BGIOSGA023998

From RiceWiki
Revision as of 06:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023998| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023998, complete gene.| tag = OJ1113_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023998

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023998, complete gene.

LocusTag

OJ1113_E01.105-1

Ensembl Transcript ID

BGIOSGA023998-TA

Ensembl Protein ID

BGIOSGA023998-PA

Length

3071

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:21907572..21910642

Sequence Coding Region

21910393..21910642,21908922..21909134,21908657..21908826,21907926..21908196,21907572..21907843

Genome Context

<gbrowseImage1> name=IndicaChromosome07:21907572..21910642 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:21907572..21910642 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCTCCTCCGTACGCAGCCGCGGTGGTGGTGGCGACCGTCGCCGTGCTGGTGCTGGTGTCGCAGGTCTCAGTGGCCGCCGGCGCGGACTGCCGCTTCCCGGCCGTGTTCAACTTCGGCGACTCCAACTCCGACACGGGCGGGCTGTCGGCCACCTTCGGCGCCGCGCCGCCGCCCAACGGCAGGACCTTCTTCGGCATGCCCGTCGGCCGCTACTGCGACGGCCGCCTCGTCATCGACTTCATCGCTGAAAGCCTGGGACTGCCTTACCTCAGTGCGTACCTCAACTCGATAGGAAGTAACTTCACACAAGGTGCTAACTTTGCAACGGCCGGGTCGTCAATCAGAAGGCAGAACACATCTTTGTTCCTCTCTGGTTTCAGCCCCATTTCCTTGGACGTGCAGTCCTGGGAGTTTGAACAGTTCATCAACAGAAGCCAGTTCGTCTATAACAACAAAGGTGGAATCTACAGGGAGCTCCTACCCAAGGCTGAATACTTCTCTCAGGCGCTCTACACATTCGATATCGGCCAGAATGACATTACCACAGGCTTCTTCATAAACATGACCTCTGAACAAGTCATAGCTTACATCCCTGATCTAATGGAAAGGCTCACGAACATAATCCAGAATGTGTACGGTCTCGGAGGAAGGTACTTCTGGATTCACAACACGGGGCCGATCGGCTGCCTGCCTTACGCCATGGTGCACCGCCCCGACCTCGCCGTCGTCAAGGACGGGTCCGGCTGCTCCGTCGCCTACAACGAGGTCGCCCAGCTCTTCAACCAGAGGCTGAAGGAAACCGTGGGCCGCCTCCGGAAGACCCACGCCGACGCCGCGTTCACCTACGTCGACGTCTACTCCGCCAAGTACAAGCTGATCAGCGACGCCAAGAAGCTCGGGATGGATGACCCGATGCTGACGTGCTGCGGCTACGGCGGCGGGAGGTACAACTTCGACGACAGGGTCGGGTGCGGCGGGAAGGTGAAGGTGAACGGGACGTGGGTGGTGGCGGGGAAGTCGTGCGACGACCCGCTGAAGCGGGTGAGCTGGGACGGCGTGCACTTCACCGAGGCGGCGAACAAGTTCGTGTTCGACCAGATCGCCGGCGGCAAGCTCTCCGACCCGCCGGTGCCTCTCAGGCAGGCCTGCCAGATCAGCAGAGGGCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAPPPYAAAVVVATVAVLVLVSQVSVAAGADCRFPAVFNFGDSNSDTGGLSATFGAAPPPNGRTFFGMPVGRYCDGRLVIDFIAESLGLPYLSAYLNSIGSNFTQGANFATAGSSIRRQNTSLFLSGFSPISLDVQSWEFEQFINRSQFVYNNKGGIYRELLPKAEYFSQALYTFDIGQNDITTGFFINMTSEQVIAYIPDLMERLTNIIQNVYGLGGRYFWIHNTGPIGCLPYAMVHRPDLAVVKDGSGCSVAYNEVAQLFNQRLKETVGRLRKTHADAAFTYVDVYSAKYKLISDAKKLGMDDPMLTCCGYGGGRYNFDDRVGCGGKVKVNGTWVVAGKSCDDPLKRVSWDGVHFTEAANKFVFDQIAGGKLSDPPVPLRQACQISRGQ</aaseq>

Gene Sequence

<dnaseqindica>1..250#1509..1721#1817..1986#2447..2717#2800..3071#ATGGCGCCTCCTCCGTACGCAGCCGCGGTGGTGGTGGCGACCGTCGCCGTGCTGGTGCTGGTGTCGCAGGTCTCAGTGGCCGCCGGCGCGGACTGCCGCTTCCCGGCCGTGTTCAACTTCGGCGACTCCAACTCCGACACGGGCGGGCTGTCGGCCACCTTCGGCGCCGCGCCGCCGCCCAACGGCAGGACCTTCTTCGGCATGCCCGTCGGCCGCTACTGCGACGGCCGCCTCGTCATCGACTTCATCGGTACGTACGTCTCTGAATCACTGCAACCAGAGTCTTTTTCTTTCCCCTGCACGTCTTAATCAGCTAATTAACCTTCTCTCGTTCTTTCTATTATCAACTTTTCACTGCCTCTTCTTCCGCACGACTGCACGTAGGGCCCTTGAGCCTTGACTGCATATACTTGATCGAACTGAAACCTACTCCCACTCTGAACCAATAAATATCAGCTTTAATTCGTTCCATGTGTAGGTTGCAGACACGAGATGTTTCAGCGTTTGCTGCTCGAGTGTTTTAGTGTCTCGCAATGGTTAAGCCCAAATTAAAAATAAAAACGAACGTCTGAACAGGTTGTTCGATTGCTTTAGAACAAATGTCCGCAAAAGAAAGAGAAGGTCTACCATTTTCACGTACTGATTGATTGCTAGTGCTGTGATATCCGGCAAGCTGGCTACAACCAGCCAAGACCCAACCCAACAGTTCTAAAAAAAAAGAACCAACCCAACCATGGCCATAATTATTGACGAGCGGCCCGTGTGTCCGTGCCAACGATGGCATCGATTACACGGTATTATTGTTACTGCAACAAGTTGCTGCCGAGCGCCGACACGATCTCGATATATTCCCCACAATCCGACGAAAGGCCGGCCAGTAACTCGCGGCAAAGCATCTCTAGATACGGTCACGCCACTGCTATCAGCCATGCGATCCTCGCGGGGAGATTTTGTAGAGAGGATGTTGCATTGCAGCTGGGGAATATATCAGATACTCCTCCTTTATTTAGCTTTTGATACGAGAGACAGAAAGAAACATTACCTTAAGATAGTAGTTTGGTGGCCCTAAGGGGTCTTTTAGAAAGTTTTAGTGGTCGCTGGCCAGAAAAACTGGGAGACAAAACAGCCATGAGCTTATCATATATGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGGCTCTGAACCGGTTCTTGTCGTCACCAACACCACTGACAGAGACGCATGTGAAACTTATTTGAACCATTCGCCATGTACCTTAACTTTGTGATGCATGGCAGTCCGTGCTATAGCTTTGGTGCTGGTTGTAAAAGCTTCAGGCTTCAACTCACACTCTTCGGAAATCATCAAATGCAACGAGATTACTGCTATTTGAACGATCAAATGCAGATTCTTACTGTGTAAACACACACTCTTGCTCTCTGATGCTGCAGCTGAAAGCCTGGGACTGCCTTACCTCAGTGCGTACCTCAACTCGATAGGAAGTAACTTCACACAAGGTGCTAACTTTGCAACGGCCGGGTCGTCAATCAGAAGGCAGAACACATCTTTGTTCCTCTCTGGTTTCAGCCCCATTTCCTTGGACGTGCAGTCCTGGGAGTTTGAACAGTTCATCAACAGAAGCCAGTTCGTCTATAACAACAAAGGTGACAACAAAACCAAAAAATCCATTTCTGTCAGTAATTCAGTACCACGTTGAACCCAACAATCACGTTCTGTTTCGCTCCATTTCTTCACATAGGTGGAATCTACAGGGAGCTCCTACCCAAGGCTGAATACTTCTCTCAGGCGCTCTACACATTCGATATCGGCCAGAATGACATTACCACAGGCTTCTTCATAAACATGACCTCTGAACAAGTCATAGCTTACATCCCTGATCTAATGGAAAGGCTCACGAACATAATCCAGGTACAGAGATTGTACAATACTCCTACTATTTTCTTCAAAACTCAAAAGAACACCAAATTATTCTTCTCCGCTAATAACAGCAGTAGTGTAGCACATACATGCAGGGTTCTATATTGCAGAAAGAAAAAAAAACAGGGGTACCGATCGATCCTAATTTTTTGAAATTGCAGAAATTTCAGAATATTCTAGTCTGAAATAATTTGAATATTTTTCTAAAATAGTTTCCTATCGGGGGACCGAAGTTGCCAAAAAGAAAATTTCGAACTGAAATATGGAACTCTACACATATGATTGTGTTTAGATTGGCCCAAAGTTTAGAATTTGGTTGAAATTGGAGACGGTGTGACTGAAAAGTTGTGTGCGTATGAAAGGTTTGATGTGATGCAAAGTTGGAAGTTTGGAAAAAAAAAACTTTGTAACTAAACACACCCATATACATGAGCTGATTGGTAACCTGCAGAATGTGTACGGTCTCGGAGGAAGGTACTTCTGGATTCACAACACGGGGCCGATCGGCTGCCTGCCTTACGCCATGGTGCACCGCCCCGACCTCGCCGTCGTCAAGGACGGGTCCGGCTGCTCCGTCGCCTACAACGAGGTCGCCCAGCTCTTCAACCAGAGGCTGAAGGAAACCGTGGGCCGCCTCCGGAAGACCCACGCCGACGCCGCGTTCACCTACGTCGACGTCTACTCCGCCAAGTACAAGCTGATCAGCGACGCCAAGAAGCTCGGTAAAGCTTAGCTAGTTGTGCCTAGCGAGCTCGTGCAATCCCCCCCGTGCCATTGGCGTGATGTGTTGTGTTGTGGCTGCAGGGATGGATGACCCGATGCTGACGTGCTGCGGCTACGGCGGCGGGAGGTACAACTTCGACGACAGGGTCGGGTGCGGCGGGAAGGTGAAGGTGAACGGGACGTGGGTGGTGGCGGGGAAGTCGTGCGACGACCCGCTGAAGCGGGTGAGCTGGGACGGCGTGCACTTCACCGAGGCGGCGAACAAGTTCGTGTTCGACCAGATCGCCGGCGGCAAGCTCTCCGACCCGCCGGTGCCTCTCAGGCAGGCCTGCCAGATCAGCAGAGGGCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023998