCGACGATGCCCTCCTCCACGGCGCCGCTTCCACCCTATGGCCCCACGCGCCGACGCCCTCCTCGACGCTGCCGCCGCTTGCGCCCTGTGGCCCCGCGCGCCGCCGACGCCCTACTCCCGCGTGCCTTCGCCGCCAGTCACGGCCGCTTGCGCCCTGGGGCCCCGCGCGCCGCCGCCGCCCTGCTCCCACGCAGCTGACACCCAATCGCTGCACCGGTGGCATCCTCAAACCCGTCGCCATCGGTGTCATCGTATTCGGCGGCGGCGGCGGGGAAGCAGGTGGGGAAACGGGAGCTCGCCCGCCGCCGCCCATGGAAGAGGCCGCGCCTTATCTCCGCCGGTGATAGAGAGAAATGGGGGAGAGAGATGAAGACGGCAGGAGATGGCGCAGAGAGGAGGAAGAAGAGGAGGGGTGATGATGACATGTGTGGCCCATGTTGGCCCCACAATATTTTATTAATTTGTATGAGAAACTGACATGTGGGTCCCATAGTTTTAATTGTTTTTCCGGATCGAATTGCCACGTAAGCGCCACGTCAATGCCATGTCAGATGAAGACCGAGTCAAAATAGCCACGTAGGCGCCACGTCAATGCCACGTCAGATGAAGACCGAGTCAAAATAGCCACGTAGGCGTCACGTCAGCTAAAACCGCTCTCAAAACCGCCAAGGGACCTCATCTGCACCGGTTTTGGTAATTGAGGGACCCGTTGTGTCTGTTTTTTCGGTTAAGGGACGAAAATCAGATTCGTTGACAAGTTAAGGGACCTCAGATGAACTTATTCCGTCACAAAAACAAGCCTGCACCGAGAAGCCAACCAGCCAGCCCAATGCATGTTGCATGGCAGTCACATTCCACATCACATGCTTCACCACCATAGCCGGAAGCAAGCAACCAAGGAAGAATACCAGATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGACCTCCTCCCCTCCCCGCCCCACCAAGCACCGCCACAGCGCCTCCTTCGACGGCTTCGCCTTCGGGGCCGGTGCGGGTGGCCCCGGCACTGGCCTTGGGAAGCAGCAAGACGGAGCAGGAGGCGTGTTCTCCGAGGTTATGGAGGCTAAGAAGGCCATGTCCTCCGAGCAGCTGGCCGAGCTCGCCGCCATCGACCCCAAGCGCGCCAAAAGGTGACGACACCCTTCGGATTCTCATGCTATCTTAGACTTGATTTGCTGGTTGGTAGGATTATTGGTACCTCTTGCTTTTGATGACCAACCAACGAAATATATATATATATATATATATATATATATATATATACACATTTATTGTGTTTACTCTTGAATTAGTGAGACTTTATTGTCTAGATATAGCATTAGATTTTGCAAGCAAAGAAAGGTGGTAGAAAAATAAATGTTAACAGAAACAAATCATTTCATAGTCTATTGAGGCCCAATATATGGTGCTAGTGGTCTGGAATCTCTATGGATAGTGAAAGGCAGCTTGTACGATAGGACTGCAGCAACCTGACCAACTGAATTGGATGTCCTGAAGGTCTCGCCTTCCTCGCTTACGCGGGCTTCTTTTCGGAACATAAGCACTCATACAGGTGGTTGAAATGCCAATTTCTTGTGTGGCAAGTTGCTTTCTTGGACCAAAAAGCCAATCCATGTTGTTTTGTACCAAAATAAGAAGGCCTTGGAGCGAACGACATATGTTCGTTATGTGCAATAATTTGTATATTTACTATGCAACACTTATTAGCTATAAATTCTCTACCCAAAACTGTTTCTTTTATCAAACTATTGTGCTGCAACCAAGTTATACAATATATTTTTTTGCGGGGAAGTTATACAGTATTTAACTGCGTATATTCATTATATAGGGTTTAATTCATGTCACTTAGTAAAACCTTTCCTCATTTGGCCCCACATTCTCTTCTCTCTTCAACAGTATTTTATAACAAAATATGCTTCTATATGTGATGAAACTGCATATAATAATTTTACTTATTCAATGATAACATGGTTGCAATGTCAACACTGTTCTATTTTGTGGTTTGTCTTAGAACAAAAAACTGCATCACTTTGTTTAGTCTTTAAATAAGCTGTGAGCGCAAGGCGAACGGGGCAGTAGTGGGAAGCACTTTGCTTTTGTGTTTCTTAAGCATGCACTCTTCTGATACTCTTTCCCCCTTTTCTCAAGGCCTTCTTTATTTCATACCTAAGGGCCATATATGCAGTGAACTTAGCATGGTCCACTTTCTTAAATATGTTTTTCTATTTGAAAATAACAGAGATATTTTTTTCCATTAGAGAATCACCATGTAGTGGTCTTTTAATCAAAATGCTGTACTACAATCAAGACTGTTAACGCACAGGTTCATGGTGTACGGTCATATATGCAACTGGTACTATAAGAGCAAACTTTTGTGCATAGCTCTACAACTTATGTAGTAATAATCATTATATTCAAAGACAGCTCTCCTTGATTTAATTAACCATTTGAACTTTATAATGTTAACTAAATCATTTTTAGCAAGTGCATTGTATCAGCTTTCTGCAGCTCATGAGTAAATGTAAAATTTCTGAGCTTGCTTTGGTGCAGAATTCTAGCAAACAGACAGTCTGCAGCCCGATCAAAGGAAAGGAAGGCTCGATATATAACAGAGTTAGAGCGGAAAGTTCAAACTCTTCAAACTGAGGCTACCACACTGTCAGCACAACTGACACTATTTCAGGTACCTTTTATCCATTTGTTTGTCTCATGGGTTGCAGTACTACTACTATGTTTAGTTCATCAGTGCAAAAACAATAATGTGCATAGTAAATGTGCCTTTTGAACTGTATTGAACAGGCAGTTGTGCCACTTACTAGTACATGTGCTAACCAAACTGCAACTTCTTTACAATTAAGTGGATCATCCATTAGTAGAACAATTTATTTGAACTGATGCATATGCCATGATAACTACTTCCTCCGTTTCACAATGTAAGTCATTCTAGCATTACCCACATTCATATTGATGTTAATGAATCTAGACATATATCCATCTAGATTCATTACCATCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAACGGAGGGAGTATAACACATGATAGGATTATGTGACTAGCTTTATGCTCATATTGGCTATAGCACATGTTGTGGAAAGGTCGAATTCTCATCCAAATATATTCTATATGGTTGACCAATAATTTGTTGAGCTGAATGGTGGTACCTAACAATGAAAATGTATGCTCTCTATTGACCAGGACTATTAGGTTCTAGTAACACTGTATTTTTTTTACTCTGTTCACTGTTGACCAGTATTCAAAGTTTGTGATCATGCCCATATTTTTGTATTAAAAGCTGTGAATATCCTTTTAAGACGTTTTGTTTTTCTGGGCAGAGAGACACAACCGGACTTTCTGCAGAAAATGCTGAGCTCAAGATTAGATTGCAAGCCATGGAGCAACAGGCTCAGCTGCGTGATGGTGAGCACTCTGCCCGTACATCTCAACTCTTGATTTTCGTTATTTCCAATAAACTTGTGTTGAAAGGTAGCTCGTTGCTGTAGGCTGGCTGCATACTTTTAGAAGATATCTTATCAACATTTGCTATTTCTTGTATGTAAGACATTGTGTTATCGTCGTTTTTTAATGCAAGTTTTATCATGCGATCTCAATCCTTTCCATTGTTTACTTTGGTAAATCTAATCATTTGTGAGAGCTCCAACACTTAGTTACCTTTTAGCTTCAATAGAAATCTTTCTGCATTACTTCACAATGGAACTAGCTAAAATTTTGCACTGCTGGTAAGTGCCATGCTCTATTGCTGAACATAAACTTATACTGAAAACTGATTCATCATTTTAGAGGATAAAGCTCTGTCATGTAAGGAATATTGAGATTTCTCAAGCTATTAGTATTGACATTTTGAACAACTTGTGAACATCTGAAACACAGCATAGATTAGGATACGTGTTGTTTTTCCTGCTAATAGAAATACCATATTGTTTCGCAGCTCTCAACGATGCACTGAAGCAGGAAGTGGAGAGGCTTAAGATTGCTACGGGTGAGATGGCAAAGTCAAATGATGCGTATAATACAGGAATGCAGCAGGTCCCGTACAGCCCTTCCTTCTTCCAGCTATCTGACCAACACGCAGTTCAGCACCATGCAGGCGTTCAGCAGCTGCCACATCAATTCCAACAACCTCATCCAAGTGTCCCTAGCCACCAGATGCTATCCCACCCAAATTCCCTCTCTGATATGATGCAGCAAGACTCGCTTGGGCGGCTCCAAGGGCTGGACATTGGCAAAGGACCAGTGGCTGTGAAAAATGAGGCAGAGGTAGTGGTGAAGTCTGAGGGTAGTTCAATATCTGCAGGTGAAAGCAACAGCACATTCTAATTATAGACCTACATGTCAACAAATTGCTCCGTCCGTTTAGTTTTCTTTGTTCATAGTCTGACATGCCTTCCTGAACTGCTTCCCTCTCTCCCACTAGTTTTTTTTTTTCAATTCAATTCTTTCAATTTTAGTTACATTGTTTGTTTGTTGATCATCGTGTGGCTGATCATGTAGAGACTTAGATATGCTCGTTTGGAGACATCGGGTTTATTTCTTGTGTGTTGTGTGTTGTTTGATTTAGGGGGTGAGGGGCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023710