BGIOSGA023988

From RiceWiki
Revision as of 06:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023988| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023988, complete gene.| tag = OJ1047_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023988

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023988, complete gene.

LocusTag

OJ1047_C01.22

Ensembl Transcript ID

BGIOSGA023988-TA

Ensembl Protein ID

BGIOSGA023988-PA

Length

1253

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22056195..22057447

Sequence Coding Region

22057043..22057447,22056743..22056946,22056591..22056656,22056409..22056474,22056195..22056293

Genome Context

<gbrowseImage1> name=IndicaChromosome07:22056195..22057447 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:22056195..22057447 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCAGTTTCTTGGAGCTCATGGTGATCACTGCTTCACCTACGAGCAAATGGATGAGTCCATGGAGGCAATGGCAGCGATGTTCTTGCCTGGCCTTGACACCGACTCCAATTCTTCTTCTGGTTGTCTCAACTACGATGTGCCTCCACAATGCTGGCCTCAGCATGGCCATAGCTCTAGCGTCACCAGCTTCCCTGATCCAGCTCATAGCTATGGAAGCTTTGAGTTCCCGGTCATGGATCCGTTCCCGATCGCCGATCTCGACGCGCATTGCGCCATCCCCTACCTTACTGAGGATCTGATCAGCCCTCCACATGGCAACCATCCATCAGCAAGAGTGGAAGAAGCTACAAAGGTTGTTACACCAGTGGCTACCAAGAGGAAGTCTAGTGCTGCCATGACGGCATCAAAGAAGAGCAAGAAGGCTGGCAAAAAAGATCCTATTGGCAGCGACGAAGGCGGCAACACCTACATTGATACGCAAAGTTCTAGCAGTTGCACCTCAGAGGAAGGAAACCTGGAGGGCAACGCGAAGCCGAGCTCGAAGAAGATGGGTACTAGGGCCAACCGTGGGGCGGCAACCGATCCCCAGAGTCTCTATGCAAGGAAGAGGAGAGAGAGGATCAATGAAAGATTGAGGATCCTGCAGAACTTGGTTCCCAATGGAACAAAGGTTGACATCAGTACAATGCTGGAGGAAGCAGTGCAGTATGTCAAATTTTTGCAACTTCAGATTAAGTTGCTAAGCTCTGATGACATGTGGATGTATGCACCAATCGCTTACAATGGAGTCAACATCAGCAATATTGATCTGAACATCTCTTCCCTGCAAAAATAA</cdnaseq>

Protein Sequence

<aaseq>MAQFLGAHGDHCFTYEQMDESMEAMAAMFLPGLDTDSNSSSGCLNYDVPPQCWPQHGHSSSVTSFPDPAHSYGSFEFPVMDPFPIADLDAHCAIPYLTEDLISPPHGNHPSARVEEATKVVTPVATKRKSSAAMTASKKSKKAGKKDPIGSDEGGNTYIDTQSSSSCTSEEGNLEGNAKPSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDMWMYAPIAYNGVNISNIDLNISSLQK</aaseq>

Gene Sequence

<dnaseqindica>1..405#502..705#792..857#974..1039#1155..1253#ATGGCGCAGTTTCTTGGAGCTCATGGTGATCACTGCTTCACCTACGAGCAAATGGATGAGTCCATGGAGGCAATGGCAGCGATGTTCTTGCCTGGCCTTGACACCGACTCCAATTCTTCTTCTGGTTGTCTCAACTACGATGTGCCTCCACAATGCTGGCCTCAGCATGGCCATAGCTCTAGCGTCACCAGCTTCCCTGATCCAGCTCATAGCTATGGAAGCTTTGAGTTCCCGGTCATGGATCCGTTCCCGATCGCCGATCTCGACGCGCATTGCGCCATCCCCTACCTTACTGAGGATCTGATCAGCCCTCCACATGGCAACCATCCATCAGCAAGAGTGGAAGAAGCTACAAAGGTTGTTACACCAGTGGCTACCAAGAGGAAGTCTAGTGCTGCCATGACGGTATGCCCCTGCAAATATCTTAATAGAACAGTGATCTACTTCAGTTACCATGCTGTTTTATTTTCCATGCCTAATTGGATTGATGAACTGATACAGGCATCAAAGAAGAGCAAGAAGGCTGGCAAAAAAGATCCTATTGGCAGCGACGAAGGCGGCAACACCTACATTGATACGCAAAGTTCTAGCAGTTGCACCTCAGAGGAAGGAAACCTGGAGGGCAACGCGAAGCCGAGCTCGAAGAAGATGGGTACTAGGGCCAACCGTGGGGCGGCAACCGATCCCCAGAGTCTCTATGCAAGGGTAAGTACAAATAAAATAAAATGTGTAAAAAAAATGACAAAGTGATTCAAGGAATTCTGATGAGGTTAAATTTGTCCGTTCTACAGAAGAGGAGAGAGAGGATCAATGAAAGATTGAGGATCCTGCAGAACTTGGTTCCCAATGGAACAAAGGTAAGCTCAATATGAAACTTAACTACAGGCAATAACTAAGTTTTTGCCTCATACATTTGAGCATGATAATTGGTACAAAGAAATTTGGGTGTAACTTGATAAGTATGATCTGACAGGTTGACATCAGTACAATGCTGGAGGAAGCAGTGCAGTATGTCAAATTTTTGCAACTTCAGATTAAGGTGGGTACATTACATATCATTGTCATCTAGCCAAGGATTGTTAATAACCAAATTATTTTTCTATAAACAGTAAGTGAAATACCTTCCTAACTTTGCTGCAAACTATCATGTGCAGTTGCTAAGCTCTGATGACATGTGGATGTATGCACCAATCGCTTACAATGGAGTCAACATCAGCAATATTGATCTGAACATCTCTTCCCTGCAAAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023988