BGIOSGA023873

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Revision as of 06:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023873| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023873, complete gene.| tag = P0506F0...")
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Gene Name

BGIOSGA023873

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023873, complete gene.

LocusTag

P0506F02.114

Ensembl Transcript ID

BGIOSGA023873-TA

Ensembl Protein ID

BGIOSGA023873-PA

Length

4692

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24080426..24085117

Sequence Coding Region

24085076..24085117,24084282..24084311,24083939..24083992,24083266..24083442,24082929..24083000
,24082790..24082849,24081910..24082019,24080994..24081293,24080706..24080897
,24080571..24080622,24080426..24080476

Genome Context

<gbrowseImage1> name=IndicaChromosome07:24080426..24085117 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:24080426..24085117 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCGTCATGCAGAAGATCAAGGACATCGAGGACGAGTGGTCTTTTGTCAAAGGCTGCATACTGCAGATGGCAAGGACGCAGAAGAACAAGGCCACTGCACACCATCTTGGTCTTCTGAAGGCTAAACTTGCAAAATTACGCCGTGAGTTGCTGACTCCTACATCCAAAGGTGGTGGTGGCGGTGCTGGCGAGGGATTTGATGTGACAAAAAGTGGAGATGCACGTGTTGGTTTGGTGGGCTTTCCTTCAGTTGGAAAATCAACATTGTTGAACAAGCTGACAGGAACATTTTCAGAGGTTGCAGCCTACGAATTCACAACTTTAACATGTATTCCTGGAGTTATAATGTACAAAGGGGCTAAAATCCAGCTTTTAGATCTTCCAGGAATCATTGAGGGTGCTAAAGATGGAAAGGGTAGAGGAAGGCAGGTTATCAGCACAGCAAGGACATGCAATGTCATTCTGATTGTTCTTGATGCCATTAAGCCAATAACCCACAAGCGGCTTATTGAGAAGGAGCTTGAGGGATTTGGCATTAGGTTGAACAAGACACCCCCCAATTTGACATTTAGAAGAAAGGACAAGGGTGGCATCAATTTTACATCAACTGTGACGAACACAAACTTGGATCTTGAAACAGTAAAAGCAATCTGCAGTGAGTACAGGATACACAATGCTGATGTCTCCCTTAGATATGATGCAACAGCAGATGATCTCATAGATGTGATTGAGGGAAGCAGAATTTACATGCCTTGCATCTATGTTGTTAATAAGATTGATCAGATAACACTTGAAGAGCTGGAAATCTTGGATAAACTTCCCCACTACTGCCCAATTAGTGCTCATCTTGAGTGGAATCTCGATGGTCTTCTAGAGATGATCTGGGAATACCTGGATTTGGTTAGGATATACACAAAACCGAAAGGTTTAAACCCAGATTATGAGGACCCTGTAATCGTATCCTCTAAGAAGAAAACAGTGGAAGACTTCTGCAACAGAATCCACAAGGACATGGTGAAACAATTTAAATATGCATTGGTGTGGGGTTCTAGCGTGAAGCATAAGCCTCAGAGAGTTGGCAAGGAACATGAGCTTGAGGATGAGGACGTTGTCCAGATCATCAAGAAAGTTTAG</cdnaseq>

Protein Sequence

<aaseq>MATVMQKIKDIEDEWSFVKGCILQMARTQKNKATAHHLGLLKAKLAKLRRELLTPTSKGGGGGAGEGFDVTKSGDARVGLVGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCIPGVIMYKGAKIQLLDLPGIIEGAKDGKGRGRQVISTARTCNVILIVLDAIKPITHKRLIEKELEGFGIRLNKTPPNLTFRRKDKGGINFTSTVTNTNLDLETVKAICSEYRIHNADVSLRYDATADDLIDVIEGSRIYMPCIYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEMIWEYLDLVRIYTKPKGLNPDYEDPVIVSSKKKTVEDFCNRIHKDMVKQFKYALVWGSSVKHKPQRVGKEHELEDEDVVQIIKKV</aaseq>

Gene Sequence

<dnaseqindica>1..42#807..836#1126..1179#1676..1852#2118..2189#2269..2328#3099..3208#3825..4124#4221..4412#4496..4547#4642..4692#ATGGCGACCGTCATGCAGAAGATCAAGGACATCGAGGACGAGGTAACGAGCTCCCCTTCTAGGGCCGGCGTGCGCCGCCCCGCCGCCCTCCGACGATCCGTAGCTGTCGCGGATAGATTTGCTGCTCTCGAGGGTAGTAGTGGTTGGGGTTGCGGTTTTGGTTGCTTCGTCTCGAGCTGAATTGGTTTGATGCTGCTTTGTGATGGCGTGATGTGTGCTAGTTTTGGTGGTTTGGACGGTAGATTAGGTCAGGGAAGCTATGGCTCGTGGGTTGGAAGCAGCATGTCATGATTTTTTTTTTAGTATTAGTTCAGAACTGTTAGGTTTTAACTGCGAGCGGCATGCGATGTAGTGGGCTTGTGGCTTTGAGCTGCTCTAATTCAATGAAATGTTACTGTTCATACACTTGTGCTTGGTGAAGGTCGGAGATAAGTTAGACTTGGGGCAGCATTCCAGTCTCGAGGCTGGGCTAATATCATTTTCTTACCTAGTTTATATTCATATGGTTTTGGGATTTTTTTTGTCTTATTATTGGTTGTAATTTGGAGTATTGCTGGATCTAATAGACACATTTTGAGGGTATTAGTGATTTGAAATGTTGGAGGTTGTTGTGTCGTCAATTTGAATATGATGGTGGAACCCTGTATATCTGTTTCTTCATTAGTTATGATTGAGAATTCAGAGATTCTGTAACTGTTGTTGGAATGTAGCTAGGACTAGGGTATTGAATGTTTTGTGTGGTCAATAATGGTAAGAGTACGGGAAATCGATGATATTTCATGAGTCATTTTTCTGTTGTGATTCAGTGGTCTTTTGTCAAAGGCTGCATACTGCAGGTGCAAGTGCATAGATTGCTTTAGTTGCATCTTGCATTTGCATGGTGATGATTTAGTACCATAGTACCTTTCTAGTTATACATATAGTTGTTATCTTGGTTCATAATTAGCAACAGTAACATTTTTTTTATCATGAGCAACACTACCATAACTGTTATGCCATTTGAGAAACCGAGAATTGAATAACTGGAAAAATGGATAGGAACATGTCTAATAGTAAACGAAACAGCTGATGCTTCCACTTTCTAATCCCTTTGCTGATGTTCGTGGCTTTTCTTTGACTTGATAGATGGCAAGGACGCAGAAGAACAAGGCCACTGCACACCATCTTGGTCTTCTGAAGGTAATGTGAACTCCATCCATCTTTAATTTAAAATGCTAGTAGTATGTCTGCTGTTGTATTAAAATCCTAAGAAATTGGCCCATGGGCAGATTAGCTATTTCCGGTTCACAATAAGTTATGCCTTCATGCTTCTGAGTATATCTTGCCTACTTCATGATCAAACGTATGCATCTGCTGAATTCCGTTAGTTCAATTAAATCAGTAGCATGGTTATCTTACCTTTCCCTGCGCATGAACCTTAGTATAAAACTGCTGTATGAGGTTCTATTCCATTCCACAATAATATGTGTCACTTTGGTAAGAGTTTGCATTTAAGGTAAAAAGTGCTTGAAAGGATGGTCATAAGTTCCATCCTCAGGACCTAGACAAATTATTTCATTGTTCTCTGTGTTAATTTCACATATTCTTGCTACTAGAACCTGTGTACTTTTTGTTTAGTTTAATCTGCCACTTCTACGAATTATTGTCTTTTTCCTAACTGTTTTCCTCTTATCAGGCTAAACTTGCAAAATTACGCCGTGAGTTGCTGACTCCTACATCCAAAGGTGGTGGTGGCGGTGCTGGCGAGGGATTTGATGTGACAAAAAGTGGAGATGCACGTGTTGGTTTGGTGGGCTTTCCTTCAGTTGGAAAATCAACATTGTTGAACAAGCTGACAGGAACATTTTCAGAGGTGCTGTACGAATGCTATCTACATATTCATTTACGAGGATCTTCCCCCACTTAGTTGAGCACCCTTTGTATTAGATAAACACACACACACATTTTTATGCCTCTACTGTGTTCGTCTTTTATTCATCAATTTCATGGATATGTTTAAGTAGTTTTCATATTTGGATATTCCAAGTGGCCAAGTCGGTTTTTCCTACAACTATTGCCGAGTTTGTATGCTATAATGGCGTGGTCTTATGAACCTGTCCCTGGTGTTGATTCAACAGGTTGCAGCCTACGAATTCACAACTTTAACATGTATTCCTGGAGTTATAATGTACAAAGGGGCTAAAATCCAGGTAATTATTTACTCTCATAAAGTAAGATACATGCCTGAGTTTATCCACTCTTGGTTGATAACTAGCCTTTCTTTTTCAGCTTTTAGATCTTCCAGGAATCATTGAGGGTGCTAAAGATGGAAAGGGTAGAGGAAGGCAGGTAATATGTCCTGCTCTCACAGTTTTGAATTGGTACTAATGCTATTGGATTTGTATATTCTTTTGCACTGTGTAAACATTTGTTTTTCTGACTCTCTTTGTTTAAAATTGCCATGAGTCATATGGTATATATGAACAATTTATTGTTTGCAAGATTTCTTATGCAACCTTTATAGGAATCACCTGACTACTTCAGCACTTGTCTCTTGTATAAATCATCTAGGCAGCTGCATGTACTCATAGAAGTGCACTGTCACTTCTCATGATAATATTTGTTTAAAAAGAGGGAAATGTGTTCTGTATAATAGTGGCATTTTATCAATTGGTATGTGATTTCCACTTTCTGGTTAACAATGCAGAACTTCCTTAAATGTATATGTGATGGAAATCAGACTAGTTGTTAGATATGCTCTTGAATGTTTTGAAGGCTGAATGAGCTTTTCATCTTGAACATGCAATACTGCAATTTAAGTGAACATTATCTGTACCATGCATGTTGAAGTTATCTAACTTTTGCACGCCTAACAATGTGGCAGCAAGGTTCTATTTATCCTTTTAATTTAATGACACTGTGTTTCACTAAGAAAAAATCAGTATTTTTTTAGGAGACAAGTCTCACATGCTTTAGATATCCTCACATCGAACCCAAGGACTTCTCTCCCTATATCAAATAGTAATATTATATGCAATAATTAAGCATATTTTTGTTGTTTGTCAGGAAGTTATGCTGTTTTCCCTTCTAGTCTGATAGATAGCTTACATGTTTTTCAGGTTATCAGCACAGCAAGGACATGCAATGTCATTCTGATTGTTCTTGATGCCATTAAGCCAATAACCCACAAGCGGCTTATTGAGAAGGAGCTTGAGGGATTTGGCATTAGGTATGTTTTGACTTTCTTTTGGGTAGAAGATGTTTCAGCGGTGTTTGCCATACTATACAAAACTTGCTAAGGGTGCGTTCGGCAGTGAGAGTTCCCAACTTTACTCTCTCGTTTTCAGCGCGCATGTTTCTCGAACTGCTAAACGGTGTGTTATTTGCAAAAGAAAAATATGTAGGAAAGTTGCTATAAAAAATCATATTAATCTATTTTTAAAGCATTTTTAAGCTGAAACTCAATTAATTATGTGCTAATAATCCTTCACTTAGTTTTCCGTGCTGGGAGGCAATGTTGGGAATCTTGCCTCCCGAACTCAAGCCTAAATAGCTTTTGTTTTTTCATTCTTTTCTGCTTGCCTCTGTCACCATGAGCACAAATAGAATCAAACAAATTTATATGACACCATTCATCTTAGTTTTCGTCGGTATGTCATTCATCCAATTTTATGAAGAGTAACTGCGCCTACTGGATCATGGGAAACTCAAGAAGTCAAGATGCTATGTCCACCCTTGCTCACTACAAGTTCATTTCACTCTCAAGAGTTCTTTTAGGCCATGCTATCTTCCCTGCTGAAAGAAGGCTGATGTTTAATCTTCATGAACCCTGTATCAAATGATAGGTTGAACAAGACACCCCCCAATTTGACATTTAGAAGAAAGGACAAGGGTGGCATCAATTTTACATCAACTGTGACGAACACAAACTTGGATCTTGAAACAGTAAAAGCAATCTGCAGTGAGTACAGGATACACAATGCTGATGTCTCCCTTAGATATGATGCAACAGCAGATGATCTCATAGATGTGATTGAGGGAAGCAGAATTTACATGCCTTGCATCTATGTTGTTAATAAGATTGATCAGATAACACTTGAAGAGCTGGAAATCTTGGATAAACTTCCCCACTACTGCCCAATTAGGTGAGAATTTAATTGACATCTTTTGTTGTGCTTTATTCCATTCATTTTGCTCCAACAAGTAAAGCAGACTCTCCCTTTCCTTTTATTTGTCCACAGTGCTCATCTTGAGTGGAATCTCGATGGTCTTCTAGAGATGATCTGGGAATACCTGGATTTGGTTAGGATATACACAAAACCGAAAGGTTTAAACCCAGATTATGAGGACCCTGTAATCGTATCCTCTAAGAAGAAAACAGTGGAAGACTTCTGCAACAGAATCCACAAGGACATGGTGAAACAATTTAAATAGTGAGTATCTTCATTTGTATCTTGTCTGAATATTTTTGTCCCTGTTATCCATCTGTGTGGCTAACTGCTCACAAAACCTGCAGTGCATTGGTGTGGGGTTCTAGCGTGAAGCATAAGCCTCAGAGAGTTGGCAAGGTAGGCATTCTTCAACTACTACCATGTTTCGCTGCCATGATCTATCTTTTTTTAGGGGATATCTCCTAATATTAATTTGGGAGGCTTTGTGCAGGAACATGAGCTTGAGGATGAGGACGTTGTCCAGATCATCAAGAAAGTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023873