BGIOSGA023892

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Revision as of 06:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023892| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023892, complete gene.| tag = OsI_269...")
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Gene Name

BGIOSGA023892

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023892, complete gene.

LocusTag

OsI_26909

Ensembl Transcript ID

BGIOSGA023892-TA

Ensembl Protein ID

BGIOSGA023892-PA

Length

6668

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23741037..23747704

Sequence Coding Region

23747653..23747704,23747416..23747549,23747169..23747209,23744400..23744725,23743749..23743831
,23742878..23742953,23742631..23742695,23742375..23742473,23742109..23742270
,23741037..23741177

Genome Context

<gbrowseImage1> name=IndicaChromosome07:23741037..23747704 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:23741037..23747704 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCAGACGAACGCTGCTGCTTCAAGTGCAAAGCCCATCAGATGCAGAGCGGCGGTGAGCAGGGCGGCCGGGCAGCCGCTGGAGATGGAGGAGGTGGAGGTGGCGCCGCCGCGGGCGCACGAGGTTCGGATCAAGATCATCTGCACCTCGCTCTGCCACACGGACATCACCTTCTGGCGTATGGAAGGCCTTCATCCGTCGATCTTTGGCCATGAAGCAGTCGGCGTGGTGGAGAGCGTGGGGGAGCACGTGCGGGAGGTGGCGGTGGGTGACACGGTGGTGCCGGTGTTCACGGCGCAATGCAGCGAGTGCCCCGACTGCCTCTCCGACCGCAGCAACATCTGCTCCAAGCTACCCGACGTCCACGGCTTCATGCCGCGCGACGGCACGACGCGCTTCTCCTCCGCCTCCACCGGCGAGCCGATTCGCCACTTCCTCTCCGTGTCCAGCTTCGTCCAGTACACGGTCGTCGACGTCAGCCACGTCGTCAAGCTCGACGCCAACTTCCCGCCCGCGATGGCCTGCCTCCTCAGCTGTGGCATCTCCACCGGTGTTGGTGCGGCATGGAAGGTGGCGGCAGTGGAGCCCGGCTCGAGTGTGGCCGTGTTCGGATTAGGCGCCGTGGGGTTAGCGGTTGCTCAAGGAGCGAGGATGCGTGGGGCTACGAGGATTATCGGGGTGGACCTGAACCCGGACAAGTTCGACGTTGGTAAGAGGTTGGGCATCACTGACTTCATCAACCCGAATGATACTGGTGGGAAGACCGTGAGCGAGGTCATCAAGGAGATGACCGGCGGCGGCGGCGCCGACTACTGCTTCGAGTGCATCGGCTCGGCCTCGGTCATGGCGGAAGCCTTCCAAAGCTCTCGAATGGGATGGGGGAAGACGATCCTGCTCGGCGTCATCGGCAGCATGGCGCCGATCGGCATCCCGCCGCAGGACCTCCTCCCGGGAAGATCGGTCATCGGGTCGCTCTTCGGCGGGATCAAGCCCAAGAACGACATCCCGATGCTGGCTCAGAAGTACCTCGACAAGGAGCTGGAGCTGGAGGAGTTCATAACGCACGAGATGGGGTTCGAGGAGATCAACAGGGCGTTCGAGCTGCTCACGCAGGGGAAGAGCATCCGCTGCATCATCTGGATGGACGGCGCCAAGGTGATCGACAACGGCGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MEQTNAAASSAKPIRCRAAVSRAAGQPLEMEEVEVAPPRAHEVRIKIICTSLCHTDITFWRMEGLHPSIFGHEAVGVVESVGEHVREVAVGDTVVPVFTAQCSECPDCLSDRSNICSKLPDVHGFMPRDGTTRFSSASTGEPIRHFLSVSSFVQYTVVDVSHVVKLDANFPPAMACLLSCGISTGVGAAWKVAAVEPGSSVAVFGLGAVGLAVAQGARMRGATRIIGVDLNPDKFDVGKRLGITDFINPNDTGGKTVSEVIKEMTGGGGADYCFECIGSASVMAEAFQSSRMGWGKTILLGVIGSMAPIGIPPQDLLPGRSVIGSLFGGIKPKNDIPMLAQKYLDKELELEEFITHEMGFEEINRAFELLTQGKSIRCIIWMDGAKVIDNGE</aaseq>

Gene Sequence

<dnaseqindica>1..52#156..289#496..536#2980..3305#3874..3956#4752..4827#5010..5074#5232..5330#5435..5596#6528..6668#ATGGAGCAGACGAACGCTGCTGCTTCAAGTGCAAAGCCCATCAGATGCAGAGGTGAGCTAGCTGCCTGCTACAATAGCATCCGATCGAGTTTTGCGATGGCGTCGTTGGCTGATTCTCTGACGAGACGTTCTGCGCCGTCGACGGCGGCGTGCAGCGGCGGTGAGCAGGGCGGCCGGGCAGCCGCTGGAGATGGAGGAGGTGGAGGTGGCGCCGCCGCGGGCGCACGAGGTTCGGATCAAGATCATCTGCACCTCGCTCTGCCACACGGACATCACCTTCTGGCGTATGGTAACCATGAATTCTTCACCTCTTTTCTCCCTTAAATTCAGGTTATTGCTTATAATTAAATTCAGATGTGCTCCGTCTAATTTCGTATTACTTCGCATGGAATTTAGAGACCAAGAACTATTACTTCTCTACTACGGAACATAATAATGATATGATGGGGTTATGTTCTTAATTAACATGAAACTCATGTCTCTACTCGTTTGTAGGAAGGCCTTCATCCGTCGATCTTTGGCCATGAAGCAGTCGGGTAATCAAACAATTTTATTTTTTTTATATTACACGGCAGATGCACACGCACACACCACTACACACACAACACCACAATCATACCCCCATGAATACGTCTTCCTAATACATGTTCTAAGAGACGAAAATCAGCGGTACATCCCTGATCTCACTAAAGTCCTATTAAAAGCCTACTTGCGTGTGCGTAATATTCGTAGTCACCAAAATTTAAATCCTTGGTGGGTAGAGTCATGCACCCACGGCTCTACCACCACAGACCGCTAGTGCTTTCTCAAGTAATCGAACAAATTTATATAGCTCTTATAAACATATAGACATTTCACGTTTCATTTTCCCGGGGGAAATACAGGCACTTCTGTACTGGAGTAGCATTATTCGCCTTTTGTACTATTTGTGCTATTTCTGATGAGTTTGATTCCTGCGCCGGTGTGTTAAACTTGGAGCCTCAGATCAGCAGACAACAGCGTGGCAATTATCAGCAGCATCGGCAGCTAAGGAATATTAGTAATTTTTTTTAAACATCGTTAGTTCAGGAATCATAAAAACCATTCAGACCAGCGAGAGTAAACTAGTTATTTCGATCAGGTTTATCTTTAAAGAAGTGAGGAAGGTATCTCCAGTTATCGTAGAGCAGATAAAATTCGCGAATAAATCCATGGGCTATGAGAAGGTCCCAAAGCTCGTGCTGCAATAATCTTTCCAACCTTGTTTAGGTCCTTGTGCACAAAACACAAATATTAGGGAATGATCTAATATCAAATAAATAGAAGGAATGAGACTTCAAATATAGACTGACTAGCCTATCTCCTTGTAAAGCTAGCCGGAAGATTCATGTGCGTTTGCATGTTCATTTAATCCCAATAAAAGTTTCCCTTCAATTCTTTTGAATAAGTATTGACTGAACGTAAGGTAAGGTGGGTGGGAATAAAGGTAGCTGAGAAAAATGGTGGCATTAATGAACATGTTCTTCTCTACCTTTTGCCTGCCAGGACGTAGCTAGAGGCCGGGTTTAATCTATTGTCTTAAAAATATTCTTTTACGTATCATGTATTTTAGATGAACCGTTCCACTAACCTAATTCTCCTAATCTTAGTTAGGAGGACTTTGTAAATTATTTAGGAGGGGGAATCACACAAATGACGTCCTTCGTGACAAAGAAATACAATATAAAATCATATGTAAGCACTAGCTAGTTAGTGGTGACAAACAACCTGTTTGATTCCTTCACATCCTATCCAGTGCAACCAGCCTGTTTAGGTGAGCTTTAAATTCTGAGAAGCAGCTGTTTGGTAGCCAGCTTTTAAGAATCTGGAAAAGCTCTAAAACTCAGCTTCTCCAGTTTCTGACTTCTTAATTCATTTTTCAGAACCTATAACTACAGATTCTCAAAAGCTGTGGACTGTTTAGGGCAGTATCTAACAGAAGCAGCTTTTGAGAAAAGCTGCAGCTGTAACAATCTCCCCTAAACAGGACCCATAGCTGATTTGATGTTGAGGTGGGGCTAGGTTGGGGTAGATTTTAAAGATCACAATAATACTTACTCCAACCAGCAATGGAGTTATCGTCTGACTATGCAGTGTCGATAAATTCATACAATAAAAAAATATAGCTTAATTTAGACGCATAACTATGACTAGTTATTGGAAATATATCCTATACACATATTTTTTCATGTACACACCGTGCACATCAATTAATAATTATGCTTGAAAATTTAGTAAAAAATTATACATGTACTTTCAATAGTACTGTATCTATGTTTAAAGTTTTAATTTAAAATTCATTATATTTTAGCCATACAAAAGTAAAGATGTTGATAATTTCAAGAGTACTTTATCCGTTTCACAATGTAAGTTATTCTAGCATTTCCCATATTCATAGTGATGTTAATGAATCTAGACATTCTAGATTCATTAACATCACTATGTGGGAAATGCTAGAATGACTTACATTGTGAAACAGAGGGAGTATAATTTTTTTAGAATTTTGTTTTGTCCCTATGTATATTGAATTTGAAGATGGGACTTTACATATAGATGTAAAGTTGTAAACTATTAAAAATAATACATTTTTTTCTAGAATATTTAGTGATATTTATTATTTGATATGTTACGGACGGTGTATGCAATTATAGGACCACATATCATGGGTTTTGTAGGGTTATTTTTTCACCTCTATTTTTTTGCAAGTATTTTGAGATACCGAGAGATATATGTACCTCGTTGTGTTAATCATCATACTTTCTCAACATATATATATACTTGTCATGGAGTATGTAATAGCATTAATATATAATTAATCTCACCTGCAAACGCCTGTAAATACGATCTTGTAATGTACACCCGAGACATAATAATTAACTGACGTTTAGTAAAACCAAATTAGAAGAAAAGCAACCAAAAATCATCCAAATTAACCGGGGGTCGTATACCTTTTTCCCCTAGCGTGGTGGAGAGCGTGGGGGAGCACGTGCGGGAGGTGGCGGTGGGTGACACGGTGGTGCCGGTGTTCACGGCGCAATGCAGCGAGTGCCCCGACTGCCTCTCCGACCGCAGCAACATCTGCTCCAAGCTACCCGACGTCCACGGCTTCATGCCGCGCGACGGCACGACGCGCTTCTCCTCCGCCTCCACCGGCGAGCCGATTCGCCACTTCCTCTCCGTGTCCAGCTTCGTCCAGTACACGGTCGTCGACGTCAGCCACGTCGTCAAGCTCGACGCCAACTTCCCGCCCGCGATGGCCTGCCTCCTCAGCTGTGGCATCTCCACCGGTAAGAACTACTGCAATTTATATTTCGCCTCAAAAAATATTATTCTTTCCGTTTCAGGTTACAAGACGTTTTGACTCTGGTCAAAGTTAAACTGCTTTAAGTTTTGCTAAGTTTGTAGAAAAAGTAGTAGCATTTTCAACCCAATACAAATTTATTATGAAAATATATTCAATTGTTGATTTTGTTTTAAACTAATTTAGTATTACAAATATTATTATATTTGTCTATAAACTTAGTCAAACTTAAAACAATTTGACTTTAACCAAAGACAAAACGTCTTATAACCTGAAACGCCTCAAAAAATATTATCACAAGGTTAACAGGTTTTACAACTTTTTTGAAAATATAAATTGAAGGTTAATTGGAATTTCAAAATTTTAACCAAATCTCGAGTGTTTATGAACCGTTGGAAGCAATAGAGAATTGCAGTTTTTTTTGGCCTGAGAGTCTGCTGCTACAGTAGTTAGTGGATGCATGCAAGGCGCACACGCAGTCGTGTTACTCGTGTACTCGTGTGTCGTGTGACGATGTATCGATTTCTGACTGCGACTTTGATTGGCGCGTGCAGGTGTTGGTGCGGCATGGAAGGTGGCGGCAGTGGAGCCCGGCTCGAGTGTGGCCGTGTTCGGATTAGGCGCCGTGGGGTTAGCGGTAATTAATTACTACCTCGTGTATTTTAGCACATGACGCCATTGACTATTTGTCTTATTCAAAATTTTCGTGTAAATATAAAAATATTTATGTCATGTTTAAGAAATATTTGATGATAAATTAAATCACAATAAAATAAATAATAATTATATTCTTTTTAAAAATAAGACGAATGTTCAAACGTTGGTAAAAAAATAACGAGAAATGGAGTAGTAACTAATTAATGGCAGCTCTTCTCATAGACCACCAAACTGAGTTAGTGATTAGTGGTTCGTGTTCCGTTTCGATGAGAGCTGTCAGTTAGACTTGTTCGTTTAATCCTCACGAGAGAGATTAAAAGAGATCAAGAGGAATAATTTACACACCAATAATTATGTAATGTATCTCCTCTAAATTTTCTCAACTTTCTTTCAAGAGGGATTAACCGAACAAAAGATCTCATTGTTTTACTTATACTTATATGCCAAAGTTTGAATTTTAGAACTTGGTTTTGATTTTGATTTTTCTTCATCGCAGTTTATTTTACAACATTTACTTTTAAATCATTAAGAACACACATATTAAAAATGTTTTACTTGCAAATAATTTTTTATTTGTTAATAATCGATTCGAATAAGAATATGAATAAGAGAAATAATGGGTTGAAAGTCTTAGGGGTTTACATTTGGTCTGGATCAGAGTAGTCGTGCACAATTAATACAATTAGTGCATGTACACATCATCCTCCATGTACTGAGATATCATAGTATATGCCCGTGCAACGTCGACGTCTCAACGTACGACTGTCTACTTCAGGTTGCTCAAGGAGCGAGGATGCGTGGGGCTACGAGGATTATCGGGGTGGACCTGAACCCGGACAAGTTCGACGTTGGTAGGCCAAGTTTGAATTCAGATTCAGTAATGCATGCGAACAATTATTTTGTTGTTTCATACGGAAATTTGAAGATCACCGTGAAAAGCTGCACAAAATTCCTGCATCCCGAAGAACAAAAACGTACGACGCCTTTGGCATCACATCGAATTAACTAACTCGTCTGCATGTTTGCGATGCAGGTAAGAGGTTGGGCATCACTGACTTCATCAACCCGAATGATACTGGTGGGAAGACCGTGAGCGAGGTCTGAACCTTTCTTTACCGAGGCGATCAATCATTACAGTACTTGTTACTACTCACACCATCCTAAAATACAAAAATCTAAAATCGGATGTGACTTATATTTTGAGACGGAGGTAGTAGTTCTTCATGATCACACTAATTGATCGATCGATCTCCAGGTCATCAAGGAGATGACCGGCGGCGGCGGCGCCGACTACTGCTTCGAGTGCATCGGCTCGGCCTCGGTCATGGCGGAAGCCTTCCAAAGCTCTCGAATGGTAAGTACTTGCTGTGCAGATCAGGCGCGAAACAATTAGTTTCGATCTCTCTGCTCGTGTAATAGCTAGGGACAGTGAGCTGATCGGAGTTTCTGCGTTTCCAGGGATGGGGGAAGACGATCCTGCTCGGCGTCATCGGCAGCATGGCGCCGATCGGCATCCCGCCGCAGGACCTCCTCCCGGGAAGATCGGTCATCGGGTCGCTCTTCGGCGGGATCAAGCCCAAGAACGACATCCCGATGCTGGCTCAGAAGTACCTCGACAAGGTGATCCACTATTCCACTTCAATCGATCGAACGGGGTTTTAATTAATTAAGAGTAAATTGCACTTTGGGCTATCTTTTTTAACCAATGTTTCGGTTTGAACTAGGGATAAGATGACTTTTTCACTTTGGACTAGATAAGTTTGCAAAAGGTTTCACCTTCAACCTCCTTTTTGCCTCTCCAAACTCCAGGCTCTAGCTCGCTCTCTCTCGTTGACCTTATGTGACTGTGAGCATAGACATGTTGAGGTCAAGCTTGAACTTTCGGCAAGCCCCAACGCTTGAACTTTCAACAATTCAGCAAGCCCCAATGCCCCATGGAGATCATCAACCTTGAGACCGTGGCCCCTGTACAGTCGTCGTAATGATGGTCAAGCTCACCAAGCTAGAGCTTGGGACAAAACGGGTCGAATCAAAGCTCTCGGATGGCAGATAAAGGATGACAGCAACGAGCAATTGAGCAGCGCTCAAGGGCCACGACAGCGAAGCAGCTCTTGGCCCCCACGTTGGAACTACTCAAGGACTGTGGCGGCCAGTGGCACTCCATGGCCATAGCAGCAAGAGTTGCACGATGATGATTGCGTAGGAGCTGCTCGAGGATAGTGGCTGCATTACAAGGCAGCGGTAGGCGGCACTCCAGAAGTCTATGCTTGAGCTTGGCTTGTTCATCAACTTGAGAAGAAAGAGGGGAGCAGATAGAAAAGGAGGTCCAAATTGAAACAATTCTGCAAAGTTATTTAGTCCAATGTGAAAAAGATGTCTTACACCTAGCCCAAATTGCATCTTTGGTAAAAAGAGGTGGCCCAAAGCGCAGTTTACTTTTTAATTAATTTGCTTGGTTCCTATTACTTCTTTAATGCTAAAATATTACATATCTTATTTAAAAATTACTATATTTTAAAACAAAGACAGTACATATCTTTTGTATATGCAGGAGCTGGAGCTGGAGGAGTTCATAACGCACGAGATGGGGTTCGAGGAGATCAACAGGGCGTTCGAGCTGCTCACGCAGGGGAAGAGCATCCGCTGCATCATCTGGATGGACGGCGCCAAGGTGATCGACAACGGCGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023892