BGIOSGA023902

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Revision as of 06:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023902| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023902, complete gene.| tag = P0552F0...")
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Gene Name

BGIOSGA023902

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023902, complete gene.

LocusTag

P0552F09.120

Ensembl Transcript ID

BGIOSGA023902-TA

Ensembl Protein ID

BGIOSGA023902-PA

Length

4226

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23542975..23547200

Sequence Coding Region

23546970..23547200,23546694..23546744,23546153..23546203,23545975..23546040,23545829..23545890
,23545402..23545480,23545224..23545328,23544958..23545068,23544557..23544694
,23544287..23544361,23544045..23544165,23543818..23543972,23543669..23543743
,23543209..23543412,23542975..23543091

Genome Context

<gbrowseImage1> name=IndicaChromosome07:23542975..23547200 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:23542975..23547200 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGCCGCTTCGTCGCCGACCGGGCGCGGCGCGCGGTGACCTCCTCCGCCGCTTCGATGCGCGCGGCCGCCACCAGATCAGCCGCGCCGTCTGCCGGGGCTGCCCCCTCGGCGCCATCCCCGCCGCCGCCGGCGGCGGCGGCGCTGGCCATGGCTTCCGCCATGGTGAGGGCCATGTCGACCGCGGCTGCCGGCGCGGCGCCGGTGTCACTCGACACCATCAACCCCAAGGTGTTGAAGTGTGAATATGCTGTCCGTGGAGAGATTGTTACACATGCTCAGAATTTACAACAAGAATTACAGAAAAACCCAGACTCACTTCCTTTTGACGAGATACTTTATTGCAACATTGGAAATCCCCAATCTCTTGGCCAGCAGCCAGTTACATTTTTCAGAGAGGTCTTGTCGTTATGTGATCATCCAGCTCTGCTGGATAAAAGTGAAACTCATGCTCTGTACAGTTCAGATGCTATAGAAAGAGCATGGCAAATTCTAGACAAGATCCCAGGAAGAGCAACAGGAGCCTATAGCCATAGTCAGGGTATAAAGGGTTTGCGTGATGAAATTGCTGCTGGAATTGCTGCCCGTGATGGTTTTCATGCTAGTGGAGATAACATATTCCTAACAGATGGAGCAAGCCCAGCAGTGCACATGATGATGCAATTATTGATAAGATCTGAGAATGATGGCATTCTCTGCCCTATTCCGCAATACCCGCTCTACTCCGCGTCAATTGCTCTCCATGGTGGTTCTCTTGTTCCTTATTTCCTTGATGAAGAGACAGGTTGGGGACTGGAGGTTGATGAGCTTAAGAAACAATTGGAGGAGGCTCAGTCTAAGGGTATCACTGTTAGAGCACTTGTTGTTATAAATCCAGGGAACCCAACTGGGCAGGTTCTTGCTGAGGAAAATCAAAAGAAAATTGTTGAATTCTGCAAAAATGAAGGACTTGTTCTTCTTGCAGATGAGGTGTACCAAGAAAACATATATGTAGAAGACAAGAAATTCCATTCTTTCAAAAAGATCGCACGATCAATGGGATACACAGATGATGATCTTCCTTTAGTATCATTCCAATCAGTTTCGAAAGGTTACTACGGAGAATGTGGAAAACGAGGAGGCTATATGGAAGTAACTGGATTTAGCGCTGATGTAAGGGAACAAATTTACAAGGTGGCATCAGTAAACCTGTGTTCCAACGTGTCTGGCCAAATACTTGCTAGCCTCATAATGAACCCACCGAAGGCTGGGGATGAATCCTATGAATCCTTCATGGTAGAGAAAGACGGGATCCTCTCCTCTCTGGCTCGACGTGCAAAGGCTTTGGAAGAAGCCTTCAACAGCTTAGAAGGCATAACATGCAACAAGGCCGAGGGTGCGATGTATCTCTTCCCTCGCATCTATTTGCCCCAGAAGGCAATTGGAGCTGCCCAAGCAGCTGGTACTGCCCCAGATGCGTATTATGCCCGCCGCCTTCTTGAAGCTACTGGAATTGTTGTTGTTCCTGGTTCTGGATTTGGGCAGGTTCCTGGAACGTGGCATTTTAGATGCACAATTTTGCCACAGGAGGACAAAATACCAGCGATCATATCCAAGTTCAAGGAGTTCCACGAGAAGTTCATGGATGAATTCCGGGATTAA</cdnaseq>

Protein Sequence

<aaseq>MRRFVADRARRAVTSSAASMRAAATRSAAPSAGAAPSAPSPPPPAAAALAMASAMVRAMSTAAAGAAPVSLDTINPKVLKCEYAVRGEIVTHAQNLQQELQKNPDSLPFDEILYCNIGNPQSLGQQPVTFFREVLSLCDHPALLDKSETHALYSSDAIERAWQILDKIPGRATGAYSHSQGIKGLRDEIAAGIAARDGFHASGDNIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGSLVPYFLDEETGWGLEVDELKKQLEEAQSKGITVRALVVINPGNPTGQVLAEENQKKIVEFCKNEGLVLLADEVYQENIYVEDKKFHSFKKIARSMGYTDDDLPLVSFQSVSKGYYGECGKRGGYMEVTGFSADVREQIYKVASVNLCSNVSGQILASLIMNPPKAGDESYESFMVEKDGILSSLARRAKALEEAFNSLEGITCNKAEGAMYLFPRIYLPQKAIGAAQAAGTAPDAYYARRLLEATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIISKFKEFHEKFMDEFRD</aaseq>

Gene Sequence

<dnaseqindica>1..231#457..507#998..1048#1161..1226#1311..1372#1721..1799#1873..1977#2133..2243#2507..2644#2840..2914#3036..3156#3229..3383#3458..3532#3789..3992#4110..4226#ATGCGCCGCTTCGTCGCCGACCGGGCGCGGCGCGCGGTGACCTCCTCCGCCGCTTCGATGCGCGCGGCCGCCACCAGATCAGCCGCGCCGTCTGCCGGGGCTGCCCCCTCGGCGCCATCCCCGCCGCCGCCGGCGGCGGCGGCGCTGGCCATGGCTTCCGCCATGGTGAGGGCCATGTCGACCGCGGCTGCCGGCGCGGCGCCGGTGTCACTCGACACCATCAACCCCAAGGTGACGATCCATCCCCCCCACCCCTCCCCTCCCCCTTCTTCGATTCGGTTCCTTCAGCTTGTTTGGCTTGTCGTGTGAGCGTGTTTTCAGCTTGCGATTTGCTGAAGGATGGTAAAAGTGAGATGTGTACTTCTCAGCAGCAATGGGATGCTAGATAGCTGGAACTTGTGCTTGAAGGTTCACAATGCATCGTCCTATCTAATCTGGTTTGTTCTGTTGCTTCAGGTGTTGAAGTGTGAATATGCTGTCCGTGGAGAGATTGTTACACATGCTCAGGTGCGTGGAATCTGTCTCATGTACATCAACTCATATTGCATAAGCAGGAAATGCAGAGATTCGGTAGGGGTTTTAGTGGCATAGCTGAGAGCTTCTTTGCAGAAGTCATATTGCCGATTGGTCGACACCATTCTTTCTTGGTTCATGATGGGAGAAATAGGGATCTAATTATCCAATGTGGTGGCTGATGCTATGTGATTACTAATGCTCTAATGTTTCAATGGGATGGACTGTGGCTGGTCCAATATGATCTTGAACATTCAGTTTGTCTGATATAGTTTATTGTCCTGAATATTTTTCATCATATCATTTGTCCTGATTGTAGCAGTCAAACTGTACTCCTACAGTGATCGGTTCTTTCGCTAGTGTTCTATTACTTTACTGAAATCTGCAAAGTGCAAAATCTGTTATTAGTAGTTCTTATTGTCTATCTCTTTAGTTTTATGACTTCCTTAGGAACTTGGATTATGACCTACATTTTATTCTGCAGAATTTACAACAAGAATTACAGAAAAACCCAGACTCACTTCCTTTTGACGAGGTTTGTATTTTGATCACATGAAGTATTCTCTATGGTAAAATAAATAAATAAAATCTAATAATCAATTATCAAATATCAATATATTTACCTGCACCCATATATTTAATGTCAGATACTTTATTGCAACATTGGAAATCCCCAATCTCTTGGCCAGCAGCCAGTTACATTTTTCAGAGAGGTGAGTTTATATTCCTTGGTTTCTAATTTGGCTGAATGACTGCAAGTTCCAAGGCTTCTTACTAGCCCGTGTTGCTTTTTCCAGGTCTTGTCGTTATGTGATCATCCAGCTCTGCTGGATAAAAGTGAAACTCATGCTCTGTACAGGTATATCAAACTGTTTAATCTTAGATGACTATAAGCGTATTAGTGTCAAACTTTATTGTAATGCATACATTGAGGGGTGAGAAATGAGAACTCAATCTCTAGTCTGTTAGGGTAGCTATTAAGATTCTTATGATCTGTTGTGCCTGCATTAACTTGATCGTTTTGTATTTTTTAATCAATGGAAAGTAATTACTGTAAATTGTTTGACAATTGTTGCATGCTAATAACTTATGCGCCTATCTAATTCTAATAAACAACCTGTGGAGCATTTGCGAATAAGTAGTATGCTGGCTACTCTACTCAATTTTTTTTTCAAATTTTAGTATACTGATTTATGTTTGCATACAGTTCAGATGCTATAGAAAGAGCATGGCAAATTCTAGACAAGATCCCAGGAAGAGCAACAGGAGCCTATAGCCATAGTCAGGTACTCATTTACTGTTTGATGAAATCTGTCATAGTTTCATGAGCTTCATCATTCATGTGGTCCTCTATTTCAGGGTATAAAGGGTTTGCGTGATGAAATTGCTGCTGGAATTGCTGCCCGTGATGGTTTTCATGCTAGTGGAGATAACATATTCCTAACAGATGGAGCAAGCCCAGCAGTATGTTGAAAAGATAATCTATAATCAACATTAACTGATTACCATTAATTAATAATTTATGATCAATTAGGATACTCTTTTTGCCAGTTACCCTTAATTTCCCATCTCTACGTAATGTGCCTTCACTGAACCAGTGTAATTTCTTTTTCACCTAGGTGCACATGATGATGCAATTATTGATAAGATCTGAGAATGATGGCATTCTCTGCCCTATTCCGCAATACCCGCTCTACTCCGCGTCAATTGCTCTCCATGGTGGTTCTCTTGTATGTACTATGACAATGCTTATAACGCTATACAATTATGTTTTTCTTGTTTAGAGCAACAAATCCAGGAAATGCTTTGAATTATATCCTTTGTCGAATTTTGGGTTCAACTCAATTTAAATTTACAATGAAGTGATAATCACCCATTGGTTTTGCTTTGTACATAATGTGGTTTTGGCATTATATTATTAGGAATCCTTCAAACTTGCAGCGATGCATGCCCATGTCTGATGACTTAATATGCAGAACATATCCAATTTCAGGTTCCTTATTTCCTTGATGAAGAGACAGGTTGGGGACTGGAGGTTGATGAGCTTAAGAAACAATTGGAGGAGGCTCAGTCTAAGGGTATCACTGTTAGAGCACTTGTTGTTATAAATCCAGGGAACCCAACTGGGCAGGTGGTTATGATTTATTAACTTATCATACATTTACAGAAGGCCAATACCTTGCATAAAAAAATCTACTTCATAAGATATCAATTCTGTCTATTGGAACATGGTGAATAGATACTTTAGAAGAAACCTTCACTTCCTTTTTACCATCAAGAATCATGGTCTTGGAGTGGTTACTTATCCCATTTCTACTTTCATCAGGTTCTTGCTGAGGAAAATCAAAAGAAAATTGTTGAATTCTGCAAAAATGAAGGACTTGTTCTTCTTGCAGATGAGGTGAGTTCAGCACTTTTTGTATGCGAGGGCTTGAAACATTTGAGTTTTGATGAGCTATTTGAACACTTCCTGTGAGTTGGGTAGGTCTTGTAAGCTCACTTGTTGATTCATTCCTTGAAAGGTGTACCAAGAAAACATATATGTAGAAGACAAGAAATTCCATTCTTTCAAAAAGATCGCACGATCAATGGGATACACAGATGATGATCTTCCTTTAGTATCATTCCAATCAGTTTCGAAAGGTAATTATATTCTTCAGTTATTTGTATTTGCATCTCCAAGCATATGGTAAATCTTACTGTTTATACAATTAGGTTACTACGGAGAATGTGGAAAACGAGGAGGCTATATGGAAGTAACTGGATTTAGCGCTGATGTAAGGGAACAAATTTACAAGGTGGCATCAGTAAACCTGTGTTCCAACGTGTCTGGCCAAATACTTGCTAGCCTCATAATGAACCCACCGAAGGTCTGATAGCTTGTTCGCAAAGCAATTATTAAGTTAAATTATGGCAGTAATTTACAAGGTTGCTTCTTCCACAGGCTGGGGATGAATCCTATGAATCCTTCATGGTAGAGAAAGACGGGATCCTCTCCTCTCTGGCTCGACGTGCAAAGGTTTGTCTCACTTGTTGTAATGGTGGTAAACAATATTCACTGCTGGAACTGTGAATTTAGAACTGCTGCTGCTTCACCTGTGTATTATGCCAAAACATGGAAAAAAAATCCAGAATACTGTTACTGGCGTTTAGTGCTAATAAAGTAACACTCAGATACACAAACATAGCTTGTGGAAATAACTTTCTTCTAATCTAAGCTACTGTTTGAAGTATCAAGCACCTTCTCATTGTTTGGTCCTCTCCATTTTACACAGGCTTTGGAAGAAGCCTTCAACAGCTTAGAAGGCATAACATGCAACAAGGCCGAGGGTGCGATGTATCTCTTCCCTCGCATCTATTTGCCCCAGAAGGCAATTGGAGCTGCCCAAGCAGCTGGTACTGCCCCAGATGCGTATTATGCCCGCCGCCTTCTTGAAGCTACTGGAATTGTTGTTGTTCCTGGTTCTGGATTTGGGCAGGTAGGTTTATCTCAAATGCATGGCATTTCCGAAAACAATTAGGCTCTTGTTGGTTCAAAACACTGTTGAGTTCTTACTGATATTATTCTGTTGACTTATCTTGTGATGTGAATTCAGGTTCCTGGAACGTGGCATTTTAGATGCACAATTTTGCCACAGGAGGACAAAATACCAGCGATCATATCCAAGTTCAAGGAGTTCCACGAGAAGTTCATGGATGAATTCCGGGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023902