BGIOSGA024040

From RiceWiki
Revision as of 06:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024040| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024040, complete gene.| tag = OJ1699_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA024040

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024040, complete gene.

LocusTag

OJ1699_E05.22-2

Ensembl Transcript ID

BGIOSGA024040-TA

Ensembl Protein ID

BGIOSGA024040-PA

Length

4372

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:21246739..21251110

Sequence Coding Region

21250913..21251110,21250714..21250779,21249764..21249850,21249578..21249676,21249172..21249267
,21248982..21249047,21248804..21248894,21248489..21248556,21248325..21248390
,21247427..21247477,21246952..21247016,21246739..21246805

Genome Context

<gbrowseImage1> name=IndicaChromosome07:21246739..21251110 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:21246739..21251110 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCCCTTGCTGCTCACGCCGGCCGCGCGGCTCGCGGCCGCGGCCCCGTCAACGCTCTCGCGGCTGCTCCGCCTACAAAGCGGTCGCCACCATGCGCACGCCTCCTCCTCCTCCAACCGCCTATTGCCCCCTCTCCTCCGTCCTCCTCGCGACGGTTTCCGCGGCGGCCGCCTCATCGCCTCCTCCTCCTCTCAGATGGCGGCGCCTGCCGATGCACCGGGCGGATCCGCGGACGCGTTCGAGGTGATCCGCGCTCACCAGGAAAAAGCTGCTCGACTTCCTCCGGTTGAAGAAATACGGACCATTCTGGACCAAAGTGTTAGGGGTGTCCTTGCCACCCATTCTCAGGGTCATGTTGGCTATCCGTCTGGTTCAATGGTTGATTTTGCATGTGATCAGGATGGTTCCCCCATATTAGCAGTTAGTAGTTTAGCAATTCACTCAAAGAATCTCTCTGAAAATCCTAAATGCTCGCTTCTGGTTGCCAAAGACCCTGAGGACAGAACAGATACTGTGATTACTGTATATGGTGATGCCACACCTGTTTCAGACCAAGAAAAAGATGCAGTACGAAGTGCATACTTACGAAGACATCCTGAGGCATTTTGGGTTGATTTTGGTGACTTCCGTTTTCTGCACATCAAGCCAAAAGCCGTGCGATATGTGTCTGGGGTTGCAACTGCCATCCTTGGTTCTGGAGAATTCAGTGCTGCTGAGTTCAAGGAGGCAAAAGTGGACCCAATATCTCAATTCTCAACCCCTATTACGAGCCACATGAATAAGGATCATTCTGATGATACAAAGCTCATTGTGCAATACTCAACCACTGTCAAGGTGGACTTTGCTTACATGCTTGATGTGGATAGTCTTGGTTTCAATGTGAAGGCGGGCTATGATGGAAGTGTTCTGAAGCTGCGTATCCCCTTCCCTAGGCGTGCACAGGACAGGAAGGATGTTAAGACACTTATTGTGGAAATGCTCCAAGCTGCAAAAGCCTCATCGTCTTCTGCTGAATGA</cdnaseq>

Protein Sequence

<aaseq>MKPLLLTPAARLAAAAPSTLSRLLRLQSGRHHAHASSSSNRLLPPLLRPPRDGFRGGRLIASSSSQMAAPADAPGGSADAFEVIRAHQEKAARLPPVEEIRTILDQSVRGVLATHSQGHVGYPSGSMVDFACDQDGSPILAVSSLAIHSKNLSENPKCSLLVAKDPEDRTDTVITVYGDATPVSDQEKDAVRSAYLRRHPEAFWVDFGDFRFLHIKPKAVRYVSGVATAILGSGEFSAAEFKEAKVDPISQFSTPITSHMNKDHSDDTKLIVQYSTTVKVDFAYMLDVDSLGFNVKAGYDGSVLKLRIPFPRRAQDRKDVKTLIVEMLQAAKASSSSAE</aaseq>

Gene Sequence

<dnaseqindica>1..198#332..397#1261..1347#1435..1533#1844..1939#2064..2129#2217..2307#2555..2622#2721..2786#3634..3684#4095..4159#4306..4372#ATGAAGCCCTTGCTGCTCACGCCGGCCGCGCGGCTCGCGGCCGCGGCCCCGTCAACGCTCTCGCGGCTGCTCCGCCTACAAAGCGGTCGCCACCATGCGCACGCCTCCTCCTCCTCCAACCGCCTATTGCCCCCTCTCCTCCGTCCTCCTCGCGACGGTTTCCGCGGCGGCCGCCTCATCGCCTCCTCCTCCTCTCAGGTCTGGCTTGCGCGCCCCAGCTCTTGTTTGGCCTGTCTTGTGGGGGTGGTTGCGGACCAGGTGTTCGACGGAATGCCCCCGAGGTGAATATGGCTGTGACTCTGGCTGATGCCGCTTTTTCCCTGCGTTGCAGATGGCGGCGCCTGCCGATGCACCGGGCGGATCCGCGGACGCGTTCGAGGTGATCCGCGCTCACCAGGTGCGGCCCTTAGCATCGTGATCGCCCTTTTATTCCTTGGACACCTCACTCCTTGTTTGTGATGTCCCCAAGGAGCGAGGAACCTAACCAGGCAGTAGCTTATGCAACTAGGGGTGAAAACGATTGGAAACGGTTGGAATCGCTAGCATCTCTTCGGAAACGATGCTTGATCGGCCGGTAATTGACCATATTTATCATTTAAATTACACAGTATCGACATTAATATGATGCAGAAAGAAATTAGGAAAAAATAAAATTTAAAAATAGCCAAAAACGGTACGGTCGGAAACAGTACTCTTAAACGGAAACGGCGCCCGGTCGATCGGTAATTTCTGTGACCGTTTTCACCCCTATATGCAACATACAAAAAACACAAATTGACTTGTTCTGGGTCAGTAGTGTCCCGGAGATTCCACAAATTTAGGACAACGTGCCTGGTAAATGTACAAATGTAATACAGTCAGTTTCTTTTTAAGAAGTCAAACGTCAAATATATTCCCAGGAAGGATTAGTTATGGTATTGTGAAACAGGGTTGGAGGCTGTCTGCTACTCTGCTGTGTGTGAATGTTTCAACAAATTAATGTTGCAACAAGTAGGCATCGCATCAATAATTAACAATTACATGAAGAAGTTTCCATAACAAGAATTAGACCTACAGAGAACCAATTGTTTACTAGCCACAACACCACCAACTGAGCTTTTGCAAACCTTTCCCTTGTCAATTCCTGCAAGAGTCTGAGCAATCAACTTGCGGAACAAGTGTGGAACTGTCAGAAGGGAAACCTTCAACTTCAATGATCTATCTTTTAGTTTTTATCATTTCTCGATGGTCCATACTCAAACAAGATTTTNGTTATCGTAGGAAAAAGCTGCTCGACTTCCTCCGGTTGAAGAAATACGGACCATTCTGGACCAAAGTGTTAGGGGTGTCCTTGCCACCCATTCTCAGGTATTCTGTAGACTAATGAGTAGTGGTTGTATTGCCATGTACAGGGCAATCCTCAAGAGCATGGAATAACATGCTATTTTGTTACAGGGTCATGTTGGCTATCCGTCTGGTTCAATGGTTGATTTTGCATGTGATCAGGATGGTTCCCCCATATTAGCAGTTAGTAGTTTAGCAATTCACTCAAAGGTAAGATATAATTCGCTTTTATGATCTTGAATACATGATAAAACTATATACTCACTGTTTCCCATGCATGGATATCCCTGTACATACACACAATAACGCTATTTACTACATTGGCATAGATGTTTGGACATGCAAAGTAAATAACTAAATATGCATACAGATGTAAAATGCATGACCACTAGCAGTGATATGAAAATAGTACTGCAACTCTACATTCACCACCAGTCCAGCTGGAAAATTTTTCATTGTCATGTTTTTCCTTTGATGCAAGCTTCTTGGATTCTGATACTTTTTTTTTTTTTTTTTGCAGAATCTCTCTGAAAATCCTAAATGCTCGCTTCTGGTTGCCAAAGACCCTGAGGACAGAACAGATACTGTGATTACTGTATATGGTGATGCCACACCTGTAATGCTCCAGATACTGGCCTGCCTATACCCTTGATTCTTTTCTGTATGACACTTTCCTATATCATATTGTTCATGTTACGTAACAAATATAGATCTGTTGGTCTTTGTATTATGTTTGAAAGGTTTCAGACCAAGAAAAAGATGCAGTACGAAGTGCATACTTACGAAGACATCCTGAGGCATTTTGGGTATGCTATGTGGACAATTTTATTATTTTGGAAGCACATGTTGTTTTATGAAGTACTGATTTCTGATGAAAAAAAATGCCAAATAAGGTTGATTTTGGTGACTTCCGTTTTCTGCACATCAAGCCAAAAGCCGTGCGATATGTGTCTGGGGTTGCAACTGCCATCCTTGGTTCTGGAGGTATGTTGCCTTCTTCATTGCCCTAGTTGAGCCACTGTTTGAAAAGTGAAGGTTATCCTTTATAAGAACCAGGTTTCAGGGTTCGATATCTAATCAACCTTTTATTTGCTCATTTATTTGTGAATGCTGAGTAGCCATGCTCCTCTATTGTGTTTCCACTTCTAGTATTTGTACAAGAATAGAAACCATGACAAATGGTTTGATGATAATGGTGCCTGATTTTAATGCTATTGTGAAACATCCCCAGAATTCAGTGCTGCTGAGTTCAAGGAGGCAAAAGTGGACCCAATATCTCAATTCTCAACCCCTATTACGGTGTGTCCACATTCTGTTTCCTTTTTCCATCAATAAGGGGCATCACCGTAGATATGTCAATCGTTAGTGTAATTATGTTAAATTTTAATTCCATGCAGAGCCACATGAATAAGGATCATTCTGATGATACAAAGCTCATTGTGCAATACTCAACCACTGTCAAGGCAAGTAAACAAGAAAATTTATGTACAGTTTTTAGTCACAAATGTTATTTGGCATAAAATTTTAGGCAAATCACATTTGCTGAGCTATTGTTCCGCAACTAACTATTTAAGTTATTACTGAATGGCATGTATTCAGTCATCTTGGTGTGTTTAGTTTGGGAAAAGGAAAACACTCTTGGGTTCAAACATACTGTTGCTGTTTTTTTTAGGGAAGACCTACTCCGTAACTGAGAAACCATGGCTAGCTGATGTAGGATGGATTCACAAGAGTGCTGTCTATAACCTCACCCAGAAGTTCCTCAAGTTAAGCGCGACCTGATGACCTGATGTCCTGAACCCACACGACCACACCCTATCACCTATCCTGGTGTTGCACAATGATCAGATTTAGCAATGCATAGCCACACAACTAGATGCTCTCAATTTTTCATGGGAATGGAAGCCAGGGAGGAGTTGAGAGTTGAGGGGGTTGATTACCCAGTTCTGTAGTTTGGGTCCAACAAATTTGTACCATTTATTTTGTAGCCTAGCTGATATTTTTGTGTATCCAGTTTATTGTTAGCAACAAGAACTATAATTCTATAGCATGCACATGATGTGCACACTTTTGCCAGCAAGGCCTGTAAACATCACTTTGCCAGTACTCTTGAACCATATCCAGATCACAATAGTGTGGAGTAGTGGAACAGGAGCCTGTCTTATTTTCCCCCCCAAAACACACCTATTTATGCTTTATGTTACTCTTATCTGTTGTCTTTTTAGTTTATACACTATTATACCTTATATATTAGACAGAATGTTCTTTTTTTTTTCTATGTACTGTGTTGAAAAAGATAAACCATCTCAGGTGGACTTTGCTTACATGCTTGATGTGGATAGTCTTGGTTTCAATGTGAAGGTAACTCTTTAAATTCCTTGTCCTACTCTTATACTATATGAAATTACATAGATGTTATGCTGGAATGCTGCAAGCCTGCAACCAAAGAACCAAATATATGAAATACTGATGTTACATTTGATACAATGATAACAATGCTTCAACGACGAACAATCAACAAAGCAATAAGATTTAGAACTTGATAAGATTCTGAAAGCAAAGGTTATGCTTCCTGAATCCTGATAGCATTACAGTTTAAGGAAAGAATACCTATAGATACCTTGAATTTTGGAGCCCCTCATTGGCTTTATAACGACACACTTAGTTCTATACATCTTTGAACATATCTCGTTGAACCTTAATGTGCTGCAGTGTCCACTCAATCAAAAGCCAACCTTGAACTTCTAATATAAGCTTTTGCATTTGTCCAGGCGGGCTATGATGGAAGTGTTCTGAAGCTGCGTATCCCCTTCCCTAGGCGTGCACAGGACAGGAAGTGAGTCCCCGCAGTCCTGCACTGCGTTCTCTTAAGCCTTTTATCTAAACGTCCGAATGATACTTTATAATTAATGTCTATGATATGATTATTTCAAATATAGATATCTTGATACTGACTACATTGTTTTTTCTGTTCTTTTATAGGGATGTTAAGACACTTATTGTGGAAATGCTCCAAGCTGCAAAAGCCTCATCGTCTTCTGCTGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024040