BGIOSGA024066

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Revision as of 06:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024066| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024066, complete gene.| tag = OJ1092_...")
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Gene Name

BGIOSGA024066

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024066, complete gene.

LocusTag

OJ1092_A07.123

Ensembl Transcript ID

BGIOSGA024066-TA

Ensembl Protein ID

BGIOSGA024066-PA

Length

3961

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:20856646..20860606

Sequence Coding Region

20860578..20860606,20859232..20860270,20858151..20858669,20857195..20857383,20856990..20857126
,20856646..20856883

Genome Context

<gbrowseImage1> name=IndicaChromosome07:20856646..20860606 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:20856646..20860606 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGTCGAAATACCACGCTTTCCTCAGAATATCTGAGGAGGTTGTTGAGGCAGAACAAGAATTAATTGAGTTGCAGAAGCATGTGTCTGCCCAGGGGATTCTTGTGCAAGATCTAATGAGCGGTGTGTGCCGTGAACTCGAAATGTGGCAAAAACATTGCAAGGATGAACATGTGGAAGAGAAAGACCTTCAAACAGAACTTGATGAAATTTTGTCATATGATACCCAAGATTCCAAGGTTAGTTTTCTGGATAAATTAGATACTTTGCTCACGGAGCACAAAATAGAGGAGGCATTGCTTGCTTTGGAAACCGAAGAGAAGAAATGTATGGCTACGGATGATCCTGGCAAAGAATTAGATGCAGAGATTTCTACCTATAAGACAGCACTATCTAAAAGGAAATCAATTCTTGAGGATCAGCTTGTTAGGTATTCAGAACAGCCTTCTTTATCTATTACCGAGCTAAGGAAATCTTTGTCTGGCCTTATTAAGATTGGCAAAGGTTCTCTAGCCCACCAAGTACTTCTAAAAGCTTATGGGTCACGTCTTCAGAAAAATGTTGAAGCATTTCTTCCAACATGTTCGATCTACACAGAAACTTACTCTGCAACTTTGTCAAAGATTGTTTTCTCAGCTATCTCAAAGGTATCCAAAGAATCTAGTTCGCTATTTGGGGATAGCCCCATGAATTTGAACCGGATTATTCAGTGGGCTGAATATGAAATAGAAACCTTTGCGCGTTTGGTTAAGGAAAATTCTCCTTTGCCTGAGAGCGTATCTGCCCTTCGTTCTGCCTGCATATGCATCCAAACTAGTCTCACTCACTGCTCTTATCTAGAATCATATGGCCTGAAATTCTCAAATTTACTAATGGTACTATTGCACCCCTATGTTGAAGAAGTGCTTGAGCTGAATTTTAGAAGGCTGAGAAGAAAGATTGTAGATTCAGCAAAAAATGATGATATTCTGCTTCCCAGCCCTCAAGAAGGATCACGGCTCTCTAGTTCAGTTGCACCAAATATAATGCTTACAAGCAGTGGAAAGAAGTTCATGTCCATTGTCAATGATGTTTTGGATCAAATTACCCCAATGACTATAGTTCACTTTGGAGGAACGATTTTGAATAAATTTGTCCAGCTATTTGATAAATATGTTGAAGCACTAATTGAAGTCTTACCAGGAGCTTCTGAGGATGATCATCTAGTGGAGTCAAAAGAGCCTATAGAATTTAAAGCAGAGAGTGATGCCCAGCAGATTCAACTCATTGGAACAGCATACACTGTAGCAGATGAATTATTGCCAGCAGCTGTATCCAAATTTTTTGATATCCAAACCGAGAAGAAGAGAATTGGTGGAACAGGCGAGGGCCTTGGCTCTGGATCTATATACTCCATAGAATACAAAGAGTGGAAACGTAGTCTGCAACATTCACTGGACAAACTGAGGGATCATTTTTGCCTACAGTATGTCTTGTCATTTATTTACTTAGAAGGGAAATCACGACTGGATGCTAGAATGTACTTGGAGCTGAAAACTGATGATCTTCTTTGGGAGTGTGATCCTTCACCTTCTCTGCCTTTCCAGGCGCTGTTTGTAAAGTTACGGCAGCTAGCTAGTGTTGCTGGTGATGTCTTACTGGGTAAAGAGAAGATACAGAAGGTCTTGCTCTCAAGGCTAACTGAAACGGTTGTCATGTGGCTCTCCAATGAACAGGAATTCTGGGATGTTTTCGAGGATCAATCCATCCAACTCCGGCCTTCAGGACTACAGCAGCTTATTCTTGATATGCACTTCGTCGTTGAGATTGCTGTCTGTGGGCGGTATCCACACAGACCTGTTCAGCAGCTTGTGTCGGTAATCATAACTAGGGCAATCGCAGCTTTCTCAGTGAGAAATGTTGACCCACAAAGTTCTCTACCCGAGGATGAATGGTTCCTCGACATGGCCAAGGTTGCAATTAATAAGCAATTAGGGACTTCAGGATCTGAGTCCGAGCTTGAGGAGCCTGTGGTTGTACATGATGAAATCTCGGATTCTGAAGAGAGTAGTATTTCAAGTCCATCGACGATAGGATCTGAAGATTCATTTGCTTCTGCAAACAATGATGATCTAGAAACTCCTGTATATTTCACGGATCCCGAGGCATAA</cdnaseq>

Protein Sequence

<aaseq>MQSKYHAFLRISEEVVEAEQELIELQKHVSAQGILVQDLMSGVCRELEMWQKHCKDEHVEEKDLQTELDEILSYDTQDSKVSFLDKLDTLLTEHKIEEALLALETEEKKCMATDDPGKELDAEISTYKTALSKRKSILEDQLVRYSEQPSLSITELRKSLSGLIKIGKGSLAHQVLLKAYGSRLQKNVEAFLPTCSIYTETYSATLSKIVFSAISKVSKESSSLFGDSPMNLNRIIQWAEYEIETFARLVKENSPLPESVSALRSACICIQTSLTHCSYLESYGLKFSNLLMVLLHPYVEEVLELNFRRLRRKIVDSAKNDDILLPSPQEGSRLSSSVAPNIMLTSSGKKFMSIVNDVLDQITPMTIVHFGGTILNKFVQLFDKYVEALIEVLPGASEDDHLVESKEPIEFKAESDAQQIQLIGTAYTVADELLPAAVSKFFDIQTEKKRIGGTGEGLGSGSIYSIEYKEWKRSLQHSLDKLRDHFCLQYVLSFIYLEGKSRLDARMYLELKTDDLLWECDPSPSLPFQALFVKLRQLASVAGDVLLGKEKIQKVLLSRLTETVVMWLSNEQEFWDVFEDQSIQLRPSGLQQLILDMHFVVEIAVCGRYPHRPVQQLVSVIITRAIAAFSVRNVDPQSSLPEDEWFLDMAKVAINKQLGTSGSESELEEPVVVHDEISDSEESSISSPSTIGSEDSFASANNDDLETPVYFTDPEA</aaseq>

Gene Sequence

<dnaseqindica>1..29#337..1375#1938..2456#3224..3412#3481..3617#3724..3961#ATGCAGTCGAAATACCACGCTTTCCTCAGGTTAATGTTAATTACTGATCGATTCATTCCCTTCTGATATTAGAGAGAATGTTGTCTCTATGGATCCTTCCCTTTATATTCTTGTTGGTCGTTTATTCTTTACTAAGTCTTGTTGCTGAAACGTACAAGTTAACCTTTTCCCAAGTTCATCAATGTTTTTGTTAACGCACAATTCAGCTTTTATCTTTGAGTCGCTATAAATTTAGAAAGTAATATATAATGTTTAGCGTTTCTTCCTACTTCCTTGCACTCATTTGCTGTTTTTAATCTACCGCAATGTTTTCTGGTGTTTGTTTTCTTCATGCAGAATATCTGAGGAGGTTGTTGAGGCAGAACAAGAATTAATTGAGTTGCAGAAGCATGTGTCTGCCCAGGGGATTCTTGTGCAAGATCTAATGAGCGGTGTGTGCCGTGAACTCGAAATGTGGCAAAAACATTGCAAGGATGAACATGTGGAAGAGAAAGACCTTCAAACAGAACTTGATGAAATTTTGTCATATGATACCCAAGATTCCAAGGTTAGTTTTCTGGATAAATTAGATACTTTGCTCACGGAGCACAAAATAGAGGAGGCATTGCTTGCTTTGGAAACCGAAGAGAAGAAATGTATGGCTACGGATGATCCTGGCAAAGAATTAGATGCAGAGATTTCTACCTATAAGACAGCACTATCTAAAAGGAAATCAATTCTTGAGGATCAGCTTGTTAGGTATTCAGAACAGCCTTCTTTATCTATTACCGAGCTAAGGAAATCTTTGTCTGGCCTTATTAAGATTGGCAAAGGTTCTCTAGCCCACCAAGTACTTCTAAAAGCTTATGGGTCACGTCTTCAGAAAAATGTTGAAGCATTTCTTCCAACATGTTCGATCTACACAGAAACTTACTCTGCAACTTTGTCAAAGATTGTTTTCTCAGCTATCTCAAAGGTATCCAAAGAATCTAGTTCGCTATTTGGGGATAGCCCCATGAATTTGAACCGGATTATTCAGTGGGCTGAATATGAAATAGAAACCTTTGCGCGTTTGGTTAAGGAAAATTCTCCTTTGCCTGAGAGCGTATCTGCCCTTCGTTCTGCCTGCATATGCATCCAAACTAGTCTCACTCACTGCTCTTATCTAGAATCATATGGCCTGAAATTCTCAAATTTACTAATGGTACTATTGCACCCCTATGTTGAAGAAGTGCTTGAGCTGAATTTTAGAAGGCTGAGAAGAAAGATTGTAGATTCAGCAAAAAATGATGATATTCTGCTTCCCAGCCCTCAAGAAGGATCACGGCTCTCTAGTTCAGTTGCACCAAATATAATGCTTACAAGCAGTGGAAAGAAGTTCATGTCCATTGTCAATGTGAGTTCCTGTTTTATTCTTTTTACTGGATTTTCCTTATTACAACCTTTTTTCTTAATGTGTCTGACAATTCAGTTTTCTGTTGTGTTCAACTGGACAATATTATTAAGTAATTGAATGATCCTGTCACTAAACTCGATATGTATTAAATCCAATGCATTCTCATTTTAAGATACACATGATTTCCTGGTTTCTAGCACTATAGCAGCAGTTCTTTTTGTTGGTATGGGTTTCTAGCACCACTTGAAAACCTTGTTAAAATTACACCTGGATTAATGTACGCCGTTGCTTTATGTTATTTACTTGGTAGAAAGCAACCAAAGATACATGTAACATCTCCCTGCGCCCACATACATATGATAAATATATGTGGCCCACTAGCATTAGTTAGTGCAGGCACCAAAATACTATAGCCTATTACAGAAATTTGGAAATGAAACACTTTTATGGAATGAATGGAAATTAGAACAGCGTGCAGTTCATCGAGTTGCTTTAGAATTTAATGTACACCACCTGTTGTCTATATTATGAAGCAGCTGATCTCTGTATCTGCTTCTTTCAGGATGTTTTGGATCAAATTACCCCAATGACTATAGTTCACTTTGGAGGAACGATTTTGAATAAATTTGTCCAGCTATTTGATAAATATGTTGAAGCACTAATTGAAGTCTTACCAGGAGCTTCTGAGGATGATCATCTAGTGGAGTCAAAAGAGCCTATAGAATTTAAAGCAGAGAGTGATGCCCAGCAGATTCAACTCATTGGAACAGCATACACTGTAGCAGATGAATTATTGCCAGCAGCTGTATCCAAATTTTTTGATATCCAAACCGAGAAGAAGAGAATTGGTGGAACAGGCGAGGGCCTTGGCTCTGGATCTATATACTCCATAGAATACAAAGAGTGGAAACGTAGTCTGCAACATTCACTGGACAAACTGAGGGATCATTTTTGCCTACAGTATGTCTTGTCATTTATTTACTTAGAAGGGAAATCACGACTGGATGCTAGAATGTACTTGGAGCTGAAAACTGATGATCTTCTTTGGGAGTGTGATCCTTCACCTTCTCTGCCTTTCCAGGTGATTCCATTTCAATGATGTGATATCAGTTTTTTGCATCGATCGTGTTAAAAGCTCAAAATGATTTCTTGTCACCATGAAAAAACCACGGCATTGCAGTTCACAGGTCTATATTAAAACAATCCCCTGTTTATAAGGATAGGATCAAACTGAAAAAAGGATGATGCTGCGATGTCTGGTACTACTTTTGGACCATCATGCTGTGCACAAGGGGATAACTTAGGAACATAATATTTCTTTGATAACTGTTTTCTTGTTTCCTTTCAATCTCAAAATTGATCTTTAATTTAATTACATTTCATTTGCTAGTTAACACTAAACAGAAAAGTGCATCATTTAGTCAACATAGGGCTAGTTGCCATGTGGACTCCTATTCCCTTATCAAGTCTTCTAAGTTTGTCTACACTAAAGTTGCTTCAGTCCATCACAAAGCATGACATTTTATTATATGGGAATCCTCATCCCCATTTCTGAGTGGATCATTCCTATTAGCTTGAAACTGGTGAAGGGGAGGACATACATTGACTTAAAAATGATTACATACAGTACCTTTGATGTTAAAAATAGAAATCTGAACATGTTAAAGATGACTTAATAATTTCAGCTCAATTTGTCATGCATTTCTGTTCAGATGATTACATACAGTGCCTTTGATGTATTTTAAGAGAGCAAAGGCAATGTGTTTGTGTTATCCTCAAGCTAATTAATTTACTGCTTAAACAAAAAAACACAGTTATCTCACCTATCCATCTATATATTTTTCTCAGGCGCTGTTTGTAAAGTTACGGCAGCTAGCTAGTGTTGCTGGTGATGTCTTACTGGGTAAAGAGAAGATACAGAAGGTCTTGCTCTCAAGGCTAACTGAAACGGTTGTCATGTGGCTCTCCAATGAACAGGAATTCTGGGATGTTTTCGAGGATCAATCCATCCAACTCCGGCCTTCAGGACTACAGCAGGTATATTTTCTCAAGCTTTCATGTTACTTTGGTTCAAATACTAAAAGATCATTACTTTATGATTTCAGCTTATTCTTGATATGCACTTCGTCGTTGAGATTGCTGTCTGTGGGCGGTATCCACACAGACCTGTTCAGCAGCTTGTGTCGGTAATCATAACTAGGGCAATCGCAGCTTTCTCAGTGAGAAATGTTGACCCACAAAGGTCTGTAATCATGCTTTCTGCCGTTCACATTTTTTCCTTTTATTTAGTTGCCTGTCTTTCATGGCCGAATTGCTCAGACTGTTGTTTTCTTCCTCTCATTATTCAGTTCTCTACCCGAGGATGAATGGTTCCTCGACATGGCCAAGGTTGCAATTAATAAGCAATTAGGGACTTCAGGATCTGAGTCCGAGCTTGAGGAGCCTGTGGTTGTACATGATGAAATCTCGGATTCTGAAGAGAGTAGTATTTCAAGTCCATCGACGATAGGATCTGAAGATTCATTTGCTTCTGCAAACAATGATGATCTAGAAACTCCTGTATATTTCACGGATCCCGAGGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024066