BGIOSGA024079

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Revision as of 06:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024079| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024079, complete gene.| tag = OsI_265...")
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Gene Name

BGIOSGA024079

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024079, complete gene.

LocusTag

OsI_26501

Ensembl Transcript ID

BGIOSGA024079-TA

Ensembl Protein ID

BGIOSGA024079-PA

Length

4726

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:20670345..20675070

Sequence Coding Region

20674953..20675070,20674627..20674756,20674463..20674534,20674295..20674360,20674135..20674206
,20673987..20674058,20673818..20673889,20673670..20673735,20673471..20673536
,20672896..20673293,20672747..20672803,20672536..20672595,20672130..20672440
,20671762..20672030,20671531..20671666,20670764..20670903,20670501..20670657
,20670345..20670431

Genome Context

<gbrowseImage1> name=IndicaChromosome07:20670345..20675070 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:20670345..20675070 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGTTCGCGTGGTGAAGAGCAAGTCCCTGCCCATGATTGCTTCTGCCGCCGTCTTCTTGCTGCTGCTCTCCGCCGCGCTGCCGCTCTCGCAGTCTTACACTTATGAGCAAGATGTGTTTGCAATAAATGGCTTGTACACTGCACTTGGGTCACCTTCAGTGCCTGGATGGATTACAAACGGTGGCGACCCCTGCAATGAAGGCTGGCAGGGTGTTGAATGCGTGGTCTCAAATATTACCTCCATAACTCTCAATGCTGCAAATTTGGGCGGACAACTGGGTAACACACTAGGGAATTTCACATCGCTAATCACCTTAGATCTTAGCAACAATAATATCGGTGGAACCATACCAGATAATCTGCCAATCACATTGCAGCGTTTTTTCCTTTCTGGTAACCAGCTAAGTGGTAGCATTCCAAGTACATTGTCGACACTTACGCTTTTGACAGGCTTGTCCCTCAATAACAATCATTTATCTGGAGAGATACCAGATGCATTTTCAACTCTAACTGGACTTGCAAATTTAGATTTTTCTTCCAACAACTTGACTGGTCCTTTGCCACCTTCAATGGGAAACTTGACAGCATTGACTAGCCTGCATATTCAGAACAATCAAATAATTGGGTTGCTTAATGTGCTGCAAGATCTCCCTCTCCAAGATTTGAACATAGAAAACAATCTTTTCTCCGGTCCTGTGCCTGTGAAACTAGAGAACATACCAAATTTTAAGAAGGATGGGAACCCATTCAATACCAGCATAGCCCCATCAGCATTGCCTCCTGCTGCACCGACACCATTACCATCAGTATCACCTCCAGCAGGGCATGTCCCCACAAAAGAACCTTCAAATTCTTCTATTGCACCAGCAGGGAATGCCCCATCAAGAAAAAACAATGTTTCTGCAATGAAATTTGTTGGATACATTCTTGTTGGGGTGGTATCCGCGGTGGTTCTCGTGCTAATGGTGATGTTTTGTCTATCCAAGTACAAAGAAAGAAAATCAAGAGATGATGTGTATACAAAAAACCAGTTAGGAAGGTCTCCTCAAAAGCTTGGAGAACCTAAAATCAAGGAAGTTTCAGACATCAAGGAACCACCAGTTAAACTCAAGAATAATGCTGGAAAAGCTTCAAATGTGATTTCTCATACAAGGGAGGAGCAGAAATTGAATGTGTCAACAGCAGCAGCTTCAGATGCAGTTTATGATTCAAGGGAAGAGCGGAAGCCAGGTTCATCAATGTCAGCTGCTCCTAGGGTGGTTACAATGGAACAAAAAGAGCATGTGATTGATATGGAAAAAAAAGATAATTTTGTGGATGAACAACTGCATCCTCCACAGTCTGCTGTACTGCGTACTGAAAAGGTCACTGTACATCCCAGCGTGCGTACTAGAAAGGGAAGAGTACCTTCAGCTGGGAAATTGGATTTAACAACTACCGTCAAGTCATTCTCTATTGCGTCCCTTCAGCAATATACCAATAGTTTCAACGAAGAAAATTTGATAAGAGATAGCAGGTTTGGTAAGGTATATCTGGCAGAGCTTCCGGATGGAGAGCTACTGGAAGTTTTGAAGATTGATGCTGCTAACTCAAGAATACCAGCGGATGCCTTTCTAGAGCTAGTTGTGAACATCTCTGAACTGACGCATCCTAACATACTCGGGCTTGTTGGATATTGTGCTGAGTTTGATCAGAGATTACTTGTATATGAGCACTGTAGCAAGATGACTCTACATGATGAACTTCATTATGCTGATGACTCAAACAAGGGATTATCATGGAATGCTCGCCTCCAAGTCGCTGTGGGGGCAGCAAAAGCATTACAATATCTTCATGATGGTTGTCAACCTCCAATTGTACACCAAAATTTTGAACCGTCTATTGTTCTTCTCAACAGCACTTTAGTTGTGCATATTTCTGAATGTGGTCTTGCAGCACTGTCATCAAGATCAGTATCCCAGTTGTCTGGCCGTATGCGCACCTTGTTCCATTATGAAGCCCCCGAAGTGCATGAATCTGGATTATTAAGTGATCGAAGTGATGTTTACAGCTTTGGAGTTGTCATGTTGGAACTTCTTACAGGGCGTAAACCTTATGACAGTTCACGTCCACGTGCTGAGCAACACCTGGTGCGGTGGGCCACTTCCCAGCTTTACGATATCAATGCTATATCAAAGATGGTAGATCCCTCTATTCGAGGCCAATGTTCTGAAAAGGCGTTGTCGCGTTTTGTTGACATTATCAGCAGTTGTATTCAGCATGAGCCAGAGTTTAGGCCCTCAATGTCTGAAGTTGTCCAAGATTTAACTCGCATGGTGAGTGATGCAACAAAGGCTTCCATGTAG</cdnaseq>

Protein Sequence

<aaseq>MDVRVVKSKSLPMIASAAVFLLLLSAALPLSQSYTYEQDVFAINGLYTALGSPSVPGWITNGGDPCNEGWQGVECVVSNITSITLNAANLGGQLGNTLGNFTSLITLDLSNNNIGGTIPDNLPITLQRFFLSGNQLSGSIPSTLSTLTLLTGLSLNNNHLSGEIPDAFSTLTGLANLDFSSNNLTGPLPPSMGNLTALTSLHIQNNQIIGLLNVLQDLPLQDLNIENNLFSGPVPVKLENIPNFKKDGNPFNTSIAPSALPPAAPTPLPSVSPPAGHVPTKEPSNSSIAPAGNAPSRKNNVSAMKFVGYILVGVVSAVVLVLMVMFCLSKYKERKSRDDVYTKNQLGRSPQKLGEPKIKEVSDIKEPPVKLKNNAGKASNVISHTREEQKLNVSTAAASDAVYDSREERKPGSSMSAAPRVVTMEQKEHVIDMEKKDNFVDEQLHPPQSAVLRTEKVTVHPSVRTRKGRVPSAGKLDLTTTVKSFSIASLQQYTNSFNEENLIRDSRFGKVYLAELPDGELLEVLKIDAANSRIPADAFLELVVNISELTHPNILGLVGYCAEFDQRLLVYEHCSKMTLHDELHYADDSNKGLSWNARLQVAVGAAKALQYLHDGCQPPIVHQNFEPSIVLLNSTLVVHISECGLAALSSRSVSQLSGRMRTLFHYEAPEVHESGLLSDRSDVYSFGVVMLELLTGRKPYDSSRPRAEQHLVRWATSQLYDINAISKMVDPSIRGQCSEKALSRFVDIISSCIQHEPEFRPSMSEVVQDLTRMVSDATKASM</aaseq>

Gene Sequence

<dnaseqindica>1..118#315..444#537..608#711..776#865..936#1013..1084#1182..1253#1336..1401#1535..1600#1778..2175#2268..2324#2476..2535#2631..2941#3041..3309#3405..3540#4168..4307#4414..4570#4640..4726#ATGGATGTTCGCGTGGTGAAGAGCAAGTCCCTGCCCATGATTGCTTCTGCCGCCGTCTTCTTGCTGCTGCTCTCCGCCGCGCTGCCGCTCTCGCAGTCTTACACTTATGAGCAAGATGGTATGTACTGTCCTTTTGGTGGTTTTGACTGTTGCAAAGATTCAGAATTCATAGCTGTACATGATCATGAATTGATGACATCATAGGGACCCAGATTATTTATGGTTTGATGACGGAGCTGTCTTGTACTATCACATTTTACTCCAAAAATGTGTTCTGTGGCACCTTATTTTTGTGCTTTGTTTGTGTTTATCAGTGTTTGCAATAAATGGCTTGTACACTGCACTTGGGTCACCTTCAGTGCCTGGATGGATTACAAACGGTGGCGACCCCTGCAATGAAGGCTGGCAGGGTGTTGAATGCGTGGTCTCAAATATTACCTCCATGTATGATCTGCTATTACACTTTCGTTTTGTTAATGTTGTTTGTTTGATTACCTGTTTATCTGGTTATCTGAACAATGTGATATTTCTGGTAGAACTCTCAATGCTGCAAATTTGGGCGGACAACTGGGTAACACACTAGGGAATTTCACATCGCTAATCACCTTGTAAGCTGATCATTCGTGAAGTTTAAGATTATTGGTGATTTCCTCTCGAATTGACACTGTTATTGACTTGGTTCTTAATGCTTCTTGGTTTACCCAATGTAGAGATCTTAGCAACAATAATATCGGTGGAACCATACCAGATAATCTGCCAATCACATTGCAGCGTTTGTATGCCCATTTGATCATTTTGTTACTCTTCCAAACCATCTATGTGGTTATTTTAATCTTTTACTATGGTTTTGCTTGTCAATTACAGTTTCCTTTCTGGTAACCAGCTAAGTGGTAGCATTCCAAGTACATTGTCGACACTTACGCTTTTGACAGGCTTGTAAGTATATTGTTGCCTACACATTCACAAGACTTCATAAAGTTAGTGCTTTCAGTGATAATTCTTGCATTTGCAGGTCCCTCAATAACAATCATTTATCTGGAGAGATACCAGATGCATTTTCAACTCTAACTGGACTTGCAAATTTGTAAGAGCAAGTTTAAGTTTGCTCTAAGTGTTATTCTATACTAGCATTTGTTGACAATGTGAAGTTTCTTACCAAAGTGATCAACCTTCTTGAATAGAGATTTTTCTTCCAACAACTTGACTGGTCCTTTGCCACCTTCAATGGGAAACTTGACAGCATTGACTAGCCTGTGAGTATTGAAGTTTATTGCACTGTCTTTCAAGTTGACTTTTCACTAGTGTCAAGTACTTAATGTTATACTATGATCACAGGCATATTCAGAACAATCAAATAATTGGGTTGCTTAATGTGCTGCAAGATCTCCCTCTCCAAGATTTGTATGTACACAAAACTACAGTTTTTTTTTACTTAATTCTTTTCTCCAAGAAGTTCAGGAAACCTGCTATTTCAGTAAAGATAATTTCTCTCTCTTTTTTCATGCCTTGTTTTCTGTGGTGACTAATTCAACAGGAACATAGAAAACAATCTTTTCTCCGGTCCTGTGCCTGTGAAACTAGAGAACATACCAAATTTTAAGTAAGGAACTTCCCCTTGATTGAGTTGTTTCTGTCGATCGTTGCTCTAACTTTAATGTTTAAAAATCAATTCCATTGCTCGTATACTCTTTTAATATTAAGAATCAACTAGTTTTTCATGTGCATATTTGTGTTTAGCGAAAGAAGAAAAGTTCATTCAAACTAATGTACCACACAGGAAGGATGGGAACCCATTCAATACCAGCATAGCCCCATCAGCATTGCCTCCTGCTGCACCGACACCATTACCATCAGTATCACCTCCAGCAGGGCATGTCCCCACAAAAGAACCTTCAAATTCTTCTATTGCACCAGCAGGGAATGCCCCATCAAGAAAAAACAATGTTTCTGCAATGAAATTTGTTGGATACATTCTTGTTGGGGTGGTATCCGCGGTGGTTCTCGTGCTAATGGTGATGTTTTGTCTATCCAAGTACAAAGAAAGAAAATCAAGAGATGATGTGTATACAAAAAACCAGTTAGGAAGGTCTCCTCAAAAGCTTGGAGAACCTAAAATCAAGGAAGTTTCAGACATCAAGGAACCACCAGTTAAACTCAAGAATAATGCTGGAAAAGGTTGTCATTGTTCTCTTGGCAAACAAATGACTTCCAGTTTTTTTACTTTATTTTTTGCCCATTGACTAAACTGATCTCTTGGGCGGTGACAGCTTCAAATGTGATTTCTCATACAAGGGAGGAGCAGAAATTGAATGTGTCAACAGCAGGTGAACAATTTTATTCCTAAAAAAGTGCACATGCCCTTTTTTTATTCGTCACTATTCTGCAAGTTTTAGTATGGTAAAGCTTAATAGAAACATTGGCATGGCAGCTGCTTTCTTCCTCTCTTGATTTTGACATTCCAATATTTCTTTGCAGCAGCTTCAGATGCAGTTTATGATTCAAGGGAAGAGCGGAAGCCAGGTTCATCAATGTCAGGTAAATGACTCGAAACTAAATTACATGCAGAAGTGCTATTTTACTGCTCTGCGAGTTTGAGTATGTCAAAGTTAACATGAGAACTTACATGGCAGCTGCTCCTAGGGTGGTTACAATGGAACAAAAAGAGCATGTGATTGATATGGAAAAAAAAGATAATTTTGTGGATGAACAACTGCATCCTCCACAGTCTGCTGTACTGCGTACTGAAAAGGTCACTGTACATCCCAGCGTGCGTACTAGAAAGGGAAGAGTACCTTCAGCTGGGAAATTGGATTTAACAACTACCGTCAAGTCATTCTCTATTGCGTCCCTTCAGCAATATACCAATAGTTTCAACGAAGAAAATTTGATAAGAGATAGCAGGTTTGGTAAGGTATATCTGGCAGAGCTTCCGGATGGAGAGGTACAAAACTGTTGGGCAGATTTTCTAGTAGTTACTTTAGCAAGAATTTGTTGATTATACCATCGTCACTTCTGAACTGTGATATTTGCTTTGCATCAGCTACTGGAAGTTTTGAAGATTGATGCTGCTAACTCAAGAATACCAGCGGATGCCTTTCTAGAGCTAGTTGTGAACATCTCTGAACTGACGCATCCTAACATACTCGGGCTTGTTGGATATTGTGCTGAGTTTGATCAGAGATTACTTGTATATGAGCACTGTAGCAAGATGACTCTACATGATGAACTTCATTATGCTGATGACTCAAACAAGGGATTATCATGGAATGCTCGCCTCCAAGTCGCTGTGGGGGCAGCAAAAGCATTACAGTAAGCAAATTATAACTTTTCTATTTTTTTCTTCCCAATTTTGTGAAGTGATTCTATTGATTTGTGAAAATGCTATGTGTATTTTTTTTTTGTAGATATCTTCATGATGGTTGTCAACCTCCAATTGTACACCAAAATTTTGAACCGTCTATTGTTCTTCTCAACAGCACTTTAGTTGTGCATATTTCTGAATGTGGTCTTGCAGCACTGTCATCAAGATCAGTATCCCAGGTACAATAATGTTAATGAAAATATTTTGGCATCAGACTCTTTGGTGATGCTCTGGATGTTCAGTATTTCGGATGCCCTCATGCACTGCTATTTAAGTATTTATAGCATAGCTGTGCATTTGTAATTATAATGAAGGCTAGTGTAAATGAAAGAATTGTATTTAGGAATGGGTATTGCTGATTGCTATGCATTTTCATCACATTGCATCAATTGAGATGACAGAGTCTTTTGTTTGTTTGTTTGCGAGGAGAGATGAAAGAGTTTGTTATAGAAAAGTGATCTTGTTATATTTCGCAGGGATGCTTAGCTGACAGCAGCTAACAAATTTAGGCTTCAGATAATATTTCTTTCTAGATCTATTCTCAATCTCATTTTTTAATTGCCATCCTTGTATTCCAGTATAGACGCCCCCCGTGTCAATTGACATTGCTAACTTGTGAAGCTGTTCTTCTTTTAATCTGCTTAGGAATTGCTAGTGTTTCCGAAACACATACTGTCATGTTTAGCAGTAGTTATATACTTTGGAATTTGGATCGCAACAGAATAAGGTTGCTAGTTTATTTTTGACTTTTTGAGTGAATGTTACTATTTCTTTATTGATAAATAGTGTACTCTTTTTTATGTCAGTTGTCTGGCCGTATGCGCACCTTGTTCCATTATGAAGCCCCCGAAGTGCATGAATCTGGATTATTAAGTGATCGAAGTGATGTTTACAGCTTTGGAGTTGTCATGTTGGAACTTCTTACAGGGCGTAAACCTTATGACAGGTAACATTCCAAAAGGACAATATCCCAGACCCACTTCCACTTAGCTAAGTATCCTTGTTTTGCTTGAAGATGGTTTCTAATTTTTCTCATGGAAACGGAACTGCAGTTCACGTCCACGTGCTGAGCAACACCTGGTGCGGTGGGCCACTTCCCAGCTTTACGATATCAATGCTATATCAAAGATGGTAGATCCCTCTATTCGAGGCCAATGTTCTGAAAAGGCGTTGTCGCGTTTTGTTGACATTATCAGCAGTTGTATTCAGGTAAGATATTTGATATTACCATCAACACCAAGATGGATCGGTGTGGCTGACCTGATTCCTCTTATGCAGCATGAGCCAGAGTTTAGGCCCTCAATGTCTGAAGTTGTCCAAGATTTAACTCGCATGGTGAGTGATGCAACAAAGGCTTCCATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024079