Os12g0114200

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Revision as of 10:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0114200| Description = PAP/25A core domain containing protein| Version = NM_001072514.2 GI:297612541 GeneID:4351312| Length = 5206 bp| Def...")
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Gene Name

Os12g0114200

Description

PAP/25A core domain containing protein

Version

NM_001072514.2 GI:297612541 GeneID:4351312

Length

5206 bp

Definition

Oryza sativa Japonica Group Os12g0114200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:706630..711835

Sequence Coding Region

710626..710883,711072..711164,711650..711835

Expression

GEO Profiles:Os12g0114200

Genome Context

<gbrowseImage1> name=NC_008405:706630..711835 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:706630..711835 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caggtctttccatttggatctgttccgttgaaaacttatcttcctgatggagatattgatttgactgcctttggccattcaagtgatgaaattttagcaaaacaagtacaggctgttttagaatcagaagaggcaaggaaagacgctgaatttgaagtcaaggatgtccaatatattcatgcagaggtcaagttggtgaaatgcattgttcaaaacatcattgtagacatctcattcaatcagtttggtggactgtgtaccctttgttttctcgagaaggttgatcaaaaatttgaaaaaaaccaccttttcaagagaagtataatgctgataaaagcttggtgttattatgaaagccgcattcttggtgctcaccatggattaatttctacctatgcattggagatattggtgttatatattttccatctcttccatggaacattggatggtccactagctgtaagttctgacttccaactattctgcagcatttgtaaagttcttgtttctgacaccctacatacgttgccataa</cdnaseq>

Protein Sequence

<aaseq>QVFPFGSVPLKTYLPDGDIDLTAFGHSSDEILAKQVQAVLESEE ARKDAEFEVKDVQYIHAEVKLVKCIVQNIIVDISFNQFGGLCTLCFLEKVDQKFEKNH LFKRSIMLIKAWCYYESRILGAHHGLISTYALEILVLYIFHLFHGTLDGPLAVSSDFQ LFCSICKVLVSDTLHTLP</aaseq>

Gene Sequence

<dnaseqindica>953..1210#672..764#1..186#caggtctttccatttggatctgttccgttgaaaacttatcttcctgatggagatattgatttgactgcctttggccattcaagtgatgaaattttagcaaaacaagtacaggctgttttagaatcagaagaggcaaggaaagacgctgaatttgaagtcaaggatgtccaatatattcatgcagaggtttttctcttgatgctctttgttttttagtttatatattagttagtgtctaattcatatgcgtttatgtttctggtagtggtgtctacttatgtgtgcttatctattgtgtttattatataagatcacatgaaaccatccatgtgattcattaatacatgaattcttttcttttttcttttactccccttcttatagttgcaatcaaacatttcgcagtattcttatcctactataaaacgggaaacaacaatagagaaatccatcgtattcacatgacatcaatgaagcctgtgcatatctcaatatttcactgctagcaataaaaataaatagtcaatagtgatcaagtaaactttccaccactgtgctctattgtcatttaacaactaatgcatgcttcaacatagatttacatgttctcgcacattgttaatgtttctgatggcatcatgtttgtctaaaataagtctttctgatggcaggtcaagttggtgaaatgcattgttcaaaacatcattgtagacatctcattcaatcagtttggtggactgtgtaccctttgttttctcgagaaggtaatgtttgaaaagttgcaacaaatatgcagttgccagttctcttccttaaactgcagatctatctcggtctgatttatcacaagctaggtccgttgtacttccttgtggttcaacagttggtagatgatttctttaaggtcagactgctcaggggaaaatatatctataaccattacattttgcaggttgatcaaaaatttgaaaaaaaccaccttttcaagagaagtataatgctgataaaagcttggtgttattatgaaagccgcattcttggtgctcaccatggattaatttctacctatgcattggagatattggtgttatatattttccatctcttccatggaacattggatggtccactagctgtaagttctgacttccaactattctgcagcatttgtaaagttcttgtttctgacaccctacatacgttgccataaattactctatgttttctgcaggttctctataggtttctggactactatagcaaatttgactgggacaataagggtataagcttgtatggccctatttccttgtcttccctgcctgagctagttagtaagtggatgtggtctgatatgttacctcttttttttgtgattggaagttttcttttttcattggtcatgcaaactttattttttttcacagctgactctccagacacggttaatgatgattttactatgcgagaggactttctcaaggaatgtgcacagtggtttactgtactccctagaaactctgagaaaaatactcaggtctttccccgaaaatttttcaacatagtggacccattgaagcagagtaacaatctagggcgcagtgtcagcaaaggtttgtttcttacatctagatcatgcgttttgatggtaggattggatgattagtcttggaaatatcacaactatagtcaattttggaaaaattgatgtgtcaacttgtttgttgtaacttcacagttgttttcaaattcatcttcatcccatgattggtcactcagggaaaaatgcttgtttacttgtcaaattttagtacttatgctccagatagcttagtttttgggcatttactgtgcgtgcaaaagggataaattgtcgctgcgccccctagttcacaagctatttatccatgggccaagagattttagaacaattaagcacaaaagaaactctacgccacttaactaagcagtaacacttagtacattggatatttgcatgccagtgtatgcaacgtgcccctggaccaccttactttaataccatacatgccgcttactgacatgctgtaagttagtgattcaattgttgtttgttatatgggtatttgctcacatgcataacttccttttgctatactgcacaattgcttatgtgcattaagctgttgcagtgctatttgtttacctggcctgatcccgttgtgcaaagcacaggtaacttcctccggatacgcagtgcatttgattttggtgcccggaagcttgggaagattcttcaagtgcctgacaattttactgtggatgaagtgaatcaattcttcaggaacacattgaagagacactgcagtagggtaaggcctgatgtgcaagaaatagctctggacttcaatggtgaaagagccgacaacgatagttcgcctttatacagtaataattcctttggtgatctatctgatgagttcaataacatcagcatttcagattccagcaaccatgggtcgctaaggcaaaatggatggaattatgtggctgagaacaaggaaaggaagtctgtttctggtggctggctggcaagcaaagcaacaaatcctgcagctactaattcaactggtatgacgaatggcagtgactcttgtgagcctgcatcaccatcaattaccggagcacatagcttgccatctgaggaaggtcatgacgcactggatctctttaatgagtcagaaagtggtacgaaggctggcataaagtatgacacaaacccatcacaccatggaatgtcaacagtgagttacgcaggcagatcccaccagtcctttgaagaggtggataatgatgatagaggtaccattgatagcaattggtcagatctcaccggagactacacaacaaattttaataatcttctctatgctcaagggttccaccaagattatccaatgaaccaatattatccatttggtccagtgtactatcaaatgccttccccaccacctgcacgatatcagaataggcgatcatcaaatggtcatagcagaaataatgtgtatggatatgctggtacaaatggaataggccctgctccttgtccaccaggttatttaattatgaggacatatagtcaaatagatgattcacatcgagctcgtggaactggcacatacttccctaacccagtatgttcctcctttcacgatcttatgttcatactattaagcgtattatgcacatagaattccctgagctttgtgaaccatttaagagtctaggtttggcacaagtggtagataatccaccttctatataactcaaattgctaaggaagatgcacatttgtgaatagtattgtccttattcttttaacaagtacaactttaaacttcattttgtgtgaacttttggcactttttttcacatactatgcatatcaatgcatgaatcaataatttactattccctctgtcctaaaatatagcaacttttgaacggatgggacacatcctagtactacgaatctggacagaccccttgtccagatttgtagtactatgatgtgtcccatccattcaaaagttgctatattttgtgacagaggtactttttagtagaatttttcattgttggatttggccatatcatctatagaattggtatagagcatacccccattagttttatgtttctgctgcagagcttttttcattttgcagggttagccattatatttgtgtcattttgaggtgctatcttgtgttttgctgactttgttcaccttgttcgatttgtagaacttgtccaaagacaggtcaccttctggacgaggcggaaggggaaaaactcatttcctgtcacataaccatcaaagaccacaccactacggtagagctgatatgtcagcagatttgactccttcggaggaattgagacatatttatgatcctgatgcaaatgacttgggaatcccctcttcactgcacatatcaataccttctccatcttcggaatctccaagggaaattgtgcatggcaatggttttattcagcctccagctaagaaacttgagtttgggaccttgggagcattgcctttggaagttacatcccaagagcttggtattaacagattgaatactgcttctgacagccaaccttctgcatctgcaagccctatgtctctggcacataatcctggaattagttctaatcaaatgaggtaagtatgtttcgtttttttagctgtcagtcagcaacgtgtcaacgccaagtgtttatcagagtcatgccataactaataatttcctaaagagaaattgcggtccacatgcattttccaaaaaaatatggtatggcaatcatcagtattttcaatctaaacatgaaaagcatatttaccgaaaatgaaaatgctgttttcccctcttttccttcatattacctcattcaccttgtaacttaacctattcagttctaatgaatttttaagaaattatgttgcataattcctcattaaacaatttacaggaatgctcagccatatcatctcaaggacaacggtgatttcccaccgctatctagttgatgccatatagttcattgcatatcagaggcaacttggtccaagaaaagatactgataaatggtgcgagcacttggtgcaacaatagcaggggttattccacaagacaaacatcatccatcatgtacatcctatcattaacttcacattctcctatcttcaattcacccttgctgttgctttccaaaaaagaaagaaaaaaaaacagaaggctgatgcatcgcagcttgctctgccataacattccctgcaaaggaaatatggaggaaagatagaagcacaatgtagatacttatgttctctttacctttgtccccttgaagagggaacaagtgtggtaaagtcaaaaaatgctagaaagagggtgagctgtgtcttgctctgttgttttgacctcatgagcattccagttactggagggctcattgagtgtgctctgttttggtttggagaggccttctgttgaaaggccccattgtttgaagtaacatttgctgcctcaagcaatgggtagttataggggatagatatgtacgaaactttcactagatttactgtcttcatagaagcagtttagttagtctatactagctcagagtaaaaatgatccttttactttgcctgttgtgcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0114200, RefSeq:Os12g0114200