BGIOSGA023711

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Revision as of 05:59, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023711| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023711, complete gene.| tag = OJ1205_...")
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Gene Name

BGIOSGA023711

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023711, complete gene.

LocusTag

OJ1205_F02.8

Ensembl Transcript ID

BGIOSGA023711-TA

Ensembl Protein ID

BGIOSGA023711-PA

Length

5501

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26855904..26861404

Sequence Coding Region

26861144..26861404,26859887..26860072,26859553..26859645,26859245..26859427,26858971..26859073
,26858710..26858883,26857457..26858490,26857169..26857351,26856109..26856803
,26855904..26855997

Genome Context

<gbrowseImage1> name=IndicaChromosome07:26855904..26861404 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:26855904..26861404 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGTACCGCGGCCGGCGGGACTACGGTGGCGGGTGGTGGTCGGCGTCGGGCGGCTCGGGGAGGATGACGCTGGCGGCGGTGATGGCGACGAGGGCGCCACGGCCGGCGTTTATCCGGCGGGAGGCGATCCGGGCGGCGGAGGCGGCCGCGGACGAGGTGGTGTTACGGGTGCAACCCACGGAGGAGGCGGAGCGGACGCGGCAGGGCATCATCGGCTACCTCAAGCTGCTCTTCGGCACCGCGCTCGGCTGCGAGGTCTTTGCATTTGGATCTGTTCCTTTGAAGACCTACCTCCCTGATGGGGATATTGACATAACTATACTTGGGAACACAGCTCCGGACAGCACTTTCATTAGTGAGGTTCGTGGTATACTTGAGTTAGAGGAGCAGGAAGATGGTGCTGATGTTGCAATCACGGGTTTGCAATTCATCGATGCTGAGGTAAAGCTCATCAAATGTGTTATTGACAATATTGTTGTTGACATCTCGTTCAACCAAATTGGTGGGGTGACCACACTCTGTCTTCTTGAGCTGGTTGACCATGAAGTTGGGAACGACCATCTGTTCAAGAGGAGCATTATGCTAATCAAGGCTTGGTGTTACCATGAAAGCCACATACTGGGAGCTCATCGTGGACTAATATCTACTTATGCCTTGGAAGTTCTTGTTCTTTACATATTCAATATATTTCACAAATCGCTGCATAGTCCCTTAGAGGTCTTGTATAAGTTTTTGGAATATTTTAGCAAGTTTGACTGGGATAAGTATTGCATAAGTTTAAATGGTCCTGTTCCTTTGTCATCCTTGCCCAACCTAACTGTTGAACCTTCAGGGATACATGATGAATTACTGTTTGGCCCTAATGGCTCGTGTGATAGACTTATTGTACTTAAAAAGGATTCTGATGGATCTAACATGAATTTTCGCCCGAAGTATCTAAACATAATTGACCCAATAAAGTCCAGTAATAATCTTGGCAGAAGCGTCAGCAAAGGAAGCTTTTACCGCATACGAGGTGCTTTCTCATTTGGTGCACAAAACCTGAGTCAAATTCTCATGTTACCTACTGACCTTATTCCTACTGAAATCTTTGGATTTTTTGTGAACACCTTGAAGAGCCATGGAAGAGGAAAAAGATCAGACGTTGGCAATAATGGTTCATTCGAACCGTCACTTGATCCTGAAAGTGAATATGCACTTTGGGAAGATTCATCAGACGTAAAAGAATCTGATATGAGTGAAGATGAAAATAGAAGTCCTGATCTGCAGAGGACTTCAGATAGTTGTTTTTACAACAAGGTATCAGGAGACAGTTTCAGTAGCCACTCACCATTTTCCCAAGAGAAGGGCAACAACATGAAACGACACTACGACTGTGCAAGAGAGGAATATTTACCCCTCGGTAGATCATCTATGGAGCAACATATTTATGCGAACAACCAGTCACAAATATTGACTCCCTCTACTCGTATAAATACTTTGGATGTTTCCAATTCTTGCCCAGCTGAGACAAATAGGAGCGATCTCCATGAAGAAAAACTGCCACTTTCTCATTTTTCACCATCAAATTTGTTGGATCTATCAGGAGATCTGGATTTGCACTTAGAATGCCTTCGAAAAGTTCAGTACCACCTGGAGTCCATGTTTGATTGGTTGATTCAGGAAGCAAGTTTTTCTGGCGCAGTAAACAATGACTCCTTCAATATTCCAACCCAGAGCAGCTTCTCAAATACTGATGGAAGGGCTCTAAGGCCATTGTTAGTTTCATCTGCTTATACCCAGAGAGGGAACCTATCTCGAGTTTACTGTTCGCATAGCACAAGAGAAATTTCTCAGAAATCAGTATCACGCACTGAGGTCCAAGTGAATGCGGTTTGTCAGCAGAATGTGGCATTGCCCTCTGGAACAAATAACAGATTGGCGTTGCCTCCATCTCCTGTCGCTGATTCTGAGAAATCTCCAGTTTCTCCGCTCCATAACACAGTGGATATTGTTGGGACGCATGGAGCTGGCATGCATACTCTCAATAATGTATCATTGCTTTCTGGAACAGATGTATTATCCAATGCATTCGCACAGCTTTCATTTCCTGCAGTTAATTCAGTTGACTATAAATATTGTTGGTCTTATACCACAACAAATAATCGTGCGACATCAAGTCAAAAAACAAACCGTGGGAAGGGTGGAACTGGCACATACATTCCCATAATGAATTATCATACTTACAAGGAACGCATATTCTATTATAATGGAAGAAGCCAGAGAGAAATGTTACCAGATCGGCCGTTCAAGATTAAAACTAACCCAATTGGCTACATTCGCCGGCGCAGTTCGCCTGAAATGGGATGTTCACGTTCAAGCAATGGCGGTATTACATTTGAAAATACAAGTCATACACCATCAAAGAAACAGGATCACTCAAGCAAAAGTACAGTTACAGCTGAAGGAAGTTTTGCTCAGGAGAGAGCACCAGCAAGCCAGGAATGGAATATTTGCACAAACATGAACATGGTTGACAGCCAAAAACCTGGTAATGATGAAGACCTTGTCAGACCAAACAATGAATCAAGGGAACTACGGACACTCCATCCATCAGAAGTGCAAAACAGGGAAATGACGGCATCATCATCATCTAGTGTGGAGCTTCCTCATTGTGTTGGCAATGGTCTCCAAGAATCCAATACATCTCAGCCATCCTCACCTGCAACTGAGGCTTCTTCTCCAATCAAAACAACACTAGTCGAAGGTCTTGAGTTTGGATCTTTCGAACCTATCTTAGGTACTAGTTTTCTCTGCGAAAAGTTTTGCGAAGAATTCCCACCTCTGCCTGCTAGAAAGTGGCCTGCAGTAGCCGCTGTTTCAACGCCTGTGACTGTGAGCTCTTCGCCTGCTGAAACAGGAAGCAAGCCAGAAGGGCTCTACCAACTGAGAGATGAAGCTGACTTCCCTCCTCTCAAGGCTGGTGCTCGCAATGGATTTAATCATAGAGTTGGAAGATGA</cdnaseq>

Protein Sequence

<aaseq>MAAYRGRRDYGGGWWSASGGSGRMTLAAVMATRAPRPAFIRREAIRAAEAAADEVVLRVQPTEEAERTRQGIIGYLKLLFGTALGCEVFAFGSVPLKTYLPDGDIDITILGNTAPDSTFISEVRGILELEEQEDGADVAITGLQFIDAEVKLIKCVIDNIVVDISFNQIGGVTTLCLLELVDHEVGNDHLFKRSIMLIKAWCYHESHILGAHRGLISTYALEVLVLYIFNIFHKSLHSPLEVLYKFLEYFSKFDWDKYCISLNGPVPLSSLPNLTVEPSGIHDELLFGPNGSCDRLIVLKKDSDGSNMNFRPKYLNIIDPIKSSNNLGRSVSKGSFYRIRGAFSFGAQNLSQILMLPTDLIPTEIFGFFVNTLKSHGRGKRSDVGNNGSFEPSLDPESEYALWEDSSDVKESDMSEDENRSPDLQRTSDSCFYNKVSGDSFSSHSPFSQEKGNNMKRHYDCAREEYLPLGRSSMEQHIYANNQSQILTPSTRINTLDVSNSCPAETNRSDLHEEKLPLSHFSPSNLLDLSGDLDLHLECLRKVQYHLESMFDWLIQEASFSGAVNNDSFNIPTQSSFSNTDGRALRPLLVSSAYTQRGNLSRVYCSHSTREISQKSVSRTEVQVNAVCQQNVALPSGTNNRLALPPSPVADSEKSPVSPLHNTVDIVGTHGAGMHTLNNVSLLSGTDVLSNAFAQLSFPAVNSVDYKYCWSYTTTNNRATSSQKTNRGKGGTGTYIPIMNYHTYKERIFYYNGRSQREMLPDRPFKIKTNPIGYIRRRSSPEMGCSRSSNGGITFENTSHTPSKKQDHSSKSTVTAEGSFAQERAPASQEWNICTNMNMVDSQKPGNDEDLVRPNNESRELRTLHPSEVQNREMTASSSSSVELPHCVGNGLQESNTSQPSSPATEASSPIKTTLVEGLEFGSFEPILGTSFLCEKFCEEFPPLPARKWPAVAAVSTPVTVSSSPAETGSKPEGLYQLRDEADFPPLKAGARNGFNHRVGR</aaseq>

Gene Sequence

<dnaseqindica>1..261#1333..1518#1760..1852#1978..2160#2332..2434#2522..2695#2915..3948#4054..4236#4602..5296#5408..5501#ATGGCGGCGTACCGCGGCCGGCGGGACTACGGTGGCGGGTGGTGGTCGGCGTCGGGCGGCTCGGGGAGGATGACGCTGGCGGCGGTGATGGCGACGAGGGCGCCACGGCCGGCGTTTATCCGGCGGGAGGCGATCCGGGCGGCGGAGGCGGCCGCGGACGAGGTGGTGTTACGGGTGCAACCCACGGAGGAGGCGGAGCGGACGCGGCAGGGCATCATCGGCTACCTCAAGCTGCTCTTCGGCACCGCGCTCGGCTGCGAGGTTCGTTCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTTTCGCAAACAAGTGCCGTGCCGCAAACAAAAAAAAAAAAAGAAGAATAAGCACTCGCTTGTGGGATGATGAGTTGATGGGCGCTTCCGTTTCGGATGGGATCGTTTTTTCTTCTTCTCGATCCCAATCGCGGGCGGCGTCTTTGGGGTTTGGTGTTAGATGAGTTGATGAGCGCGTGTGCGCTTAATTAATCGCTTCGCGTCCAGTTTTGCTGATGAGCTCATATGTCGCTTTCGTCTTTGCTCCGTTTCGGTGATTGCGATTAGGACTAACTGGTAGTTAATCGGTTCTTATTCTCGTACCCATCAGCTCATGCATCGAGAGGTCTTTTTCTAATGACATTTGTTTGACTAACCAGTCCTATTCTATTACTCGAGTGGCTCCAAATTGCTGTGCTGAGCGAGTGACATCATGTCGTCATGTCAGTTTTTGTTTTATAAAATAAGAGAAGATATTATGCTTTGGCCTTTTTGGTGGTGGCTTTTTTTACTAGCTTAGATGATCTAATAACTTTTTACCTTTCACCTTAGCGTAAATACAGGCTTCTTTTCAGCAAACATGAACGGTTAAACCCTTCCTTTTCACTGTGGTTTGTAGCTTTTTATTTATTTATTTTAATGACAGCAAATGTATCATTTCTAGCTCTATTGAAGGGGAAAAGGTTGGCTATCTAGCTTGCTCGTAAATGTGCTTGCATGCATGCAATCGGGTGCGGCGTGGTTTGGTCAACTGTGAGCTCGTTACATTTCTTGGTGACTCATCAGTCATCACATGCTTGGGCTAAGCAAGCAATGGATACTTGTTTATGCCGCCGTAGTGAAATCCTCTCTGCATGTTGTACTTGTAGATACAGCAGGATTTTGATTCTTGAGCCGGTGCAGTCATAGTGATCTTGCACTTTACACTATGTTGCATTCAGCATTCTCTAAGATGGTGTTTCTGTTTGATGATTTCAGGTCTTTGCATTTGGATCTGTTCCTTTGAAGACCTACCTCCCTGATGGGGATATTGACATAACTATACTTGGGAACACAGCTCCGGACAGCACTTTCATTAGTGAGGTTCGTGGTATACTTGAGTTAGAGGAGCAGGAAGATGGTGCTGATGTTGCAATCACGGGTTTGCAATTCATCGATGCTGAGGTGCATTTTTGTATGACATACTTCTGTTGAGTTATTTATTCCAGAGATAGTTTGGGTATAGTATGATATGGTCATATGGAGCTGTAACAATTTTTTTTACATTTTTCCATGTCTTTACATTAGTATCATGCATGATCTCTTAAGAAGGCAGAGATTTAACTATGTAGTTCTTACCTCTACATACGCTACTGATATATTTTTATACACCGTTTTAAAATACTGCTGTTGCTTTTGCATCCAGGTAAAGCTCATCAAATGTGTTATTGACAATATTGTTGTTGACATCTCGTTCAACCAAATTGGTGGGGTGACCACACTCTGTCTTCTTGAGCTGGTAATACATGGAAATCTGAACTATCTGCTCCATTTGGAAGTATTCATCTTGAATACTGCCCAGTAATTTCAACAAATATAGCGTGCAAAATTGATAACAAAGTTGAGTATATATTCCTTCTTCAGGTTGACCATGAAGTTGGGAACGACCATCTGTTCAAGAGGAGCATTATGCTAATCAAGGCTTGGTGTTACCATGAAAGCCACATACTGGGAGCTCATCGTGGACTAATATCTACTTATGCCTTGGAAGTTCTTGTTCTTTACATATTCAATATATTTCACAAATCGCTGCATAGTCCCTTAGAGGTACTTCTTGGTAGCATAACATTTTTCACAATTCTTATCAGCCTCTTTCTGAGATGGGTGGACTAAACTTTTTTTTTTTTGGATGAAACACCCAATGGCTTTTCAGCAGTTTAGTAAGGGAATTTACATAGGGACTAAAATTTTTGCATGGTACCTTCTTTGTTCAAACAGGTCTTGTATAAGTTTTTGGAATATTTTAGCAAGTTTGACTGGGATAAGTATTGCATAAGTTTAAATGGTCCTGTTCCTTTGTCATCCTTGCCCAACCTAACTGGTGAGTCATACTCAGGTATTCTTTTGCTTTGTCAAGTGATCGCCAAGCATGTACTTACTGGTCTAATTATTATAATCCCTGTGACAGTTGAACCTTCAGGGATACATGATGAATTACTGTTTGGCCCTAATGGCTCGTGTGATAGACTTATTGTACTTAAAAAGGATTCTGATGGATCTAACATGAATTTTCGCCCGAAGTATCTAAACATAATTGACCCAATAAAGTCCAGTAATAATCTTGGCAGAAGCGTCAGCAAAGGTCAGAATAACCTGGAGGCTACATCATTTTATCTTTCTTTATTCTGTGCGTTGTTTTCCTTTCTATATTCCACCACCACGTTCCTGTATGTGTGCTTACTCATGTAGAATAGGTACTGTGCTTGTGAAATAGGCATATGTTGCTAACTACATACATACATGAGATCTCTTTGAAGGATGGTTCTCATAGGTTTTGTACATCTATGTTTATTTTCTGCAGGAAGCTTTTACCGCATACGAGGTGCTTTCTCATTTGGTGCACAAAACCTGAGTCAAATTCTCATGTTACCTACTGACCTTATTCCTACTGAAATCTTTGGATTTTTTGTGAACACCTTGAAGAGCCATGGAAGAGGAAAAAGATCAGACGTTGGCAATAATGGTTCATTCGAACCGTCACTTGATCCTGAAAGTGAATATGCACTTTGGGAAGATTCATCAGACGTAAAAGAATCTGATATGAGTGAAGATGAAAATAGAAGTCCTGATCTGCAGAGGACTTCAGATAGTTGTTTTTACAACAAGGTATCAGGAGACAGTTTCAGTAGCCACTCACCATTTTCCCAAGAGAAGGGCAACAACATGAAACGACACTACGACTGTGCAAGAGAGGAATATTTACCCCTCGGTAGATCATCTATGGAGCAACATATTTATGCGAACAACCAGTCACAAATATTGACTCCCTCTACTCGTATAAATACTTTGGATGTTTCCAATTCTTGCCCAGCTGAGACAAATAGGAGCGATCTCCATGAAGAAAAACTGCCACTTTCTCATTTTTCACCATCAAATTTGTTGGATCTATCAGGAGATCTGGATTTGCACTTAGAATGCCTTCGAAAAGTTCAGTACCACCTGGAGTCCATGTTTGATTGGTTGATTCAGGAAGCAAGTTTTTCTGGCGCAGTAAACAATGACTCCTTCAATATTCCAACCCAGAGCAGCTTCTCAAATACTGATGGAAGGGCTCTAAGGCCATTGTTAGTTTCATCTGCTTATACCCAGAGAGGGAACCTATCTCGAGTTTACTGTTCGCATAGCACAAGAGAAATTTCTCAGAAATCAGTATCACGCACTGAGGTCCAAGTGAATGCGGTTTGTCAGCAGAATGTGGCATTGCCCTCTGGAACAAATAACAGATTGGCGTTGCCTCCATCTCCTGTCGCTGATTCTGAGAAATCTCCAGTTTCTCCGCTCCATAACACAGTGGATATTGTTGGGACGCATGGAGCTGGCATGCATACTCTCAATGTAAGAACCTTTGCAGCTTTGTTCATTAACTTTTTGTTGTCCACTGTTTCGAATTAGTTTCGCTTTCAATAAATTGACTCGATTCTTGTTTGTCCATATGCACAGAATGTATCATTGCTTTCTGGAACAGATGTATTATCCAATGCATTCGCACAGCTTTCATTTCCTGCAGTTAATTCAGTTGACTATAAATATTGTTGGTCTTATACCACAACAAATAATCGTGCGACATCAAGTCAAAAAACAAACCGTGGGAAGGGTGGAACTGGCACATACATTCCCATAATGGTGAGGACCCTTGGGACATAATCTACTCCCTCTGTTCCAAATATAAGCGTTTCTATGCATTTTATCTGGAGTTCTGGATGGAGGGATGTCTAGATACATTTTGGAAAACGTGCAGAAATGCTTATATTTTGGAATGGAGGTATTATTTCTTGTGCATGCTCCATGTTTTTAAACTTTGAAAAGTTTTTGTGTTGTGTAGATCAACTAATTATTTTATTGTTCCTTATGCTTCAATATTGGCATGGAAAGCTGGAAATGAGCTTTTGTTTAGGCTACACACGGAACCTCCATAGTAGTATAAATTATAAATCATGTATTGGTGCATTCTTAATAAATCCATGTAATTAGCTATTCACTTGTTACAGAATTATCATACTTACAAGGAACGCATATTCTATTATAATGGAAGAAGCCAGAGAGAAATGTTACCAGATCGGCCGTTCAAGATTAAAACTAACCCAATTGGCTACATTCGCCGGCGCAGTTCGCCTGAAATGGGATGTTCACGTTCAAGCAATGGCGGTATTACATTTGAAAATACAAGTCATACACCATCAAAGAAACAGGATCACTCAAGCAAAAGTACAGTTACAGCTGAAGGAAGTTTTGCTCAGGAGAGAGCACCAGCAAGCCAGGAATGGAATATTTGCACAAACATGAACATGGTTGACAGCCAAAAACCTGGTAATGATGAAGACCTTGTCAGACCAAACAATGAATCAAGGGAACTACGGACACTCCATCCATCAGAAGTGCAAAACAGGGAAATGACGGCATCATCATCATCTAGTGTGGAGCTTCCTCATTGTGTTGGCAATGGTCTCCAAGAATCCAATACATCTCAGCCATCCTCACCTGCAACTGAGGCTTCTTCTCCAATCAAAACAACACTAGTCGAAGGTCTTGAGTTTGGATCTTTCGAACCTATCTTAGGTACTAGTTTTCTCTGCGAAAAGTTTTGCGAAGAATTCCCACCTCTGCCTGCTAGAAAGTGGCCTGCAGTAGCCGCTGTTTCAACGCCTGTGACTGTGAGCTCTTCGCCTGCTGAAACAGGAAGCAAGTACGTGATTCTTACATTGCGATCTCGTGTTCTTTTTGCATTTCATGATACAGTCGTGCTGTTGCATTTTTTTTCTAATTAAATTGCATCATGTCGTGAATAAATCTGTAGGCCAGAAGGGCTCTACCAACTGAGAGATGAAGCTGACTTCCCTCCTCTCAAGGCTGGTGCTCGCAATGGATTTAATCATAGAGTTGGAAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023711