BGIOSGA023899

From RiceWiki
Revision as of 06:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023899| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023899, complete gene.| tag = OsI_268...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023899

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023899, complete gene.

LocusTag

OsI_26895

Ensembl Transcript ID

BGIOSGA023899-TA

Ensembl Protein ID

BGIOSGA023899-PA

Length

4040

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23654891..23658930

Sequence Coding Region

23658615..23658930,23657693..23657810,23657374..23657435,23657221..23657275,23657045..23657141
,23656826..23656924,23656237..23656345,23654891..23655624

Genome Context

<gbrowseImage1> name=IndicaChromosome07:23654891..23658930 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:23654891..23658930 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTGTAACGAGGAGGCGCGCCGCCGCAGCGGTGACGGCGGTGCTGGTCGAGGAGGAGCGCGCCGCAGCGATCGACATCTCGTCGGATTCTGACGCCGGATCTGAGTCTGGGTCGGAGGAGGACGACGAGGAATCCACCAGCGACGAGGACTACTACATCGACATCAGCGACAGCGACGGCGAGGAAGGCGGCGGCGCGGGGAGCGAGGAGGAGTCGGAATCGGAATCGGAGGCGGAGCGGGAGCGGGAGCCGGAGCAATCAGGCGTGGATCGGGGCGAGGCCTCCTGCAGAAAAATCGCCGATCTCCTCCGCGCGGGGCGAAATTTGGATGGGATTAAGCTGGTTGATTGCAAAGCATATTTAAAGAAGAATGGCCTTAGCCAAACTGGGGACTTGGCTACTTGCATAGAAAGAATAGTGTTGCATTGGAGGTTCAAAGATAGGGATCCAGAGAAGATCTATCCACGCTCATCCTTTTGTATTAACTGTAAAGGTGATGTCTGTAGAGGTGATACCGTTTTATTCAAGCAGAAGGTTTATGAGAAAAGTGGAAAAAGGCATTCAAAATGTATAGGAAAGCGAATTGTAGCTGGGAGTGTTATTAAGGAAAGTTATGGAAAAGAGAAGCAGCAGCACACTTTTACTATCCAAGTTTTCTGGAGCAAAGGAGTAGGCAAATTACCACCTTTGTATCTGCTACTTGTCAAAGGGCGCAATCTCTACAGAATGATGACTTTCCGTCAGCCTTGGCTAAATGAAGCAGATAGATTGAAGGCTCTAGATGAGAAGCACAGCAGGGGAGATGCTGCAAGGCGTGTTCGTGCATTGAGTAGACCTGATGCTGCAGGAAACAGCAAGAAAACGACGCAAAAGGGAAAACATCAATCTCAAGCAGGACGGCCTGATAGTGGAAGCAGTATCAAGAAAGGCAAGAAGCGTGTTATGCAGTCCTCCAATCCTGATCTCCCCACAAAAAGATCCAGGAATGAAGAGAGCCAAGCGTCTTCCGCAAAACAATTCGCTGGTGGTCAGAACACGAAGACAAGTCGTGCCCGGCTGGATAGAAGTGATCGCAGCACCAACAGAGCTAGGATGAGAGAAAGGAAAGCTGATTCCCAGCAAAATCTCGCTGGTGGCAGCCATGCTCAATTCGGAGAAAGGAATGCAGGTTCAGGTTATGATATGCAGGCAAGTCATGGATATCTGGTTGGAGTGCAGCAGTCTCCCTTTGAGATCGTGAGGCCCCAGAGGCCACCTCCATTCCGTGAAGTTGGCAATGCCTCGCAACCTCACGCAGATGGCAGATCAACGGCATGCCCACACCCTAGGATGGGTTTCCAGCATCCAAATGCGGCATTGGCTGGTTCGCATCCACCTGCTTATTATCTGGGAAACACACCGAATCAATTTCCATCATTTGCATCACTCAACGTGCGACAAACTGTACACCACCATCCTCTGGATCAACTTGGAGCGTCATTTGCACCATTCAATGTGCCACAAACTGTATACCGTCCTCGTCCGGAAGGAGGATATGCGATGCCACAGTTCAGATATTCTGGTGGTAGCAATGGTTTTCCTCGGTAG</cdnaseq>

Protein Sequence

<aaseq>MPVTRRRAAAAVTAVLVEEERAAAIDISSDSDAGSESGSEEDDEESTSDEDYYIDISDSDGEEGGGAGSEEESESESEAEREREPEQSGVDRGEASCRKIADLLRAGRNLDGIKLVDCKAYLKKNGLSQTGDLATCIERIVLHWRFKDRDPEKIYPRSSFCINCKGDVCRGDTVLFKQKVYEKSGKRHSKCIGKRIVAGSVIKESYGKEKQQHTFTIQVFWSKGVGKLPPLYLLLVKGRNLYRMMTFRQPWLNEADRLKALDEKHSRGDAARRVRALSRPDAAGNSKKTTQKGKHQSQAGRPDSGSSIKKGKKRVMQSSNPDLPTKRSRNEESQASSAKQFAGGQNTKTSRARLDRSDRSTNRARMRERKADSQQNLAGGSHAQFGERNAGSGYDMQASHGYLVGVQQSPFEIVRPQRPPPFREVGNASQPHADGRSTACPHPRMGFQHPNAALAGSHPPAYYLGNTPNQFPSFASLNVRQTVHHHPLDQLGASFAPFNVPQTVYRPRPEGGYAMPQFRYSGGSNGFPR</aaseq>

Gene Sequence

<dnaseqindica>1..316#1121..1238#1496..1557#1656..1710#1790..1886#2007..2105#2586..2694#3307..4040#ATGCCTGTAACGAGGAGGCGCGCCGCCGCAGCGGTGACGGCGGTGCTGGTCGAGGAGGAGCGCGCCGCAGCGATCGACATCTCGTCGGATTCTGACGCCGGATCTGAGTCTGGGTCGGAGGAGGACGACGAGGAATCCACCAGCGACGAGGACTACTACATCGACATCAGCGACAGCGACGGCGAGGAAGGCGGCGGCGCGGGGAGCGAGGAGGAGTCGGAATCGGAATCGGAGGCGGAGCGGGAGCGGGAGCCGGAGCAATCAGGCGTGGATCGGGGCGAGGCCTCCTGCAGAAAAATCGCCGATCTCCTCCGCGGTAATCACCTCGATCCCCTCCTCGCTGCGTGCGCGTGCGCGCACCACCATTTGTGCTCGCATGCCACTCGGACGAACTGGCTATCAGAGGAGAGGAGGTGCGGGGCGGGAGGGTGCCTGATTGATTCGATTCAGGATTGGCGACTTTGCGTCGAGGGGGAGCCATCGCTTCGCCATGGCGACCGGCTTGCCGGAGGAAGAGACGACGGGGAGAGTGGCGGCTTCGCACGGTGGCGTTTACTGTTGCGTGGGGAATCAGCTTAGGCCCGCTTGATTTTTAGATCATTGAGCACATTATTATGGGGAATTATATTTACTTATCATTTAGATAAATTGATTATTTCACAAAATTAACTCAATAAAATAGTTTTAGTGGTATAGAAGGAAGTTTTCTAAAGATGTATTTTCGAACCGTGGGACAAATAATTCAAAAAAAAAATCTGAAGGGTCCAAACCAGAGGTTATTTTGTAAAAATCCAGATCGCTATACCTACCAAATGGGGTTATTTGTAGCACAAAATTCTCGGGTAGCGAATAGCGGTTCAGAAGGGGGCTATTTTGTAAGAAAATGGCTTGCTGCCAACATTAGCAATTAAAATTGCGGGTTATTTGTAAAAGTCAATGATGGGCTATTTTGCAAAATATTCTTCACTGCCATGGATCAATCATATGATCCTTTGATAATTTACCTTATGTTTCCAGAATGAAAAATATGCAGTTGAACATCATACTAATATGGTCTACTTGCTTGAATAGTATTATATTCCTACAACATAAGCTAATGAACAGTTTTTTTTCATTGTAGCGGGGCGAAATTTGGATGGGATTAAGCTGGTTGATTGCAAAGCATATTTAAAGAAGAATGGCCTTAGCCAAACTGGGGACTTGGCTACTTGCATAGAAAGAATAGTGTTGCATTGGAGGTTAGTTACTTGGATGATTCTCTGTCGAATTATGCAGTAATGTTATGCTTATCTATCCCATGATCCGGAGTAGCAGTAATGTAGAGAACACCACTTCCTCTGTGCCATTTCTTTCTTTTCATTTATCCTGATTCTTTTGTTCTGTAATAGTATTGTTATGCATTGAAGAGTTTTCCTTTCATCCTGGAAATGCATTGATCTTGCAACACTTCAGAACAGCCAGACGCATGTAACATTCTGCTTTGTTTTCCTATTAGGTTCAAAGATAGGGATCCAGAGAAGATCTATCCACGCTCATCCTTTTGTATTAACTGTAAAGGTGCCACCTCAGTTGGAAACAAGCCTTTATCTGTCTGCATACGAAATTATCCAGGTTATCTGTCTGAATAAAACAAGCCTTTATCTCTCTCACTTTAGGTGATGTCTGTAGAGGTGATACCGTTTTATTCAAGCAGAAGGTTTATGAGAAAAGGTAGAAATCTGCACTTCTGTACTCACTAGCATTTGCGTAGATTAATAATGAGAGAACTTCCCTTTGCTGACTTTGTTAGTGGAAAAAGGCATTCAAAATGTATAGGAAAGCGAATTGTAGCTGGGAGTGTTATTAAGGAAAGTTATGGAAAAGAGAAGCAGCAGCACACTTTTACTGTAAGGATTAATTTCAGTAATATATTTCTGCTATTGTCTGAAAATAATAATTATATGTCACTGCTGCAGCATTGGTTTTCTTGAGCTTCTACTGACTCCTTTAGCTGTTGAATTTGATAGATCCAAGTTTTCTGGAGCAAAGGAGTAGGCAAATTACCACCTTTGTATCTGCTACTTGTCAAAGGGCGCAATCTCTACAGAATGATGACTTTCCGTCAGGTAGGATAGCTCTTACCTGAATTGTCTTAAGTATGTTACCTTTTAGATTTTAGGGATGCAAGCGGGCCAACCTGTGAGCCCGGACCCCGACTTATAGGCAAAATTTAGTGGGTAACTCGCGGGTTAGCTTGTGGGTTACCTACTAATTTAACCTATAAATAGGTTTATGGGTTGATCCACTTGTATCTCTAGATACGGCAAGCCGGGTAACGATGTGAAAACCCACGGATTACCACTTATTTGACCTATAAGTGAGTTGGCGGGTTGGCCAACCCGCATCCCTATTTTAGAACTTGTGCTATCTAGACAATACTGTAGCAGATTAGCTGTCATTCTCATGTGTTCAAAAAATCTTGTTGATATTATCATTTTCTGTGGATGGGTTACTTATATGCAGCCATAAATGTGTTTATATCTATCTCAGGATGAGTTTGTATACTTTTCAGCTTTACATTGAAGTTCTTTTTTATTATTATTTAGCCTTGGCTAAATGAAGCAGATAGATTGAAGGCTCTAGATGAGAAGCACAGCAGGGGAGATGCTGCAAGGCGTGTTCGTGCATTGAGTAGACCTGATGCTGCAGGAAACAGTAATTTCTATACTCAAGAACCCTGTTAAATAAAGCTAAGATACTACATGTTTCCTTAACCTGATTACAATTGAGAGAGAATCTTTCTAATGGCAGTTGCCTTCTAAATTTTCTGAGTGCTATTACATATGTAGGTTCATATCAGTCATGATGTCGCATGCACCATGTGACAAATACTATAAAATGTTTGATAGACCTTTAGTCGCATACTACAGATTTTATAATGACATGTAATCATGTATTGGGCATTTCGCATTGAGAACTATAATATTCCATGGTAGAGGCAGCTGTTTCTTAGAGGGAATCGTTTAAAAGCCCTTTTTAGTCACTTTTACATGGAGAAGAGCATAGTTTTGCACAAGCCATTGTAAAAATGTAATTATAACTTAATTCTGAGCTGATCATAAACTTAAAGAGATACACTTCTGTTTCTTGGAATGTTTTTCATGCATCGTTTTGTTTATGAGTTTTGTTCAGAATGAATTTTATATTAGCTCTTAGCAATTTCTCTCTCCACTTTTCAAGTCAATTATCTTGAAACTGTACGTATCTTTTGCCAAACTAATTGAATTCCAACTTCAATTTATAACATATCCTTCTGGTGGCATAAAGGCAAGAAAACGACGCAAAAGGGAAAACATCAATCTCAAGCAGGACGGCCTGATAGTGGAAGCAGTATCAAGAAAGGCAAGAAGCGTGTTATGCAGTCCTCCAATCCTGATCTCCCCACAAAAAGATCCAGGAATGAAGAGAGCCAAGCGTCTTCCGCAAAACAATTCGCTGGTGGTCAGAACACGAAGACAAGTCGTGCCCGGCTGGATAGAAGTGATCGCAGCACCAACAGAGCTAGGATGAGAGAAAGGAAAGCTGATTCCCAGCAAAATCTCGCTGGTGGCAGCCATGCTCAATTCGGAGAAAGGAATGCAGGTTCAGGTTATGATATGCAGGCAAGTCATGGATATCTGGTTGGAGTGCAGCAGTCTCCCTTTGAGATCGTGAGGCCCCAGAGGCCACCTCCATTCCGTGAAGTTGGCAATGCCTCGCAACCTCACGCAGATGGCAGATCAACGGCATGCCCACACCCTAGGATGGGTTTCCAGCATCCAAATGCGGCATTGGCTGGTTCGCATCCACCTGCTTATTATCTGGGAAACACACCGAATCAATTTCCATCATTTGCATCACTCAACGTGCGACAAACTGTACACCACCATCCTCTGGATCAACTTGGAGCGTCATTTGCACCATTCAATGTGCCACAAACTGTATACCGTCCTCGTCCGGAAGGAGGATATGCGATGCCACAGTTCAGATATTCTGGTGGTAGCAATGGTTTTCCTCGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023899