Os12g0115900

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Revision as of 10:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0115900| Description = Elongation factor P/YeiP family protein| Version = NM_001072523.1 GI:115487007 GeneID:4351322| Length = 3025 bp| De...")
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Gene Name

Os12g0115900

Description

Elongation factor P/YeiP family protein

Version

NM_001072523.1 GI:115487007 GeneID:4351322

Length

3025 bp

Definition

Oryza sativa Japonica Group Os12g0115900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:775617..778641

Sequence Coding Region

775655..775781,775871..775948,776870..776976,777406..777483,777879..777980
,778155..778233,778331..778449

Expression

GEO Profiles:Os12g0115900

Genome Context

<gbrowseImage1> name=NC_008405:775617..778641 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:775617..778641 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttctctccgccacggccacctctctccctccggcgccactgcaccaccctcctccttcgcccaactccgccgcccttcctcctgcctcgccggaccacgacctctccgctctcgtctcacccgggtgtacgcgctttccagcaacgatatcagggtgggctccaacctcgaggtcgacggagctccctggaaggttcttgaatttctccatgtcaagcctggaaaaggtgctgcttttgtaaggacaaaaatgcgtaattatatcactggcaacacagttgacaaaacctttcgagctggaagtacgatcccagaggcatccatttcaaaggaaactaagcaatttacctacaaggatggagcccagtttgtgttcatggatctgactacctttgaagaaagtcgcttaaatgagtcagatgttggcgacaggcagaaatggttgaaagaaggaatggactgcaatttgttatactggaatggacggatcattgattttgatctccccatcaccgttaggctgactgtaactgatactgacccagggcaaggtgacagtgcacaaggaggaacaaaaccagcaaccgtggaaacaggagctgttgtcacagtgccctcgtttgtgaacgtaggcgatgatatcctgattgattcaagaactggccagtatatgaacagagcatag</cdnaseq>

Protein Sequence

<aaseq>MASLRHGHLSPSGATAPPSSFAQLRRPSSCLAGPRPLRSRLTRV YALSSNDIRVGSNLEVDGAPWKVLEFLHVKPGKGAAFVRTKMRNYITGNTVDKTFRAG STIPEASISKETKQFTYKDGAQFVFMDLTTFEESRLNESDVGDRQKWLKEGMDCNLLY WNGRIIDFDLPITVRLTVTDTDPGQGDSAQGGTKPATVETGAVVTVPSFVNVGDDILI DSRTGQYMNRA</aaseq>

Gene Sequence

<dnaseqindica>39..165#255..332#1254..1360#1790..1867#2263..2364#2539..2617#2715..2833#atcgtcttcatcgcatcagttgagctgccagctgagctatggcttctctccgccacggccacctctctccctccggcgccactgcaccaccctcctccttcgcccaactccgccgcccttcctcctgcctcgccggaccacgacctctccgctctcgtctcacccgtatccttccttcatcctttctgctccccctcccattgtcccaatgctgactgcctgaatactactgcttgttcctttctttcttgcaggggtgtacgcgctttccagcaacgatatcagggtgggctccaacctcgaggtcgacggagctccctggaaggttcttggttcgtaatcgtatccactcacaatctcatcttctttggcggtgtttagttcagcgcaaagtttggattttgattgaaattggagatgatgtgactgaaaagttgtgtgtgtatgacaggttgatgtgatggaaaaggactgaagtttggatccaaacgttggatctaaacacagcctttcttcctttctgctagtactaaacatacctgattcctggttggagtctcccagtggatacagtagctttgttgaacatacctcatgtagccacaaatttcattatttcaaggcacattattatctgcatatataggaccagatgggggggacgaaagctgctaccttcatttctttaacacattttaggaagaataacaactcccttttatacaactgcaatccatgttgttcataagcaatgtgacactctagtgctataaaaaacaactattttcttggttgttgcatccactgtttcagaagaattacctcctttcatacctttcagtgtgtacttgagcaaatttgcttctgttggttcgatttttcaaacttcacatatagcttagcttgccacaatatgtgaatgttatttgctttcccaagtattccctgcttttcagatcactcactgctatgtttctttcagttgctagaatggaatggtaaagcatactctagtacctataaaaggagctttaagagttccatttgttacgtttgatttaaataaaattatgtgtttttcaataaattccagacgaatctatatctgtgaaaaaacaaatgttgaaatgtcatagagtattctgacagatgtatatcatttcttgccatctattgctcatctattccattttactttagatgctcgatataagaaatatcatataaaactttctgtcttcatgcaacaacagaatttctccatgtcaagcctggaaaaggtgctgcttttgtaaggacaaaaatgcgtaattatatcactggcaacacagttgacaaaacctttcgagctggaagtacggtaatccaagcagaaactcacctttctaaacctgtagaaattactccctccgtttcaggttataagacgttttgactttggtcaaagttaaactgctttaagttttaccaagtttgtagaaaaaagtagtaaaattttcaacccaagacaaatttattatgaaaatatattcaattattgatttgatgaaactaatttagtattatcaatattactatatttgtctataaatttagtcaaacttaaaacagtttgactttggccaaaatcaaaacgtcttataatctggaacggagggagtaccattctgtgactgtatcagatcatgctttagcttatgtaataaaaaacaactgatatgatactcatcaactctccttcaatgtgttctaacaaagaagagcacttattttgtcacttttgttttagatcccagaggcatccatttcaaaggaaactaagcaatttacctacaaggatggagcccagtttgtgttcatggatctggtacatgtttcagtttttcattcaaacatatcatgaaaagagtagtcgctagctgtctgtatgcttcagtaatcagtatgcaatggaacacccatgtttgaaatttaagcacgtgctaaccatatggtatatggtactatagaaacatatgaattgaactcgctgatttctacaatgtagaaactactggtagaagtatcgtttaaagttttacggacagtcggaagttttacagacagacagtcaagttttagaaacatatgaattaaacttgccgattccttttgtttgcagcaaactgctgccaacaaagaaggcaaagagaatgaatggttcttttatggtgtgttccccaagtgcataatgttacttatctttataattttcctttccagactacctttgaagaaagtcgcttaaatgagtcagatgttggcgacaggcagaaatggttgaaagaaggaatggactgcaatttgttatactggaatggacgggtatttcctgttttgtttttacataatctgctgtccaaatccaatcaattaattggctgttgtcagttcatatgttcctattttgtttcaaactcttgataatgtgctgtttgattagttatgtattcttgcacagaataggatattggtcactgacattaatatgtcctgcagatcattgattttgatctccccatcaccgttaggctgactgtaactgatactgacccagggcaaggtgacagtgcacaaggtataactgcatgtgaatatcacaattagaaaaaaaatgttttcttattaaagctgacacgatcagaataataatcttttaactgtatattttgtaggaggaacaaaaccagcaaccgtggaaacaggagctgttgtcacagtgccctcgtttgtgaacgtaggcgatgatatcctgattgattcaagaactggccagtatatgaacagagcatagaagagatgagagactagacatcaacagagcattagtttttgtctccccatttttggcccattccctcacctcacccaggtttgactgtattgtttacagcatttgaaccctcgacaggatcaaaatgctttctcaaatttttgtactgcatatgtgcgtacatatttcaccagagcagatgattaatgagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0115900, RefSeq:Os12g0115900