BGIOSGA024084

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Revision as of 06:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024084| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024084, complete gene.| tag = OJ1720_...")
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Gene Name

BGIOSGA024084

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024084, complete gene.

LocusTag

OJ1720_F04.113

Ensembl Transcript ID

BGIOSGA024084-TA

Ensembl Protein ID

BGIOSGA024084-PA

Length

5045

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:20603233..20608277

Sequence Coding Region

20608227..20608277,20607593..20607651,20607039..20607129,20606148..20606202,20605955..20606045
,20605212..20605407,20604373..20604601,20604035..20604213,20603660..20603929
,20603527..20603582,20603233..20603386

Genome Context

<gbrowseImage1> name=IndicaChromosome07:20603233..20608277 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:20603233..20608277 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACGAGAAGGCCTCCGTCTCCAAGGAGCTCAACGCCAAGCACAAGAAGATATTGGAAGGCCTCCTGCGGCTGCCTGAGAATAGAGAATGTGCAGACTGCAAGTCAAAGGGTCCTCGATGGGCAAGTGTAAATCTTGGGATCTTTATATGCATGCAGTGTTCTGGAATTCATAGAAGCCTCGGGGTACATATATCTAAGGTAAGATCGGCTACCCTGGATACATGGCTGCCAGAGCAAGTTGCATTTATTCAATCAATGGGGAATGAAAAGTCAAATAGCTACTGGGAAGCGGAGCTGCCCCCTAACTATGATAGGGTTGGGATAGAGAACTTCATCCGTGCAAAATACGAGGACAAGAGATGGATACCGAGGAATGGGTCATCAAGACCATCATCTGGTGCTAGAGATGAGAAGAGCTCAGAGTCACAAACTAGTGTTAACAGGGGTGGCCATAATCAAAGATCTTCATTTGAGCAACACCGCACTTCACCAGCTGCAGTGAGCAAAATTGCTCCAGTGGTTTCTAGGACGCCCACCCAGGCACCACATCAGCCAAAAGCACAACCATCAGTTCCCAAGGTTTCACCTCCTCAACCCGAGAAATCACCTCCTAATGCAACACCACCAAAGGTTGAGAAGCCATCAGTTGCACCACCTCCTAAGGTTGACTATGCAACTGATCTCTTCAACATGTTATCAATGGATGGAACAACCGAGAAAGAAGCAGAGTCATCTTCTAATGATGATAGTGCATGGGAGGGCTTCCAGTCTGCAGAGCCAGTACCTAGCTCAGACAAAAAGGATTCTGCTAAGCCAGTAGAAAGTAAGCCCCAGTCTACATCAGGCATAGAGGACTTGTTTAAAGATTCACCAGCTGTGACAGTATCCTCAGCTCCAGCTGCCCCACAAGTAAATGTGAAGAATGATATCATGAGTCTGTTTGAGAAGTCCAGTATGGTTTCGCCATATGCTGTCCAGCAGCAGCAACTTGCTTTTATGACCCCCCAGCAGCTTGCACTTCTGTCTCAGCAGCAAGCTTTACTAATGGCTGCTCTTAAAGCTGGAAATGCACCCCAAATGATTCCAGGGAACGCCAGTCTGCTAAATGGTAATGGTTCTAATCCTGCCAATGGAGGCTTGCCTTCACAAAGCTGGACAAATCTTGCTTATCAGAATCCTGGGTTGGCTCCAGTAGCAGCACAGAATGGTGCCACCAAGGTTGCGAACAACAATCAGGAATTCTCTTTTGGGAATTTCAATTTTAGTACACCTGGAGCATACAACACTAGCTCATCTGTCCCAGCAAATGGGGCCGCAAGTGCAGCTGCTAACAAGAGCACATCCCCGACCTCTTCTTCCCTCCCCTCTCAATCAGGCAAAGAATATGATTTTTCATCATTAACTCAAGGACTGTTCTCCAAGCGATGA</cdnaseq>

Protein Sequence

<aaseq>MNEKASVSKELNAKHKKILEGLLRLPENRECADCKSKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKSNSYWEAELPPNYDRVGIENFIRAKYEDKRWIPRNGSSRPSSGARDEKSSESQTSVNRGGHNQRSSFEQHRTSPAAVSKIAPVVSRTPTQAPHQPKAQPSVPKVSPPQPEKSPPNATPPKVEKPSVAPPPKVDYATDLFNMLSMDGTTEKEAESSSNDDSAWEGFQSAEPVPSSDKKDSAKPVESKPQSTSGIEDLFKDSPAVTVSSAPAAPQVNVKNDIMSLFEKSSMVSPYAVQQQQLAFMTPQQLALLSQQQALLMAALKAGNAPQMIPGNASLLNGNGSNPANGGLPSQSWTNLAYQNPGLAPVAAQNGATKVANNNQEFSFGNFNFSTPGAYNTSSSVPANGAASAAANKSTSPTSSSLPSQSGKEYDFSSLTQGLFSKR</aaseq>

Gene Sequence

<dnaseqindica>1..51#627..685#1149..1239#2076..2130#2233..2323#2871..3066#3677..3905#4065..4243#4349..4618#4696..4751#4892..5045#ATGAACGAGAAGGCCTCCGTCTCCAAGGAGCTCAACGCCAAGCACAAGAAGGTTCGTATATCCTCCCGTTCCGTTATATGTCGATTTGTTCGGATCGGAGGCTGGCCCTTTCGATTTGGGTTGGAAAGCTACGGCAGAGTCGATTCGGCGTGCGATTTCGTTTGTTGTTAGGTGAGGGAGATTTGGGATCCGCGATTTCGTGGGTTCCTGATCTCCCCGCTCCTGAATTGCGCGCGGTTGCTTTGCAACTCTTTTTGTGGCGTTAGGAAGAGCGTGGCGCAGATCGGAATTCGCTTCCTTTGTTTTGCCGTTATTATGAATCGGGGAGCGGGCGCTTTTGCTAATTTAAGCTTGATTATATGGATTTTGTGAATTGTTCGACTGGTGGAAATCGTTATTTGAAAAATTGTTTGTAATTTTATAGTAGGTATCCTTCTCAATCGTGGCAATAAAAAGTTAAACAATTCGCAGTCAACTGTACAAGCAACCTAGCTATCTTCGTTGCTACAAGATATTGTTACCATTTTGATTTTTTCATGACCCGCTCAAGCCTCAACAATATTAGGTATTGTTCATGAAGTACCCTGTCTTATTTACCATGTTTATGGCTCGTCCTTGATTTCCAGATATTGGAAGGCCTCCTGCGGCTGCCTGAGAATAGAGAATGTGCAGACTGCAAGTCAAAGTGAGTGATCCTGTGCAATTGGTTCTCCAAAAGATGGCTATTGATGCATTATACAAGTTTATGTTTTATCATTAGCTTTGCTGCTAAGAGTACTTTCACTTGATGACGTCCTTTTTTTTAGAAGTTAACATTCTGATTCATTGTCCGCTTGCTGATTTGTGTTGAGCAAGTTCTATGGCATTTGGAGGGCCTCTAGTAATCTAGAAGCAATTATTTAAGATATTTATTCTTATTGCTTCATCACTGGTTTGTTGCATCCAACATGTTAACCATCTATTCCTGGAAATGAAAATTTTCTGTTCTATTTATTGACTTATATAGTCAGTATAGTTGGTTAAACCTCCTCTCCATCATGTCTAATGTTACCTGTAAATTCATCTCTGAGCATGTAATGTTAGAACTGATAGGTAGACACTTGCATGTGCCATAGTTCTTGTCAACTGACTGTTTCCCCATTTTTCAGGGGTCCTCGATGGGCAAGTGTAAATCTTGGGATCTTTATATGCATGCAGTGTTCTGGAATTCATAGAAGCCTCGGGGTACATATATCTAAGGTCAGTGAATTATGTGCATGAGTTCAACTGTTTATTTTCGAACTCAGTATGCCCACTTTTTTTTTTCTCCTTCATACAAGTTCTGACAAATTTGGCTTGAAACACAACTTGAGTACTTTGAATGACCAACTTTTCATGAAAATTTGGTAGCTGCTCTATCAGTGTCATTTTTTTTATAGTATCAAAGTATATTATGCTTGTTTCTTTCAGTTCATTGCATCCTGGCTAATGTAAGTTTATATAAGATTATAAACATAACATAAATTCAACATGGTAGAATGGCCATCAATCCATCATATGCGAAACCGGGCTGTTTGGTTTGGTGACCAGAGTTTGCGATACCAAACCTTAGGCGTGCTACACTTTAATAGCCTAGAGCCTGGTTTGTTACAACTGTGACATGCCACACTTTATTAGCTCTTCCCACATGTCATACACTCAATTTGGTGCCTAACTTTGCCACACTTGTGGCCAACGATTTGTTGGCCACACTTTGTGTGGCAAACCACACCTTTGGTAGTTGTGGCAAAGATAGTCATCAACCAATAAGCTTAGCTATCTGGATTCTGCAACAACCTTGACTTCGAAGCTTCTGAGCTGGCTGGTTTATCTTTTTCATGTACTTTGAGAACTCGTGCTCACAATTTTTTACTGGTCATAATTGCACCAAATTGTTTGTGTATATTACAAACAGAGAATGTGAAACAACTATGTATCTGTTTTATGTTTAATTCTTTGAGATGCATTTCTTTCTTTCATGTGGCCTCGCCTTCAAATCTATATCAACAGCATGCGGTTTTTGTCTATTTAATGAACCATTTTTTTCCCTGACGCAGGTAAGATCGGCTACCCTGGATACATGGCTGCCAGAGCAAGTTGCATTTATTCAATGTATGTATTACTCCCTGACCAGAAATTTTTAATATTTGCCATCAAACAAAGGGGTAATGCAGTTCTCAATGGTGATTGTATTCCCGTCTTCACTTCTTTCAGCAATGGGGAATGAAAAGTCAAATAGCTACTGGGAAGCGGAGCTGCCCCCTAACTATGATAGGGTTGGGATAGAGAACTTCATCCGTGCAAAGTAATGAACCTCTCCAACTTTCAGTACCTATAAATCTAGTACAATCCATTTGTCTTGCTATAAATCTAGTACACCAATGTAAATCACCTGCCTATCCAAGGCCTCCCATCCCCCCGCGCAAGCAAACAAATACAAAACCAAAATAAAGGTTTAATTTTGCTTTTTAATACTTACCATTCATTAATGGGGGAATGAAAAGGCAGTTGCTCCATCCGGTTATAAATATTTAATTCTAAGGACAAGATTTGGTCAAATTTCTAAAATTCTGACCATTAAAAAAAATTCTAAAATGCTTAGTTTTAAACACAAAAAATGGCCATCGATAGATTTGACTTGAAATGTACTGTCATAATATCATAAACTTATTGGATTTTATAAACTTATCCTAATATAAAATTGGTTGCTGGAATTTTAAAAGGTTGACCAAATCTTTGTGCTAAGTGTCAAACATTTATGACCAGAGGGAGTAATTTGTAGGGGTGTTTATGGATCTAACCTTTGGAACAATGTGTTGGACTAATGTTATTAACTTATGTCTAAAATGTAGATACGAGGACAAGAGATGGATACCGAGGAATGGGTCATCAAGACCATCATCTGGTGCTAGAGATGAGAAGAGCTCAGAGTCACAAACTAGTGTTAACAGGGGTGGCCATAATCAAAGATCTTCATTTGAGCAACACCGCACTTCACCAGCTGCAGTGAGCAAAATTGCTCCAGTGGTTTCTAGGACGCCCACCCAGGTAATCCTACTGGATTATGACAAGCTTTTCCTAGGTGTTGATTATCAGTTAAGTTTATTGATACTTGCCTTTGGTAGTAGCATCTTTAGATGTAAACAGCTTGAGGGATCAACACTCTTTTCTTGAAGCCGAGCTATATATATTCCAAATTGTAGTTCTTAATTACTATCTGCCACTTCAATAGTTAATCGAAAATGGAGAACGATCTATAAGTTTCATATATGTGTGTGTTATATGCCTTGCGCACAAACTGTAGATTTCCAAACTGAAAAATGAGAATGATCATGTGATAGCGTGTATCATGCTAATGGATGATCATGTTTATAGTTTTGTTTCTTGTGCCTGACCTTGATAACTTGATGATAATTAATGGTTTCACTTTGCTTACATGATTGAAAACACATTCTTACAACCAGTGATATTTTCCACATTAGGTTAATAAGTGTTAAGTTAAAGTTGGCACAATATCCATTGAGTACTTCAAGTAATTTGGAGACTTAAGTTATTATTAAGTTTTATTTTATACTTGCTGCATTTTGTTGTGTAATAATTTATTACTAGCTTCTAATAGTTTTAATCTGGTACAACTGGTCAACTGCATTGAAATCAGGCACCACATCAGCCAAAAGCACAACCATCAGTTCCCAAGGTTTCACCTCCTCAACCCGAGAAATCACCTCCTAATGCAACACCACCAAAGGTTGAGAAGCCATCAGTTGCACCACCTCCTAAGGTTGACTATGCAACTGATCTCTTCAACATGTTATCAATGGATGGAACAACCGAGAAAGAAGCAGAGTCATCTTCTAATGATGATAGTGCATGGGAGGGCTTCCAGTGTAAGATATTATGACTTAACATTTCTATTGAGGAATTATTCTTGTTATATGAGCATCTTTTTATGAAATGTTCTGCGAGTGCTTCACCATATTCCTTACTTGCATACTGTGGAGTATCTTTTAATTTGGGCTCCTGTGTTCTCTTTCTCAATTGTTCAGCTGCAGAGCCAGTACCTAGCTCAGACAAAAAGGATTCTGCTAAGCCAGTAGAAAGTAAGCCCCAGTCTACATCAGGCATAGAGGACTTGTTTAAAGATTCACCAGCTGTGACAGTATCCTCAGCTCCAGCTGCCCCACAAGTAAATGTGAAGAATGATATCATGAGTCTGTTTGAGAAGGTCAGCGCCAGCATTACTTTTACTAATGCTTTTGTGAAATGGCTCTGTCATTTAAAAGAAAGAGCACATCTATGGTTTATCTGAAGAAATACGTGTATTTTGCAGTCCAGTATGGTTTCGCCATATGCTGTCCAGCAGCAGCAACTTGCTTTTATGACCCCCCAGCAGCTTGCACTTCTGTCTCAGCAGCAAGCTTTACTAATGGCTGCTCTTAAAGCTGGAAATGCACCCCAAATGATTCCAGGGAACGCCAGTCTGCTAAATGGTAATGGTTCTAATCCTGCCAATGGAGGCTTGCCTTCACAAAGCTGGACAAATCTTGCTTATCAGAATCCTGGGTTGGCTCCAGTAGCAGCACAGAATGGTGCCACCAAGGTAAGGGCTTTTAGATCATCTGTATAAATATGTGTTTTACTGTATGTTCATATTTTCATGTCTTTGTTACTTGGCAGGTTGCGAACAACAATCAGGAATTCTCTTTTGGGAATTTCAATTTTAGTACACCTGGGTAAGCAATATTGCTTGACTAGTTTTTGGCAATTAAAACTTCATACCATAGCTTACTTGGTCGCGAAAGAAATTTAGATGTGCTTTGAGGTCACAAATCATGGCTTAGCTTTTCTGATGCTTACTTTTGTTTTGATGCAGAGCATACAACACTAGCTCATCTGTCCCAGCAAATGGGGCCGCAAGTGCAGCTGCTAACAAGAGCACATCCCCGACCTCTTCTTCCCTCCCCTCTCAATCAGGCAAAGAATATGATTTTTCATCATTAACTCAAGGACTGTTCTCCAAGCGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024084