BGIOSGA023742

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Revision as of 06:00, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023742| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023742, complete gene.| tag = P0625E0...")
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Gene Name

BGIOSGA023742

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023742, complete gene.

LocusTag

P0625E02.119

Ensembl Transcript ID

BGIOSGA023742-TA

Ensembl Protein ID

BGIOSGA023742-PA

Length

3688

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26268024..26271711

Sequence Coding Region

26271655..26271711,26271451..26271561,26271174..26271248,26270946..26271075,26270760..26270851
,26270289..26270339,26270119..26270198,26269985..26270039,26269805..26269906
,26269649..26269700,26269524..26269569,26269394..26269449,26269161..26269212
,26269005..26269084,26268820..26268890,26268686..26268726,26268486..26268585
,26268336..26268407,26268168..26268245,26268024..26268059

Genome Context

<gbrowseImage1> name=IndicaChromosome07:26268024..26271711 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:26268024..26271711 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGCAAAGCTTTTGCTCTTACTGGTGGCCTCATCTCTATGTCTATCTGCTGCGATCGCTACGCAGCAAACCTGTCCGGCCGACCTCGATAGCAAGTGTGGTGATGCTGCTTCAGGGGATTGGGAAGGGGAGTTCTTCCCTGGCATCCCCAAGATCAAGTATGAGGGTCCAAGCAGCAAGAACCCGCTTGCTTACAAGTGGTACAATGCTGAGGAAGTGATTCTTGGGAAGAAGATGAAGGATTGGATGCGGTTCAGCGTGGCCTTTTGGCATACGTTCCGTGGTACTGGAGGAGATCCTTTTGGTGCCCCTACAAAGTCTTGGCCTTGGGAGGATGGCACAAATTCGTTGGACATGGCTAAGAGAAGAATGAGAGCTCACTTTGAGTTCATGGAGAAGCTTGGAGTTGACAGGTGGTGCTTCCATGACAGGGATATTGCCCCTGATGGCAAAACACTCACGGAAACAAATAAAAATTTGGATGAGATAGTTGAACTGGCAAAGAAACTCCAGGAGGAGACCAATATAAAACCACTGTGGGGGACTGCACAGCTTTTCATGCACCCGCGCTACATGCACGGTGCTGCTACTAGCCCAGAGGTTAAAGTGTATGCTTATGGTGCTGCTCAAGTTAAGAAAGCTTTAGAGGTCACCCACTACCTAGGCGGTGAAAACTATGTTTTCTGGGGAGGAAGAGAGGGTTACCAAACTCTTCTTAATACTGACATGAAGAGAGAACTTGACCATTTGGCTAGTTTTCTTCAAGCTGCAGTTGACTACAAGAAGAAGATTGGATTTAATGGAACACTCTTGATAGAGCCTAAACCACAAGAACCCACAAAACACCAGTACGATTGGGATGTTGCAACCACATTCTCTTTCCTACAGAAATATGGTCTAACAGGAGAATTCAAGATAAATGTTGAATGCAACCACGCTACTCTATCTGGACATAGCTGCCACCATGAGCTTGAGACTGCAAGAATTAATGGTCTGCTTGGGAATATTGATGCCAACACTGGTGATCCCCAGATCGGTTGGGACACCGATCAGTTCCTTACAGATATTTCAGAGGCTACTTTGGTTATGTCAAGTGTGGTTAAGAATGGTGGGCTTGCACCTGGTGGATTCAACTTTGATGCCAAATTGAGGAGGGAGAGTACTGATGTTGAGGACATGTTTCTGGCTCATATATCGGGAATGGACACCCTAGCCCGCGGCCTTCGGAATGTTGTCAAGCTGATCGAGGATGGTTCCCTGGATGAGCTTGTTCGCAAGCGCTACCAGAGTTTTGATAGTGAGATCGGTGCCTTGATTGAGGCTGGGAAAGGAGACTTCGAGACACTAGAGAAGAAGGTTCTGGAGTGGGGTGAACCCATTGTTCCATCTGGCAAGCAGGAACTGGCTGAGATTCTGTTCCAAGCTGCTCTATAG</cdnaseq>

Protein Sequence

<aaseq>MGAKLLLLLVASSLCLSAAIATQQTCPADLDSKCGDAASGDWEGEFFPGIPKIKYEGPSSKNPLAYKWYNAEEVILGKKMKDWMRFSVAFWHTFRGTGGDPFGAPTKSWPWEDGTNSLDMAKRRMRAHFEFMEKLGVDRWCFHDRDIAPDGKTLTETNKNLDEIVELAKKLQEETNIKPLWGTAQLFMHPRYMHGAATSPEVKVYAYGAAQVKKALEVTHYLGGENYVFWGGREGYQTLLNTDMKRELDHLASFLQAAVDYKKKIGFNGTLLIEPKPQEPTKHQYDWDVATTFSFLQKYGLTGEFKINVECNHATLSGHSCHHELETARINGLLGNIDANTGDPQIGWDTDQFLTDISEATLVMSSVVKNGGLAPGGFNFDAKLRRESTDVEDMFLAHISGMDTLARGLRNVVKLIEDGSLDELVRKRYQSFDSEIGALIEAGKGDFETLEKKVLEWGEPIVPSGKQELAEILFQAAL</aaseq>

Gene Sequence

<dnaseqindica>1..57#151..261#464..538#637..766#861..952#1373..1423#1514..1593#1673..1727#1806..1907#2012..2063#2143..2188#2263..2318#2500..2551#2628..2707#2822..2892#2986..3026#3127..3226#3305..3376#3467..3544#3653..3688#ATGGGGGCAAAGCTTTTGCTCTTACTGGTGGCCTCATCTCTATGTCTATCTGCTGCGGTAAGTGATCCTGACTAGTTAGTGATGTTTGATTTCTACGGTGGAAATGTGGTCTGGTTGTGGTTGTAATTCAGTTCTGTGTTGTGGTTGCAGATCGCTACGCAGCAAACCTGTCCGGCCGACCTCGATAGCAAGTGTGGTGATGCTGCTTCAGGGGATTGGGAAGGGGAGTTCTTCCCTGGCATCCCCAAGATCAAGTATGAGGTGAGGGAGGCCATGAAAGCTTACAGCTTTGATTAGATTATTGGATAAAGCTTGGAAATTTATATTATTGTATTGGACTATAACTGCTGTGACTCTTTGATTAGATTACTTGATAAAGCTTAGAAATTTTTAGATTGTTATATATTGGACTAAAACTGCTGTGACTTGTGAGCTAAGACTTTGTTGCACAATTGCACTGCAGGGTCCAAGCAGCAAGAACCCGCTTGCTTACAAGTGGTACAATGCTGAGGAAGTGATTCTTGGGAAGAAGATGAAGGTAGGGTTTATGAATTATGTCTTGTTGAACAGATCCTTTTATTCCCTTTTGCGTCATGGAATACATCTGAGTTTTGTATTTTATCTGCTTGCGTTTAGGATTGGATGCGGTTCAGCGTGGCCTTTTGGCATACGTTCCGTGGTACTGGAGGAGATCCTTTTGGTGCCCCTACAAAGTCTTGGCCTTGGGAGGATGGCACAAATTCGTTGGACATGGCTAAGAGAAGAAGTATGGCTATTACCTGGTTTCATGTTTAGGTTCAGTTCATTATGAATTTGCACGTTTGCTTAATCAACAACTTCTGTCTGAATTGTTATTGCAGTGAGAGCTCACTTTGAGTTCATGGAGAAGCTTGGAGTTGACAGGTGGTGCTTCCATGACAGGGATATTGCCCCTGATGGCAAAACACTCACGGTATGCCTTCATGCATAATAGTCTTATTATTTGTCTTCGAATGTGGTTTGAACTTGTGAAGCTCGAGGCTATAGCTATTTATCATGCCTACCCTTGGTTAACAGAGTAACTATTTTAATCATCTATTTAATTAAAACTATTTTAGATATTGGAAAAGCTCCAATCCTTTATATCTGAATATACCTTCAGAACAACACATAATATTTGGTCTTATGTACTTTTCAAGATGTGCTTTACTCCTGTGGAATATTTCTGTTAAATTTTTGGAATTTTATTTGGTCTTATTTACTTTTGAAGATGTGTTTTACTCCTGTGGAATATTTCTGTTAAATTTTTGGAATTTCTGGGTTTCTGTGTGATGTAGCTCTGGCCACCAGTGGAAGGTCTGGTATTTTATAAGCTTCTTGTTTCACATTGCAGGAAACAAATAAAAATTTGGATGAGATAGTTGAACTGGCAAAGAAACTCCAGGTTACATTTCTGCAACCTTAAAATTGTTAGCATTTTGTCGAAATGCATTGGTTCTGCTCTTTGCTCAGATATGATCTGAACTTCATGCAGGAGGAGACCAATATAAAACCACTGTGGGGGACTGCACAGCTTTTCATGCACCCGCGCTACATGCACGGTGCTGCTACTAGGTAGATCAGTTTTGCTGCATTTTGCATGTAAATTTGGAGTATGTTCTGAAGCTAATAGAAGCCTTCATTGGTACTGCAGCCCAGAGGTTAAAGTGTATGCTTATGGTGCTGCTCAAGTTAAGAAAGCTTTAGAGGTGGGTTATCTTTGAACTCTGAACATTGTGATAGGTTTTCCATAAGTCAATTCTTGATTTGGCTTTTACCACTTGAAGGTCACCCACTACCTAGGCGGTGAAAACTATGTTTTCTGGGGAGGAAGAGAGGGTTACCAAACTCTTCTTAATACTGACATGAAGAGAGAACTTGACCATTTGGTATGAGTCTTGACATATTGTTACTGTTCCTCTGTTTCTGTTACACTTACTACCACTCACTTTATCTCCATTTTGATTTATCATTTTGCCGTGTTGTCATCCAGGCTAGTTTTCTTCAAGCTGCAGTTGACTACAAGAAGAAGATTGGATTTAATGGTACTCACATGTCACTGCTATATCACATTTTTCCATGTATGACATGGATATAATACTGAATTTTGTTTTTATTTTTCAGGAACACTCTTGATAGAGCCTAAACCACAAGAACCCACAAAACACCAGTATGCTTATTAGTTTACATTAACAAAATGTCCACAGGATTAAACAATCCTAACCCTTGTTTGTCCTCTCCCAGGTACGATTGGGATGTTGCAACCACATTCTCTTTCCTACAGAAATATGGTCTAACAGGTACATATGTAGTTTGTTATTGGGTTTACAGTGATTTCGAAAGTTGAACTGTTATTTGGATTTCAGGAATTCATGTATTAACACCATTAGTGTTTTGAACAATTTTATTTACTGCTGTCTGTCTGGAGTTAACCGTGTATTGTGAAATAATCTAAAGTACATTCTTTTTCACCATATACAGGAGAATTCAAGATAAATGTTGAATGCAACCACGCTACTCTATCTGGACATAGGTTAGTTTCTTGCTTCCCTAACGTCATTCAAGGTAGCTTACAGTGGCAGTGTCATAACTCCATGGAAAATTTGCAGCTGCCACCATGAGCTTGAGACTGCAAGAATTAATGGTCTGCTTGGGAATATTGATGCCAACACTGGTGATCCCCAGATCGGTATGTGCGCATGCCTTTAGCTCCTGAAAGTCACATTATGCCTGAAATTCTTGTTTGATTTCGATTTGTGACATACATAGGATATAACATTTCAATGCTTATATATATGGACAGGTTGGGACACCGATCAGTTCCTTACAGATATTTCAGAGGCTACTTTGGTTATGTCAAGTGTGGTTAAGAATGTGAGTTGAATTAATAATATGTTGCCTTGATATATTCAGGTAATTATCAATATGATACTATTCATGAGTTGTAATGTTTTGATATGGTTGTAGGGTGGGCTTGCACCTGGTGGATTCAACTTTGATGCCAAATTGTTGGTTCCCGCTGACATTGTTTTTTTTTTTTGTGTGTGTGTAAATTGGTCTCTGATTCAACTGAATTTCAATTGACTTGGAATTCTATTATGTCAACAGGAGGAGGGAGAGTACTGATGTTGAGGACATGTTTCTGGCTCATATATCGGGAATGGACACCCTAGCCCGCGGCCTTCGGAATGTTGTCAAGCTGATCGAGGTAACTGGAACATTACAGCCTTCTAAAGTTTTTATTCAGGGATCTAGATGTAATCTTTTTATCTCTTTCTGCTGTTAGGATGGTTCCCTGGATGAGCTTGTTCGCAAGCGCTACCAGAGTTTTGATAGTGAGATCGGTGCCTTGATTGAGGTACAATGTTCAACTACTTTAGAGCTCTTGCTTTCTTACACTTGGATGATTGAATTGAAACAGTAACAATTGGCTCATGGTTTCAAATAGGCTGGGAAAGGAGACTTCGAGACACTAGAGAAGAAGGTTCTGGAGTGGGGTGAACCCATTGTTCCATCTGGCAAGCAGGTAACTGGAATTATAATATACGCATTTAACTTCATAGTATAATAGAAATATCTTTGGGTTGATGATTGCTCATTTTTAACTTTGCTTTCATGTGATTTCTCAATACAGGAACTGGCTGAGATTCTGTTCCAAGCTGCTCTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023742