BGIOSGA023822

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Revision as of 06:02, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023822| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023822, complete gene.| tag = OJ1458_...")
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Gene Name

BGIOSGA023822

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023822, complete gene.

LocusTag

OJ1458_B07.103

Ensembl Transcript ID

BGIOSGA023822-TA

Ensembl Protein ID

BGIOSGA023822-PA

Length

5691

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24883700..24889390

Sequence Coding Region

24888916..24889390,24887026..24888232,24886122..24886447,24885851..24886035,24885588..24885758
,24884805..24885005,24884253..24884504,24883700..24884158

Genome Context

<gbrowseImage1> name=IndicaChromosome07:24883700..24889390 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:24883700..24889390 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTGCAGCTTAACCTTACCACCTCCGACCACAAATATAAAGGATCGAATTATACTGGCTATACATATTGGGCCGGACTACATGGGCCTCCTGCAGTCGTTTCCTTTTGGGCCCAAACACTAGCACCCCAAGCGCTTCTCGCGAACTGCCGCGGCGGCGGCGGCCGAGGCGACCAGCGGCGAGCCGGCGAGGAGCAACTCGTGGAAGCGCCGATGATCTCCCTTCTCTGTGGAGAGCAAGAAGCAGAGACGATTTGGGTGTGTATCGCCCCTGGACAGGCAAAAGGCAGGGGTTCCTCCTCTGTTGCCTTCATCAGGACCTGGCAAGTTTGGCAAGTGACATTTCTTGGTTTTCTTGTTCAAGAACAGAATCTGTTAAGCTCACCTGAAATCGTGCTCAGTTGGTTCGGCAATATGCAGATTATGCAGATGCACGTGCGCCTCCTGGAATGGAGGTTTGGTCGAGAGCAAGCGAGATATGCCGTCGCCTGCGGGGGGTCCGGTGGCCGTGGCGGCGGCGTCTGCGGCGGCGGCGCCGGCGCTGGGGATCTCGCCGGATATGTACCCGACGGAGGACGACCTGGCGTACGAGAGGAGATCCTGCGCGAGCCGTTCAAGCTCAAGGGGTGGTGGCGCTACCTCGTCGCCCGCGCCGCCGCGCCGTTCGCCAAGCGCGCCGTCATCTACGAGCGCGCGCTCAAGGCGCTCCCGGGGAGCTACAAGCTGTGGCACGCCTACCTCCGCGAGCGCCTCGACCACGCCCGCCCGCACCCCATCTCCCACCACGCTTACGCCTCCCTCAACAACACCTTCGAGCGCGCCCTCGCCACCATGCACAAGATGCCCCGCGTCTGGGTGCTCTACCTCACCTCGCTGCTCGACCAGCGCCTGCTCACGCGCGCGCGCCGCGCCTTCGACCGCGCGCTGCGCGCGCTCCCCGTCACGCAGCACGACCGCATCTGGCCACTCTACCTCCGCCTCGCCTCGCTCCCGGCCTGCCCCGTCGAGACCTCGCTCCGCGTCTTCCGCCGATACCTCCAGTACGACCCCTCCCACGCCGAGGACTTCATCGATTTCCTCATCTCGGCAAACCGCTGGCAGGAGGCCGCCGACCGCCTCGCGGCCGTGCTCAACGATGATGGCTTCCGCTCCGTCAAGGGTAAGACCCGGCACCAGCTCTGGCTCGAGCTATGCGAAATCCTCACCAAGCATGCCGATGAGGTTGCGGGGCTCAAGGTGGACGCTATACTGCGGGGCGGCATACGCAAGTTCACCGATGAGGTTGGCAAGCTGTGGACCTCCCTGGCCGATTACTATGTCAGAAGAACCTTGTATGAGAAGGCGAGGGATGTCTTCGAGGAGGGGGTTGCTTCGGTGATGACGGTGCAGGAGTTCAGCGTGGTGTTTGAGGCGTACACACAATTCGAGCAGAGTATGCTTGCGGCGAAGCTGGAGGCAGCCGAGGAGGAGGGTGCAGGGAGTGAAGGGGAAGAGGAAGCGGGCAGGAAGAATGGGATGGACAAGCTGTCGAAGAAATTCCTCGCAGATTGCTGGCTGAATGATGAGGATGATACTGATTTGAGGCTGGCAAGGTTTGAGCGGCTGTTGGATCGCCGGCCAGAGCTCCTCAGCAGTGTCCTGTTGCGACAGAATCCACATAATGTGGAGGAATGGCACAGGAGGGTGAAACTTTTTGAGAAGGATCCTACAAGGCAAGTAGCCACATATGTTGAAGCTGTGAAAACCGTAGACCCTATGAAGGCAGCTGGAAAACCACATACTCTATGGGTGGCATTCGCAAAGATGTATGAGAAACATAATCGTCTAGATAGTGCTGAAGAGATCTTTAAAAAAGCAACACAGGTGAACTACAAGGCAGTTGACCACTTAGCCAGTATTTGGTGTGAATGGGCAGAGATGGAGCTGAGGCACAATAATTTTGACAAGGCTATTGAGCTGATGAGGCAAGCTACTGCAGAACCCTCTGTTGAGGTTAAGAGGCGAGCTGCTGCTGAGGGGGATGAACCTGTCCAATTGAAAGTACATAAATCTCTGAAACTGTGGAGCTTCTATGTGGACCTGGAGGAAAGTCTTGGAACATTGGAATCAACTCGTGCAGTTTATGAGAGAATATTGGATTTACGAATTGCCACTCCCCAAATAGTTCTCAATTATGCATATCTTCTTGAGGAAAACAAGTATTTTGAAGATGCGTTTAAAGTGTATGAGCGTGGTGTGAAAATTTTTAAATATCCCCATGTTAAAGACATTTGGGTGACCTACCTCACAAAGTTTGTAAGAAGGTATCAGAGAAGCAAGTTAGAGCGGGCAAGAGAACTGTTCGATGAAGCTGTCAAACAGGCTCCTCCACAAGAAAAGAAGGTGTTGTATTTGCAGTATGCTAAGCTGGAGGAAGACTATGGCCTTGCAAAACGTGCAATGAATGTATACGATGAAGCTGTAAGGGCTGTTCCTAACAGCGAAAAGATGAGTATGTACGAAATATATATTGCACGGGCTGCGGAGCTATTTGGTGTTCCAAGAACAAGACAGATATATGAGCAAGCAATTGAATCTGGACTCCCAGACAGAGATGTCATGACAATGTGCATGAAATTTGCAGAACTTGAAAGAAACCTTGGAGAAATTGATCGTGCCCGTGCCATTTATGTCCACGCATCCAACTATGCCGATCCAAACTCTCATCCTGAATTTTGGAATAAATGGAATGAATTTGAGATTCAGCATGGTAACGAAGATACATTCAGGGAGATGCTTCGCATCAAGCGTACTGTGGCTGCTAGCCGCAGTCAGACTCATTTCATACTCCCGGAGTACTTGATGCAGAGGGACCAGAGGCTGAACCTCGATGAGGCAGTTGACACTCTGAAACGAGCCGGTGTTCCTGAGGATGAGATGGCTAACCTAGAAAGGCAACTAGCGCCAGGACCTTCCACGGCTCCACCAGTTCCAAGCACTGCTACTGCTCCTGCTAACCGGATGATGAACTTTGTCAGTGCTGGAGTGCAGGCACAGGCTGAGAGCAGCAGCAGGCAACAACAGGCTGCTGCTGCTAACAATGAGGACATTGAGCTGCCCGATGAGAGCGACGAGGAGGAAGACGATGTCCAAATTGCGGAGAAGAGTGTTCCTGCTGCGGTGTTTGGAGAGCTCGGCAAGAGAGCTGCAGAGAACAGGGAGGAGGAAAGCTCTGGTGCCCAGGAGAATGAGCAGCTTGGCGCCCTTGAGAGGATCAAGCGAAGGCGTCAATGA</cdnaseq>

Protein Sequence

<aaseq>MAVQLNLTTSDHKYKGSNYTGYTYWAGLHGPPAVVSFWAQTLAPQALLANCRGGGGRGDQRRAGEEQLVEAPMISLLCGEQEAETIWVCIAPGQAKGRGSSSVAFIRTWQVWQVTFLGFLVQEQNLLSSPEIVLSWFGNMQIMQMHVRLLEWRFGREQARYAVACGGSGGRGGGVCGGGAGAGDLAGYVPDGGRPGVREEILREPFKLKGWWRYLVARAAAPFAKRAVIYERALKALPGSYKLWHAYLRERLDHARPHPISHHAYASLNNTFERALATMHKMPRVWVLYLTSLLDQRLLTRARRAFDRALRALPVTQHDRIWPLYLRLASLPACPVETSLRVFRRYLQYDPSHAEDFIDFLISANRWQEAADRLAAVLNDDGFRSVKGKTRHQLWLELCEILTKHADEVAGLKVDAILRGGIRKFTDEVGKLWTSLADYYVRRTLYEKARDVFEEGVASVMTVQEFSVVFEAYTQFEQSMLAAKLEAAEEEGAGSEGEEEAGRKNGMDKLSKKFLADCWLNDEDDTDLRLARFERLLDRRPELLSSVLLRQNPHNVEEWHRRVKLFEKDPTRQVATYVEAVKTVDPMKAAGKPHTLWVAFAKMYEKHNRLDSAEEIFKKATQVNYKAVDHLASIWCEWAEMELRHNNFDKAIELMRQATAEPSVEVKRRAAAEGDEPVQLKVHKSLKLWSFYVDLEESLGTLESTRAVYERILDLRIATPQIVLNYAYLLEENKYFEDAFKVYERGVKIFKYPHVKDIWVTYLTKFVRRYQRSKLERARELFDEAVKQAPPQEKKVLYLQYAKLEEDYGLAKRAMNVYDEAVRAVPNSEKMSMYEIYIARAAELFGVPRTRQIYEQAIESGLPDRDVMTMCMKFAELERNLGEIDRARAIYVHASNYADPNSHPEFWNKWNEFEIQHGNEDTFREMLRIKRTVAASRSQTHFILPEYLMQRDQRLNLDEAVDTLKRAGVPEDEMANLERQLAPGPSTAPPVPSTATAPANRMMNFVSAGVQAQAESSSRQQQAAAANNEDIELPDESDEEEDDVQIAEKSVPAAVFGELGKRAAENREEESSGAQENEQLGALERIKRRRQ</aaseq>

Gene Sequence

<dnaseqindica>1..475#1159..2365#2944..3269#3356..3540#3633..3803#4386..4586#4887..5138#5233..5691#ATGGCGGTGCAGCTTAACCTTACCACCTCCGACCACAAATATAAAGGATCGAATTATACTGGCTATACATATTGGGCCGGACTACATGGGCCTCCTGCAGTCGTTTCCTTTTGGGCCCAAACACTAGCACCCCAAGCGCTTCTCGCGAACTGCCGCGGCGGCGGCGGCCGAGGCGACCAGCGGCGAGCCGGCGAGGAGCAACTCGTGGAAGCGCCGATGATCTCCCTTCTCTGTGGAGAGCAAGAAGCAGAGACGATTTGGGTGTGTATCGCCCCTGGACAGGCAAAAGGCAGGGGTTCCTCCTCTGTTGCCTTCATCAGGACCTGGCAAGTTTGGCAAGTGACATTTCTTGGTTTTCTTGTTCAAGAACAGAATCTGTTAAGCTCACCTGAAATCGTGCTCAGTTGGTTCGGCAATATGCAGATTATGCAGATGCACGTGCGCCTCCTGGAATGGAGGTTTGGTCGAGAGCAAGGTGAAAGCACAAAAGTGATGTGAGCTCTCTGAATTCTGATAGACTCCTGGAATGGAGGTTTGGTCAGGAGCAAGGTGAAAAGCACAAGAATGATGTGAGCTCTCTGAATCTGATAGACGCTTTCCATTGATTTTGTTGGTCATCGTCAATCATATAGTTTTTCATATTATTGATTAAATGATCTGGACTTACGACTTACGAGCTAATGGCTCCTTTTTTTTCCCATAGATGAATCAAGAAGTGAATACAAGCATATAACCAATGAGTATTTAGATGATTCCTTAGGTTCTAATCGAACATTTAATTTATCTTTTCATTTGAAGTCTTAGTACATAAAGACTACAAATAGGAACAACTTATTTGGACAAGTTTAAATGTGAAATAGGTATAACTTTTATGGATGGATAGCGTAATACCCAAATCGGGAACAAAAATATTTGAGTAGCAGAAGCAGATGAGTAACGCTTGGGCTCTGGTGCAGACAAAACCGGCCCAATTCCTCCGTAAAAAAGTTCAGCCCAAAATCCCTGAAGGCCCACCAAAACCACTCAAGCCCTTGCCTACTCGGGTTCCAACTCATCGGCCCAACAAAACGACGCGTCGGCCTCGTCGAGCCGAGTCGATCTCTTTCTCTCTCTCTCCGGCGCAAATCCTCCTCGCCGCGGCGGAGCACTAAACCCTAGCGAGATATGCCGTCGCCTGCGGGGGGTCCGGTGGCCGTGGCGGCGGCGTCTGCGGCGGCGGCGCCGGCGCTGGGGATCTCGCCGGATATGTACCCGACGGAGGACGACCTGGCGTACGAGAGGAGATCCTGCGCGAGCCGTTCAAGCTCAAGGGGTGGTGGCGCTACCTCGTCGCCCGCGCCGCCGCGCCGTTCGCCAAGCGCGCCGTCATCTACGAGCGCGCGCTCAAGGCGCTCCCGGGGAGCTACAAGCTGTGGCACGCCTACCTCCGCGAGCGCCTCGACCACGCCCGCCCGCACCCCATCTCCCACCACGCTTACGCCTCCCTCAACAACACCTTCGAGCGCGCCCTCGCCACCATGCACAAGATGCCCCGCGTCTGGGTGCTCTACCTCACCTCGCTGCTCGACCAGCGCCTGCTCACGCGCGCGCGCCGCGCCTTCGACCGCGCGCTGCGCGCGCTCCCCGTCACGCAGCACGACCGCATCTGGCCACTCTACCTCCGCCTCGCCTCGCTCCCGGCCTGCCCCGTCGAGACCTCGCTCCGCGTCTTCCGCCGATACCTCCAGTACGACCCCTCCCACGCCGAGGACTTCATCGATTTCCTCATCTCGGCAAACCGCTGGCAGGAGGCCGCCGACCGCCTCGCGGCCGTGCTCAACGATGATGGCTTCCGCTCCGTCAAGGGTAAGACCCGGCACCAGCTCTGGCTCGAGCTATGCGAAATCCTCACCAAGCATGCCGATGAGGTTGCGGGGCTCAAGGTGGACGCTATACTGCGGGGCGGCATACGCAAGTTCACCGATGAGGTTGGCAAGCTGTGGACCTCCCTGGCCGATTACTATGTCAGAAGAACCTTGTATGAGAAGGCGAGGGATGTCTTCGAGGAGGGGGTTGCTTCGGTGATGACGGTGCAGGAGTTCAGCGTGGTGTTTGAGGCGTACACACAATTCGAGCAGAGTATGCTTGCGGCGAAGCTGGAGGCAGCCGAGGAGGAGGGTGCAGGGAGTGAAGGGGAAGAGGAAGCGGGCAGGAAGAATGGGATGGACAAGCTGTCGAAGAAATTCCTCGCAGATTGCTGGCTGAATGATGAGGATGATACTGATTTGAGGCTGGCAAGGTTTGAGCGGCTGTTGGATCGCCGGCCAGAGCTCCTCAGCAGTGTCCTGTTGCGACAGAATCCACATAATGTGGAGGAATGGCACAGGTGAGACTCACTTGATTGATCACATTGATTTATTCTTTCATGTGTTTTGACTATAGTAAACACTAATTTGCTTTTTAGTTCACTTCATATACATGCTGTTTATTTTTTCAACATCAACATCTTAACTTAGTAGCATCTCAATATTCCAGCCTAGTAGAGCAATTTTGATTTGGATAATTCATGTTAAACCAGCAAACCAAATGTACTGTTATTGCAAAAAGTTTGGTCCCTTCTAATATTTTAGGTGATATTAAATGACTAATGCAAGACCCCACTGGACTATTACATATGATTGTAAGTATACGGTCTATGTATTTTACTGTTTTATTGTAGTTGCAATTTACTGTTTTTGTAGTACATATTTCTTTCCAGCGAGAAGTTTTGGATTCTTTACTTTAGTGCAGTAAGTTGCTGTGGTAAATTTTAATTCAAAACATGTATACTGTGGAATGTATCAATCTAGTGGCAGGTGTTTTCATTTCTCAGCCTAGAAATGTACTAGTATATTGGCAGTTCCCTTTTGTGTTTTCCATTCTCATACTTGATGGAATTGGCTAACAATACGATTATGTTTGCAGGAGGGTGAAACTTTTTGAGAAGGATCCTACAAGGCAAGTAGCCACATATGTTGAAGCTGTGAAAACCGTAGACCCTATGAAGGCAGCTGGAAAACCACATACTCTATGGGTGGCATTCGCAAAGATGTATGAGAAACATAATCGTCTAGATAGTGCTGAAGAGATCTTTAAAAAAGCAACACAGGTGAACTACAAGGCAGTTGACCACTTAGCCAGTATTTGGTGTGAATGGGCAGAGATGGAGCTGAGGCACAATAATTTTGACAAGGCTATTGAGCTGATGAGGCAAGCTACTGCAGAACCCTCTGTTGAGGTTAAGAGGCGAGGTATATATATATTTTTACCATCTTAATTTTTGTTGTGTGTTTTACTGTTCATATTTTCTAACAGTAATGCAATATGTCCTGTGCAGCTGCTGCTGAGGGGGATGAACCTGTCCAATTGAAAGTACATAAATCTCTGAAACTGTGGAGCTTCTATGTGGACCTGGAGGAAAGTCTTGGAACATTGGAATCAACTCGTGCAGTTTATGAGAGAATATTGGATTTACGAATTGCCACTCCCCAAATAGTTCTCAATTATGCATATCTTCTTGAGGTAGGATTATTTGTTAACTCCGCATTTCCAAAATTCGAGTAAACTATTTTATCGTGCATATGCTAATATCACGACATTTCCTCTTTCCACAGGAAAACAAGTATTTTGAAGATGCGTTTAAAGTGTATGAGCGTGGTGTGAAAATTTTTAAATATCCCCATGTTAAAGACATTTGGGTGACCTACCTCACAAAGTTTGTAAGAAGGTATCAGAGAAGCAAGTTAGAGCGGGCAAGAGAACTGTTCGATGAAGCTGTCAAACAGGTAACTAGAATTTTACCCACATGTTTCTTACATATAGTTGTATGCAATGCTTGCATGTAAGCAATATTTGTGGCATGCTGCTGTAGTCACAAAAGAGTAACAGTTTGGATAGAGACACCATCTCCACAACACACTAAATTTGTAAAATCATGAAAGTAGTTATGAATATATCTACATTTAACTTTTGAAACACTGAATGCATGTGTCCCTAAATACTGTTCTTTTTCACTGGATAAAATGTGCTAAGTTGAATCATGTTTAATCTAGTTGGAGTTGGGACTTGTTTTAGTTAACATGTTACCAAATGCTTTTTGGGTATAACTGGCAATCAGAAATTTTGTCCTTGCTTCATACGAATAAGTTCAGGGCGATTCTTGTTGCACCTGTTTTCTTCTTCCTTTAAGAACCTTGTCTCTGCTTGCTGATATCATGTCGTGATATTTTGCATTTGCTTGCTTGCTTGTTTAGACTCCAAACCTTTGGTTGATTATTTCATGTTCCTTTTTCCTGCATCGATGCTGGTTTGAAAATGATGTTTTTCCTATATTGCTTCAGTACTTACATTTTGTTTTGTTTGATCAGGCTCCTCCACAAGAAAAGAAGGTGTTGTATTTGCAGTATGCTAAGCTGGAGGAAGACTATGGCCTTGCAAAACGTGCAATGAATGTATACGATGAAGCTGTAAGGGCTGTTCCTAACAGCGAAAAGATGAGTATGTACGAAATATATATTGCACGGGCTGCGGAGCTATTTGGTGTTCCAAGAACAAGACAGATATATGAGGTGAGTGTGTTATCTTGGTTCTTACTTGATATACTGGTTATATCATGTGCTTGTTTTGAGATCCAGTTTTACGTTTTGCTGTTTTAAGACAAAATTAATGTGGGATTTATTACATTCCAACAGCCTTGCCTCTTTTTCTTTTTATTTTTTTTTTTGCTAACTGTTCGTATGAATCAAACAACCTGCTTATGAAAAATCCAGATACTATTTTTCTGTATAGTATGTTCTAGATTTTAGTTGAGTCACACTTTAGGTATGCACAACTGTAAATGATTCTAACTTTATTCCTTTGTGCTGCAGCAAGCAATTGAATCTGGACTCCCAGACAGAGATGTCATGACAATGTGCATGAAATTTGCAGAACTTGAAAGAAACCTTGGAGAAATTGATCGTGCCCGTGCCATTTATGTCCACGCATCCAACTATGCCGATCCAAACTCTCATCCTGAATTTTGGAATAAATGGAATGAATTTGAGATTCAGCATGGTAACGAAGATACATTCAGGGAGATGCTTCGCATCAAGCGTACTGTGGCTGCTAGCCGCAGTCAGGTATGTCGGGTCAACCTTATAGGCAGTTTGGTATTATCAATGATCATCTTGTGAGTTAATAAACTAATAATGATGTATTTCGTGTCATGTGCAGACTCATTTCATACTCCCGGAGTACTTGATGCAGAGGGACCAGAGGCTGAACCTCGATGAGGCAGTTGACACTCTGAAACGAGCCGGTGTTCCTGAGGATGAGATGGCTAACCTAGAAAGGCAACTAGCGCCAGGACCTTCCACGGCTCCACCAGTTCCAAGCACTGCTACTGCTCCTGCTAACCGGATGATGAACTTTGTCAGTGCTGGAGTGCAGGCACAGGCTGAGAGCAGCAGCAGGCAACAACAGGCTGCTGCTGCTAACAATGAGGACATTGAGCTGCCCGATGAGAGCGACGAGGAGGAAGACGATGTCCAAATTGCGGAGAAGAGTGTTCCTGCTGCGGTGTTTGGAGAGCTCGGCAAGAGAGCTGCAGAGAACAGGGAGGAGGAAAGCTCTGGTGCCCAGGAGAATGAGCAGCTTGGCGCCCTTGAGAGGATCAAGCGAAGGCGTCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023822