BGIOSGA023854

From RiceWiki
Revision as of 06:02, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023854| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023854, complete gene.| tag = P0455H1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023854

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023854, complete gene.

LocusTag

P0455H11.110

Ensembl Transcript ID

BGIOSGA023854-TA

Ensembl Protein ID

BGIOSGA023854-PA

Length

1659

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24357642..24359300

Sequence Coding Region

24359160..24359300,24358822..24359060,24358525..24358720,24358060..24358437,24357881..24357967
,24357642..24357767

Genome Context

<gbrowseImage1> name=IndicaChromosome07:24357642..24359300 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:24357642..24359300 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTTGAAGGGTGGTAGTACAATGGAAGCACAATTTTGTGATTCTAAGAATTTCTCTAACCGACAACCAAATCATTCTGGAAAGATCAAGCTTGAATTATTCCCGATAGATAAGGCAATTCAAAAGGTTCTGCAGCAGGAAAACCGCAATCCTTACCTGGAATTGACTTTAGCTCCACGAAAGAAGATATCTTCAGTTGTGCAGCATCTGAACATAAAATGGGGCAATTCTCAGTGTGCAAGAGGCGAACTCATGCTCTTTCCTTATGATGCTCAACTGGATAACATAGCTGGCAGTGGAAAATGGACTCATAGTGATTCTTGCACGGCTGCTGATGTGCATGCTGCAGTTGGCAGCCCTTTGAGATTTCGATTAAGATATGGTTGGTTTGAACCTGATTTTGAGCAACAAAGCCATGAACCAAATTTACAAGATGTGCACTCTGTAGACAAGATCATTGACAACAAGCCTCTGGATCCTGTTCTCATGGAACAGAAACAAACGATTCATTTGAGTGAGTTCCCGAATGACTTTGCTGCGCAGTCTGTTGGGGACAATGCAGTACAGACTGTGGGTAATCAAAGCAAAGTAACGCCGCTTTCATGGATTGATTGCATATCTAATATAAGCTTTGAAGAATTGTTATCTGAAGCTGCACCTTCTGCAGACAACAAGCAATTGCTTTCTCAAAATAATACGAGTTTCTCACAGATCCCTATTAATTTCGATTCATTTGACGCTGCTATTGCTTCTGTGATTGGTCAGCAACAAGCAAGTAACCAAATGAAGGTGTCAAACCCATCCCTTTGGGATGCTGAAGAAGCTTGTCATGCATTTCCTTTGCAGAGTCAAACTTCAATCAGGACATTTGGTTCAGGTCCTAACCATAGTGGTGCTATTACCTCATCCATCCTTGGCACAATTCCAGAATGTGTCACAGATGTTGACCAGCAATGCTTTACTGAAGTTTGGGAAGAGGAACCAAGCCCTCATATACCACTTTCGTGTAAGGACAATGTGGCACCATACATATCACTGCCTGAATTTGGTGAGCCAGAGCTTGGAGCGTATTGCTCTAGACTTTTGAGTGGTACAGACAGTTTAGGGCTAAGTGGTTTACTGTCAAACAGCTTGGATGCATTCCAGAAATTCTCTGTTTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MALKGGSTMEAQFCDSKNFSNRQPNHSGKIKLELFPIDKAIQKVLQQENRNPYLELTLAPRKKISSVVQHLNIKWGNSQCARGELMLFPYDAQLDNIAGSGKWTHSDSCTAADVHAAVGSPLRFRLRYGWFEPDFEQQSHEPNLQDVHSVDKIIDNKPLDPVLMEQKQTIHLSEFPNDFAAQSVGDNAVQTVGNQSKVTPLSWIDCISNISFEELLSEAAPSADNKQLLSQNNTSFSQIPINFDSFDAAIASVIGQQQASNQMKVSNPSLWDAEEACHAFPLQSQTSIRTFGSGPNHSGAITSSILGTIPECVTDVDQQCFTEVWEEEPSPHIPLSCKDNVAPYISLPEFGEPELGAYCSRLLSGTDSLGLSGLLSNSLDAFQKFSVF</aaseq>

Gene Sequence

<dnaseqindica>1..141#241..479#581..776#864..1241#1334..1420#1534..1659#ATGGCGTTGAAGGGTGGTAGTACAATGGAAGCACAATTTTGTGATTCTAAGAATTTCTCTAACCGACAACCAAATCATTCTGGAAAGATCAAGCTTGAATTATTCCCGATAGATAAGGCAATTCAAAAGGTTCTGCAGCAGGTGAGCACCTATGCTTTTGCAAGAGTTTCATATATTTGTTAAATACAATCTTCTTCAGGTTTCATAGTATGTGTCTTTTTGCTCCATATAATGTGGCAGGAAAACCGCAATCCTTACCTGGAATTGACTTTAGCTCCACGAAAGAAGATATCTTCAGTTGTGCAGCATCTGAACATAAAATGGGGCAATTCTCAGTGTGCAAGAGGCGAACTCATGCTCTTTCCTTATGATGCTCAACTGGATAACATAGCTGGCAGTGGAAAATGGACTCATAGTGATTCTTGCACGGCTGCTGATGTGCATGCTGCAGTTGGCAGCCCTTTGAGATTTCGATTAAGGTTCAGTTTCCTTTTTCCCCAGATATGGTTACTTCTTTTTGCATCCATGCATGCTGTATACAGATCTTATGGCTAAAAAATGCTCTTTCTTGTTTATTAAGATATGGTTGGTTTGAACCTGATTTTGAGCAACAAAGCCATGAACCAAATTTACAAGATGTGCACTCTGTAGACAAGATCATTGACAACAAGCCTCTGGATCCTGTTCTCATGGAACAGAAACAAACGATTCATTTGAGTGAGTTCCCGAATGACTTTGCTGCGCAGTCTGTTGGGGACAATGCAGTACAGACTGTGGTGAGTATTAGGAGTTTTTTTTTTCCCAGCATCACCAATGGTATTTTCACTTGCGACCTGACATTCTTCACATGCTTTCTGAAACAGGGTAATCAAAGCAAAGTAACGCCGCTTTCATGGATTGATTGCATATCTAATATAAGCTTTGAAGAATTGTTATCTGAAGCTGCACCTTCTGCAGACAACAAGCAATTGCTTTCTCAAAATAATACGAGTTTCTCACAGATCCCTATTAATTTCGATTCATTTGACGCTGCTATTGCTTCTGTGATTGGTCAGCAACAAGCAAGTAACCAAATGAAGGTGTCAAACCCATCCCTTTGGGATGCTGAAGAAGCTTGTCATGCATTTCCTTTGCAGAGTCAAACTTCAATCAGGACATTTGGTTCAGGTCCTAACCATAGTGGTGCTATTACCTCATCCATCCTTGGCACAATTCCAGAATGTGTCACAGATGTTGACCAGGTACCTCCCTAGCTGTTATTTATTTGCTCTAATTTCCTTTCTTGCCAAATATACTATGCGAATATACAATGCTTAACCGCTTGTCTCTGCAGCAATGCTTTACTGAAGTTTGGGAAGAGGAACCAAGCCCTCATATACCACTTTCGTGTAAGGACAATGTGGCACCATACATATCACTGGTATTCACTAGGGCCTTTCACAAATTTTTTGATGTATTAATTTAAGATGCTGTTTTTCCTCGATCTTCGGAAGATGATCTGATTCTTGTCTATCTTCATCTGTTTGCTTTCAGCCTGAATTTGGTGAGCCAGAGCTTGGAGCGTATTGCTCTAGACTTTTGAGTGGTACAGACAGTTTAGGGCTAAGTGGTTTACTGTCAAACAGCTTGGATGCATTCCAGAAATTCTCTGTTTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023854