Os12g0116600

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Revision as of 10:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0116600| Description = Similar to Transcription factor (Fragment)| Version = NM_001072527.1 GI:115487015 GeneID:4351327| Length = 3409 bp| ...")
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Gene Name

Os12g0116600

Description

Similar to Transcription factor (Fragment)

Version

NM_001072527.1 GI:115487015 GeneID:4351327

Length

3409 bp

Definition

Oryza sativa Japonica Group Os12g0116600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:816004..819412

Sequence Coding Region

816185..816602,816710..816817,816910..817037

Expression

GEO Profiles:Os12g0116600

Genome Context

<gbrowseImage1> name=NC_008405:816004..819412 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:816004..819412 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctagaacttggtggagacactaacaagctgaccaatcttgttggaggtaagagaaaaggtgacaagcatatcatggacaaccacaacttggaggaggaagccaaagaaagtgttagcaagagaagaaagaatgcagaacacacaggttcaactgtggctcaagcacctcacaatgatggacatcaatggaggaagtatggtcagaaatggatctctagagcaaaacattccaggagctactacaggtgtgccaatagtaaagtgcaaggctgtcctgcaacaaagacagtgcaacaaatggattccagtggaaatggaacatcaaagttgttcaacgttgactactatggccaacacacatgcaggggagatggcatagccaatccatatgttgtcgacacagcccatcacagtatggaacctatcaatcaaaacgaatgcaatagccctacacttgaacacgaagcccatgaagttcaagatgaaagatttgaaaacttgtgtatggtacaaaatatgccagagtatttgatagattttgaattggagagagccttcgagtttattgtgaactcaccattgggttctgagcattggacgttcgatgattcaataagatgtgagcacagtccaatatgcatatggggatga</cdnaseq>

Protein Sequence

<aaseq>MLELGGDTNKLTNLVGGKRKGDKHIMDNHNLEEEAKESVSKRRK NAEHTGSTVAQAPHNDGHQWRKYGQKWISRAKHSRSYYRCANSKVQGCPATKTVQQMD SSGNGTSKLFNVDYYGQHTCRGDGIANPYVVDTAHHSMEPINQNECNSPTLEHEAHEV QDERFENLCMVQNMPEYLIDFELERAFEFIVNSPLGSEHWTFDDSIRCEHSPICIWG</aaseq>

Gene Sequence

<dnaseqindica>2811..3228#2596..2703#2376..2503#cctagctcagtatatgggtcatccactggaccattcaattcaagaatgaagaaataatcgatcccatcaactaaacctaacaattaatatataggtaatattcaggttctgatagtgattcaatggacccggctggacatcgatcataccatcatatatggaaagaaatttataaaactgtcaaattggattgaggattttgggcatgtggcttatgcaaggcagcgtcaccatgtctttgtgatagtactgtattagtgtctggattccttgggccaccttttttttgagagataggggctcttctcaatctgggctacgcaggaaacatctagcccgaaactatagatatgccccttggactggtttagttgcaaccttaaccttaaccttaaccttgttcaattttgttgacagatcctctgccgctctgaacccctgaacataactacataatgtttataactctttgagaaaatttgattctatcattgatgataggagatcgatttcacacatatttcacaactacaacatggtgagcaattttcttctataaacaccaagactgtaacatcgatatcgacttttcagttgaattatcaagctagaattcagaatttcagaagccaaagaggaaacagaacatgccgaaccttaggcggacagaacgaagcggcagaacaccttgactgtgtatgtttgtcgccgaccggctgctcagaacacaacaggaaacaaaaaatggcacggtactggagtacatccatccgggcgtgctgtcaaactgaacataaggtattggcgtgttccttcttgactcgcacggtcacgccatgtttttgatggagtaaaacatcccggtcactaaattcaaataaggaaaagatattgttactataatttattacaagttctccatacaagcagaatagcaaaagataaagccatagctggattgaatttccccttttatattttttccccttcttagatggttggcttggacagatattacgagaagatctgccattgctctatagcttgattaaagttaatattggcacaattaatcaaggctaagatacacgttactttgctccacaagattattccaacagattcaccaagctagtaataatccactcgatccagattaccagataggtgttttaattggaaagaacaaacatgcttgagttaaactaaaattgaacctgctggccagccggttggaacaattgattgcgttccattggagtcaaagcaagcatgtccctattcagggaccagtaacgagggacaatttgtggtccccatatatcttctctctacaaccaccagaaaaccagagcaattttttgcatccacatatgatgtggaatgaagcagctgctcgcacatttatattatggtaactaggtctgtcagccaacaatcacaggaatcattgctagccacaagtcaccccatccatatcctcctgatcatcaagtacaaacagaaacgtttttcacctatcagttatggttggatgttgtaatttcatacacagatattttttttaatgatatgctcaagttcttgataaatcgctttttttcttgggctgggtccgctgggatttatgtttacaattgtttatacacctcttcacagtgataatatgctaaatactccatagaataaaatataatagacatgcaatctcaatgggattatagtcacctaatatacaatacaaattttctttgttccagaaaagggaaatttgtttgttcctctactcgattacgatgttcctggagtaattttctccaaacttcttttaggatgaagttctgagcaaaaacttaaccttttaggtactttcactaataaaagaaaacactgatgcaggctctgacgtaagatatatgtaactcaggagagacatcctagaatagaacccatttttgcaattttttagagttacatctgtctctcagtcataaaattgtactggtatttgataatgacctcacttcgctagacttttgttgtgagaacatttgaacaatctcaattcctcccatcatggtgctgctgcttgctaccggtataaatatatgcctaaagctgcagttagctaacaccttctgccctgactatcatagccacatctccataatagacaaactcataagatgaaaattctcgaatcttttggtcatagtgactgtcaagtagtgatcaacatgatagagcaccaaaaggctctcatggtggagctgcgtggcatggtcatgccaatacttccgagcgacaatgaacaagccaagcttgctctttaactcttgggagatatattaagttgctcagataaggctatctccatgctagaacttggtggagacactaacaagctgaccaatcttgttggaggtaagagaaaaggtgacaagcatatcatggacaaccacaacttggaggaggaagccaaagaaagtgttagcaagagaaggtatatgtatatattacatgccactagaggaatgcccactagcttatcattcattgctaacgaaatttgattgatcctcttgattatgatagaaagaatgcagaacacacaggttcaactgtggctcaagcacctcacaatgatggacatcaatggaggaagtatggtcagaaatggatctctagagcaaaacattccaggtataaatgagcatatgaactcctgtttatttccattcctcgaagcatattgattttatctaacagaaaaaaatatatacatctaatgagctcattttcttaagcaggagctactacaggtgtgccaatagtaaagtgcaaggctgtcctgcaacaaagacagtgcaacaaatggattccagtggaaatggaacatcaaagttgttcaacgttgactactatggccaacacacatgcaggggagatggcatagccaatccatatgttgtcgacacagcccatcacagtatggaacctatcaatcaaaacgaatgcaatagccctacacttgaacacgaagcccatgaagttcaagatgaaagatttgaaaacttgtgtatggtacaaaatatgccagagtatttgatagattttgaattggagagagccttcgagtttattgtgaactcaccattgggttctgagcattggacgttcgatgattcaataagatgtgagcacagtccaatatgcatatggggatgatgacttgatgttagctataagctagctaggagtttctttcaggatgtgctgtaatgataagttgtgacctggtaaaaatacatagcattttgctcatgactaagaagtaaacctgaaattaagaagcatgtgtataagctattattatactattataaaaattgaagatgtttccgcggtc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0116600, RefSeq:Os12g0116600