BGIOSGA023898

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Revision as of 06:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023898| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023898, complete gene.| tag = P0560B0...")
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Gene Name

BGIOSGA023898

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023898, complete gene.

LocusTag

P0560B08.122

Ensembl Transcript ID

BGIOSGA023898-TA

Ensembl Protein ID

BGIOSGA023898-PA

Length

4149

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23660302..23664450

Sequence Coding Region

23664340..23664450,23663262..23663392,23662564..23662605,23662356..23662464,23661964..23662042
,23661553..23661849,23661365..23661477,23660950..23661057,23660806..23660868
,23660546..23660713,23660302..23660442

Genome Context

<gbrowseImage1> name=IndicaChromosome07:23660302..23664450 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:23660302..23664450 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGACGAGGTGGGGAGAGGCCACTTCGGCTACACCTGCGCCGCGAAGATCAAGAAGGGGGCGCGCAAGGGGGACGCGGTCGCCGTCAAGGTCATCCCCAAGGCCAAGATGACAACATCCATTGCTATAGAGGATGTCCGAAGGGAGGTGAAAATATTGAAAGCTTTGGCGGGACACAAGAACTTGGTTCAATTTTATGATGCCTATGAGGACAATGACAATGTGTACATAGTAATGGAGTTGTGTGAAGGAGGAGAGCTTCTGGATAGAATACTTTCCAGAGGTGGGAAGTACTCTGAGGATGATGCAAAAGCGGTTCTGGTGCAAATATTAAATGTCGTTTCATTTTGCCACATTCAAGGAGTGGTTCATCGGGATCTCAAGCCAGAGAATTTTCTATTTACTTCAAAAGATGAGAACTCTCAACTTAAGGCTATTGATTTTGGCTTATCAGATTTTGTAAAACCAGATGAGAGGCTAAATGATATTGTTGGAAGTGCTTATTATGTTGCTCCTGAAGTTCTGCACAGATGCTATAGCACAGAAGCTGATGTCTGGAGTATAGGTGTAATTGCATATATTCTCCTTTGTGGCAGTCGTCCATTTTGGGCACGCACTGAATCTGGCATATTCCGTTCCGTTCTCAAAGCTGACCCCAGTTATAATGAGGCACCTTGGCCTTCTCTTACTCCGGAAGCAATGGATTTTGTTAAGCGCTTGCTTTGCAAGGATCCACGTAGAAGAATGACTGCAGCACAGGCTTTAAGTCATCCATGGATCAGAAATTACAATGACATTAAGCTGCCACTGGACATCCTTATATTCCGACTTATCAAAGCTTATATTCGTTCCTCATCATTGCGAAAAGCTGCTCTAAGGGCTCTATCGAAGACTTTGACTGTTGATGAGCTTTTCTATCTGAAAGGACAGTTTTCTCTGTTGGAACCAGACAGAAATGGATGCATCACTCTAGATAATATCAGAATGGCCTTAACAAGAGAAGCCACTGATGCTATGAAGGAATCACGAGTTCAGGAGATTCTTGTCTCGTTAAGCGCTCTTCAGTACAGAAGAATGGACTTTCAAGAGTTCTGTGCAGCAGCAGTTAGTGTGCACCAGCTTGAAGCATTAGATAGATGGGAGCAACATGCCCGTTCCGCTTATGATTTCTTTGAGAAGGATGGCAATCGAGCTATCGTAATTGATGAACTAGCTTCTGAACTGGGTCTCAGCCCTTCAGTGCCATTGCATGTTGTTCTGCAAGATTGGATCAGGCACACCGACGGGAAATTGAGTTTCCTTGGATTTGTGAAGTTATTGCATGGCATGTCCAGCAGGTCCTTGTCAAAGATGAGATAG</cdnaseq>

Protein Sequence

<aaseq>MGDEVGRGHFGYTCAAKIKKGARKGDAVAVKVIPKAKMTTSIAIEDVRREVKILKALAGHKNLVQFYDAYEDNDNVYIVMELCEGGELLDRILSRGGKYSEDDAKAVLVQILNVVSFCHIQGVVHRDLKPENFLFTSKDENSQLKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRCYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRSVLKADPSYNEAPWPSLTPEAMDFVKRLLCKDPRRRMTAAQALSHPWIRNYNDIKLPLDILIFRLIKAYIRSSSLRKAALRALSKTLTVDELFYLKGQFSLLEPDRNGCITLDNIRMALTREATDAMKESRVQEILVSLSALQYRRMDFQEFCAAAVSVHQLEALDRWEQHARSAYDFFEKDGNRAIVIDELASELGLSPSVPLHVVLQDWIRHTDGKLSFLGFVKLLHGMSSRSLSKMR</aaseq>

Gene Sequence

<dnaseqindica>1..111#1059..1189#1846..1887#1987..2095#2409..2487#2602..2898#2974..3086#3394..3501#3583..3645#3738..3905#4009..4149#ATGGGGGACGAGGTGGGGAGAGGCCACTTCGGCTACACCTGCGCCGCGAAGATCAAGAAGGGGGCGCGCAAGGGGGACGCGGTCGCCGTCAAGGTCATCCCCAAGGCCAAGGTGATGTGCCGATTTTTGCTTGTTTCTGTTTTTTTTCTTGCAAATGCTGGAAAAATCAACTCCATGTTTGGTGAGTGTGACTGTGTGGTTGGTGGAATTTGAAGAAATTGGATGTGCATCTGCATGCCAATTTTCTGGGAAATGACGGTGTGAGGATTTAGATTTCCTGGAGGTGGTGTAGATTTGTTGATGGCGCAATTGGCTAATGCACTATGGTGTTCATCATATGCTGATTTTGCACAAAATCATCATACATTCATGTGTTTTTTTTTGGTCTGCATCTCTGTTTTATAGACTAGTGAAAACTTGAACCTCGTTTCTGCGAAAGCAAACGATGTCCGAATAACAAAGAGTTATGATGTGGCACTAGTGCACAACTGATTTCCTAAGAAATGTGGCCCCCTTCATGTAATAGAAGAACAGCATTTACCTAAAGGAGTAGGATTGCTGTTTCCAATTTCGATAAATATTTCGAGATCAATGCTGTCTTCCGACAGTATGTTTTGTGTATTAACATGGTACAGTTCTGTGTTGTGCATTGCAAGCATGACGAAACTTCACCAGTTCATTGCATGCCCTTGAGGATCATTGTAGAACAATATTTTCTGCTGTATACTTTCTGCCTTCTTGCATAGCATGCAAGGTTTTCTACTGTAAATATATGCCTGTTTGAATGATGAGATTTGAGTAAGCCTGGGTGCTATTTGTTGTGAAATTACGTTTGATTATGGTAGCTCCTTGGCAATTGGCAATATCGTTCTGTTACTGTTGTAGAGTACATGTAGTTCTAACATCTTTTATTCTGGTACTACCTTTATTTATCATCTTTTAGGAGGAAAAGAATTCTCAATTACTCGCAGTTCGCCACTTGGCATGAACTTAGTTCTTGATATGTACAACTGTACCTATTTTTTTGACATCGTATGGGGTTGTTCTGATTTTATCAGATGACAACATCCATTGCTATAGAGGATGTCCGAAGGGAGGTGAAAATATTGAAAGCTTTGGCGGGACACAAGAACTTGGTTCAATTTTATGATGCCTATGAGGACAATGACAATGTGTACATAGTAATGGAGTAAGCTTCCAATACCTGCAAAGTTGCAATATGATTGGCTTCATATTTCATATGGTACTCATAGAAAAACCTAAGTTTCTTCCACTGCCTGAGTTTCCACTAACTCATGGGAAAACCCAGGTTTCATATTTCATATGATTATACTATATTCTATCCACTCACCCCAAATTCCCAATTATTAATTACCCTTTCCTTTCTATTGTATGTTCTTGCTCTGAGCAGTAACTACAACTCAACTTTTTTCCAGGGTAGCATTGATAGTTTAAATATACGGTATTAATTATTTGTCTTATTAACATGCAGTTAAAATGAACTTAAATTAATGTCCTTTGTAGGTGACTGGGTGGTGTACCCTTACCTGAAGTTCTTTTAGCTTTTTTTTATTAAAAAAAAGAGATTAACATGCAGTTAAAATGAACTTAAATGGTATAAGTTTCATTGATTACACCCAGCCAAATTTTACCTCTACGGGCCTAAGGAGCAATGTCTTCTATAAGAAAATCTCCATGCATTTATATTTTTATTTTATACCTTCACCCAATGGTGATCCCTTGATATGTGTAAATCCTCTTCACTATTTATTTTTAACATGTGTCACACCATGTTCTGTTGATGTTCAAAGTTCCTATTGATTGATCCAAGTCCTATTTTTTTAGGTTGTGTGAAGGAGGAGAGCTTCTGGATAGAATACTTTCCAGGTATGTTAAATGCAAACTTTAGTAGTGGGTACAAGCACAGCACTATAATATTCATTACAAATTGATTTAGTACAACTGTTTTTCATTTGCTGTAATTAGAGGTGGGAAGTACTCTGAGGATGATGCAAAAGCGGTTCTGGTGCAAATATTAAATGTCGTTTCATTTTGCCACATTCAAGGAGTGGTTCATCGGGATCTCAAGCCAGAGGTGATGTGATTTTTCGACACCCCAATCATTGTTTACTTGTCAGCTTTTTCATATTTGATGTTTTTGAAGCGCTGAATTTCATGATGACAGTAAAACTAGCCAGGCCTTTAATGGAAACTGCAATTATTTTTATGTTTCTTCTTCCATTCTACGTCCTATCCATGATCTTGAGCATTGCAGTATTCAGTTATCCTATTATTTGTTCATAACATTCCTTGCATGGTCTATTTATTTCATTACTGTTCCTTTTTCTGTGCAATTATGTGAACTGTTTTCACGATTGAGAGACTAACCAAAGATGATCCTTTTTCAGAATTTTCTATTTACTTCAAAAGATGAGAACTCTCAACTTAAGGCTATTGATTTTGGCTTATCAGATTTTGTAAAACCAGGTTAGTTTCGTACTGCTCAAACAGCCAAGATTAACTTATTGATTACTATATCCACAAGTGAATATGGTTCGCTGGTAACAGATTCTTAAATATGCTTTTCTAATATTTATGCAGATGAGAGGCTAAATGATATTGTTGGAAGTGCTTATTATGTTGCTCCTGAAGTTCTGCACAGATGCTATAGCACAGAAGCTGATGTCTGGAGTATAGGTGTAATTGCATATATTCTCCTTTGTGGCAGTCGTCCATTTTGGGCACGCACTGAATCTGGCATATTCCGTTCCGTTCTCAAAGCTGACCCCAGTTATAATGAGGCACCTTGGCCTTCTCTTACTCCGGAAGCAATGGATTTTGTTAAGCGCTTGCTTTGCAAGGATCCACGTAGAAGAATGACTGCAGCACAGGCTTTAAGTAAGATCCATTCTATCCATATGGATTCCAATGAATGATGAATTGTTCTTGGTAATCTTTATATTTCGTTTTCAGGTCATCCATGGATCAGAAATTACAATGACATTAAGCTGCCACTGGACATCCTTATATTCCGACTTATCAAAGCTTATATTCGTTCCTCATCATTGCGAAAAGCTGCTCTAAGGGTAATAAAACTTGTTCTGTTTTTCTCCTATTGTTTTACATAGGTAAATGCTGTAATCTTTTAATGGCCGTGAAGTAATTTGCATTTTTAGTAAAAAAATATTATTTCTTTTCGGTTATCTCCTATAAATTCTTGAACTAGACCAGTTATAGTTTTTTTTGCCATAATTTTGTTAGTTCAACTTCCAAGAAATCCTAGATTTTTTTTCGTGCCAATTGCATTCAGGATTTTGTCCGGTGATTGTCCAATTTTACTTTGTCTGGAATCCACACTTATTTTAATGTATTTTCTTTCTTGACCTGTTACAGGCTCTATCGAAGACTTTGACTGTTGATGAGCTTTTCTATCTGAAAGGACAGTTTTCTCTGTTGGAACCAGACAGAAATGGATGCATCACTCTAGATAATATCAGAATGGTTGGTCCACCATAGAGCCCTGACATGCTCTCTTCTGTTCATTTTTAAGCTACTTCCTGACCATTGTTTTCATTCTCTTAGGCCTTAACAAGAGAAGCCACTGATGCTATGAAGGAATCACGAGTTCAGGAGATTCTTGTCTCGGTATGTTTGATTTTTTTTAAAAAAAAATAGGACAGACTTTCCATTCATGCATAGTTGTACTTGCTTTATTTATAACGGGATCTTCATTTCAGTTAAGCGCTCTTCAGTACAGAAGAATGGACTTTCAAGAGTTCTGTGCAGCAGCAGTTAGTGTGCACCAGCTTGAAGCATTAGATAGATGGGAGCAACATGCCCGTTCCGCTTATGATTTCTTTGAGAAGGATGGCAATCGAGCTATCGTAATTGATGAACTAGCTTCTGTATGCGATGCCTTCCTTCCTATGTTCTTTCTAATTGGTCGATCTCATGTTCTTTCTGATCGGTCGATTTGGTTTCCTTATACCTTCACTTGTTCTTTCTCAGGAACTGGGTCTCAGCCCTTCAGTGCCATTGCATGTTGTTCTGCAAGATTGGATCAGGCACACCGACGGGAAATTGAGTTTCCTTGGATTTGTGAAGTTATTGCATGGCATGTCCAGCAGGTCCTTGTCAAAGATGAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023898