BGIOSGA024123

From RiceWiki
Revision as of 06:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024123| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024123, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA024123

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024123, complete gene.

LocusTag

OSJNBB0041B22.106

Ensembl Transcript ID

BGIOSGA024123-TA

Ensembl Protein ID

BGIOSGA024123-PA

Length

4767

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19934106..19938872

Sequence Coding Region

19937900..19938872,19937370..19937726,19935800..19935910,19935440..19935663,19935115..19935325
,19934764..19935001,19934527..19934677,19934106..19934423

Genome Context

<gbrowseImage1> name=IndicaChromosome07:19934106..19938872 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:19934106..19938872 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCCACGGCCGCCATTGCTGCGCTCGCGTTGGTGTTCTTCGTGTTGCTGTGTGTGAGAGATGGTGGCGGCGTCGACGCGGCGGACACGCTGTCGCAGGGGCAGTCGCTGGGCGCGAACGACATGCTGGTGTCGGCGAACGGCACGTTCAAGGTGGGATTCTTCACGCCGGCGGGTGGCGACCCGGGGAAGGTGTACCTCGGGGTGATGTACGCGACGTCGAACGTGCAGACGGTGATGTGGGTGGCGAACCGCGACGCCCCAGTGAGAACGGCGGCGGGGGCCGCCTCCGCCACCGTGACGGGCTCCGGCGAGCTGCTGGTGAAGGAGGGCGACCGCGTCGCGTGGCGGACGAACGCGTCGGCCGCGGGGCGCTCCAAACACACGCTGACGATCCGCGACGACGGGAACCTCGTGATCTCCGGCAGCGACGCCGCCGGCACGGACGTAGAGTGGGAGAGCTTCCACCACCCGACGGACACCTTCGTCCCGGGCATGGAGATCGCGCTCCGGCAGACCAACGGCGACCGCACGCTGTACACGTCGTGGAGGAGCGACGCCGACCCGGCCACCGGCGACTTCACGCTGGGGCTGGACGCGTCGGCGCAGCTCTACATCTGGCGGAGCCAGGGCGGCAAGAACTCAACCTACTGGAGGTCGGGGCAGTGGGCGAGCGGCAACTTCGTCGGCATCCCGTGGCGGGCGCTCTACGTCTACGGCTTCAAGTTGAACGGCGACCCGCCGCCGATCGCCGGCGACATGTCCATCGCGTTCACCCCCTTCAACTCGTCGCTCTACCGCTTCGTGCTCCGGCCGAACGGCGTCGAGACGTGCTACATGCTCCTCGGCTCCGGCGACTGGGAGCTCGTCTGGTCGCAGCCGACCATCCCCTGCCACCGCTACAACTTGTGCGGCGACAACGCCGAGTGCACCGCCGACGACAACGAGCCCATCTGCACCTGCTTCACAGGTTTTGAGCCAAAATCTCCGCAAGAGTACAACAACGGCAACTGGACGCAGGGCTGCGTGAGGAGCGTTCCACTGACGTGCAGCAGCGAGAGGAACAACACGACCGCCGGTGGCGGCGACGGGTTCACCGTCATCCGGGGCGTGAAGCTGCCGGACTTCGCCGTGTGGGGATCGCTGGTGGGCGACGCGAACTCGTGCGAGAAGGCGTGCCTGGGCAACTGCTCGTGCGGGGCGTACAGCTACAGCACCGGCAGCTGCCTCACCTGGGGGCAGGAGCTGGTGGACATCTTCCAGTTCCAAACCGGCACCGAGGGAGCGAAATACGACCTCTACGTCAAGGTCCCATCTTCTCTATTAGATAAAAGCTCGGGGCGATGGAAAACCGTTGTCGTCGTCGTAGTTGTGGTCGTGGTGGTTGTATTGCTGGCATCAGGCCTTCTCATGTGGAAGTGCAGGAGACGAATTAAAGAGAAACTTGGCATTGGTAGGAAAAAGGCACAACTCCCGTTGCTGCGTCCTGCGAGGGATGCAAAGCAGGATTTCTCAGGGCCAGCGCAATCTGAACACGAGAAATCAGAGGAGGGCAAGAACTGCGAGCTGCCGCTGTTCGCGTTCGAGACCTTAGCGACGGCCACCGACAACTTCAGCATCTCGAACAAGCTCGGAGAGGGAGGCTTCGGCCATGTCTACAAGGGAAGGCTCCCTGGAGGAGAAGAGATCGCGGTGAAGAGGCTGTCCCGGAGCTCCGGGCAGGGGCTGGAGGAGTTCAAGAACGAGGTGATCCTGATCGCGAAGCTGCAGCACCGCAATCTTGTCAGGTTGCTGGGATGCTGCATCCAGGGCGAGGAGAAGATACTGGTGTACGAATACATGCCCAACAAGAGCCTCGACGCCTTCCTCTTCGATCCGGAGAGAAGAGAGCTCCTGGACTGGAGGACGAGGTTCCAGATCATCGAAGGCGTGGCGCGAGGGCTCCTGTACCTCCACCGCGACTCGAGGCTCCGCGTGGTGCACCGCGACCTCAAGGCCAGCAACATCCTCCTCGACCGCGACATGAACCCCAAGATCTCCGACTTCGGCATGGCCAGGATCTTCGGCGGCGACCAGAACCAGGTCAACACCAACCGCGTCGTCGGCACACTGGGCTACATGTCACCGGAGTACGCGATGGAGGGGCTCTTCTCGGTGAGGTCGGACGTGTACAGCTTCGGCATCCTCATCCTGGAGATCATCACGGGCCAGAAGAACAGCAGCTTCCACCACATGGAGGGCTCCCTCAACATCGTCGGCTACGCGTGGCAGCTGTGGAACGGGGACAGAGGGCAGGAGCTGATCGACCCGGCGATCCGGGGGACGTGCCCCGCGAAGGAGGCGCTGCGGTGCGTGCACATGGCGCTGCTGTGCGTGCAGGACCACGCGCACGACCGCCCGGACATCCCCTACGTGGTGCTCACGCTCGGCAGCGACTCCTCCGTGCTGCCCACGCCGCGCCCGCCGACGTTCACGCTGCAGTGCACGTCGTCGTCGTCGGGGCGGGACATGTACTACAGGGACAAGGAGGAGTCCTACTCCGCCAACGACCTCACCGTCACCATGCTCCAAGGCAGGTAG</cdnaseq>

Protein Sequence

<aaseq>MASTAAIAALALVFFVLLCVRDGGGVDAADTLSQGQSLGANDMLVSANGTFKVGFFTPAGGDPGKVYLGVMYATSNVQTVMWVANRDAPVRTAAGAASATVTGSGELLVKEGDRVAWRTNASAAGRSKHTLTIRDDGNLVISGSDAAGTDVEWESFHHPTDTFVPGMEIALRQTNGDRTLYTSWRSDADPATGDFTLGLDASAQLYIWRSQGGKNSTYWRSGQWASGNFVGIPWRALYVYGFKLNGDPPPIAGDMSIAFTPFNSSLYRFVLRPNGVETCYMLLGSGDWELVWSQPTIPCHRYNLCGDNAECTADDNEPICTCFTGFEPKSPQEYNNGNWTQGCVRSVPLTCSSERNNTTAGGGDGFTVIRGVKLPDFAVWGSLVGDANSCEKACLGNCSCGAYSYSTGSCLTWGQELVDIFQFQTGTEGAKYDLYVKVPSSLLDKSSGRWKTVVVVVVVVVVVVLLASGLLMWKCRRRIKEKLGIGRKKAQLPLLRPARDAKQDFSGPAQSEHEKSEEGKNCELPLFAFETLATATDNFSISNKLGEGGFGHVYKGRLPGGEEIAVKRLSRSSGQGLEEFKNEVILIAKLQHRNLVRLLGCCIQGEEKILVYEYMPNKSLDAFLFDPERRELLDWRTRFQIIEGVARGLLYLHRDSRLRVVHRDLKASNILLDRDMNPKISDFGMARIFGGDQNQVNTNRVVGTLGYMSPEYAMEGLFSVRSDVYSFGILILEIITGQKNSSFHHMEGSLNIVGYAWQLWNGDRGQELIDPAIRGTCPAKEALRCVHMALLCVQDHAHDRPDIPYVVLTLGSDSSVLPTPRPPTFTLQCTSSSSGRDMYYRDKEESYSANDLTVTMLQGR</aaseq>

Gene Sequence

<dnaseqindica>1..973#1147..1503#2963..3073#3210..3433#3548..3758#3872..4109#4196..4346#4450..4767#ATGGCTTCCACGGCCGCCATTGCTGCGCTCGCGTTGGTGTTCTTCGTGTTGCTGTGTGTGAGAGATGGTGGCGGCGTCGACGCGGCGGACACGCTGTCGCAGGGGCAGTCGCTGGGCGCGAACGACATGCTGGTGTCGGCGAACGGCACGTTCAAGGTGGGATTCTTCACGCCGGCGGGTGGCGACCCGGGGAAGGTGTACCTCGGGGTGATGTACGCGACGTCGAACGTGCAGACGGTGATGTGGGTGGCGAACCGCGACGCCCCAGTGAGAACGGCGGCGGGGGCCGCCTCCGCCACCGTGACGGGCTCCGGCGAGCTGCTGGTGAAGGAGGGCGACCGCGTCGCGTGGCGGACGAACGCGTCGGCCGCGGGGCGCTCCAAACACACGCTGACGATCCGCGACGACGGGAACCTCGTGATCTCCGGCAGCGACGCCGCCGGCACGGACGTAGAGTGGGAGAGCTTCCACCACCCGACGGACACCTTCGTCCCGGGCATGGAGATCGCGCTCCGGCAGACCAACGGCGACCGCACGCTGTACACGTCGTGGAGGAGCGACGCCGACCCGGCCACCGGCGACTTCACGCTGGGGCTGGACGCGTCGGCGCAGCTCTACATCTGGCGGAGCCAGGGCGGCAAGAACTCAACCTACTGGAGGTCGGGGCAGTGGGCGAGCGGCAACTTCGTCGGCATCCCGTGGCGGGCGCTCTACGTCTACGGCTTCAAGTTGAACGGCGACCCGCCGCCGATCGCCGGCGACATGTCCATCGCGTTCACCCCCTTCAACTCGTCGCTCTACCGCTTCGTGCTCCGGCCGAACGGCGTCGAGACGTGCTACATGCTCCTCGGCTCCGGCGACTGGGAGCTCGTCTGGTCGCAGCCGACCATCCCCTGCCACCGCTACAACTTGTGCGGCGACAACGCCGAGTGCACCGCCGACGACAACGAGCCCATCTGCACCTGCTTCACAGGTAATTAAAAAACTCCTCACCGAATAATCCATTGATTCTGACTTTTCTCGCACATCACGTTCACATTTCACTGTACATTTTGATAGCTAAAATCCCTTAATTTTTAGTCATAACGACATAACGTGGAGTCTGACCCACACGTCATTGACACATTATCCGTCAAATGTGTTTAGGTTTTGAGCCAAAATCTCCGCAAGAGTACAACAACGGCAACTGGACGCAGGGCTGCGTGAGGAGCGTTCCACTGACGTGCAGCAGCGAGAGGAACAACACGACCGCCGGTGGCGGCGACGGGTTCACCGTCATCCGGGGCGTGAAGCTGCCGGACTTCGCCGTGTGGGGATCGCTGGTGGGCGACGCGAACTCGTGCGAGAAGGCGTGCCTGGGCAACTGCTCGTGCGGGGCGTACAGCTACAGCACCGGCAGCTGCCTCACCTGGGGGCAGGAGCTGGTGGACATCTTCCAGTTCCAAACCGGCACCGAGGGAGCGAAATACGACCTCTACGTCAAGGTCCCATCTTCTCTATTAGGTGAGAGTTTAATCTATATTTTACCAATATTTCGTACTCCTTCCGTCTAAGAAAAAATCAGCTTCTAACAACAATTTAAAAATAGATTATGTTTAGATTTATAACTAGAAGTTAGGTTTTTCTTTTCTTTTTCTTTTTACATATGGAGTATTTGTGTTGTGTGAAGTTTAATTTACAGTTTTAAGTTTTTTTAAAAAAAAATTCATGAGTCGACATATAACACATACGTCGCACTCACACCATAACATACACTCACATGTGCATACACGCTTTATTAGAATTCAAAGACAGAAATTTCGCTGGAAAAATCCAAACGAGTTAAATGACTGACAGTTCCTGATCTGACAAATACACTACTAGATGCCAATTATTTGCTTGTTTTAAGAATGAATAAGGCATCGCATTTCGTTTTCTAGAAAAATTAGAAAATTGTTCAGTTCACTGGAATCTTTGGCATGTGGTCGAACTGAAAATGGCATTAGAAAACGCAGCATCAATCCGGTGCAGATGCGTGTGAGGTTGTTGGATCCTGAATTCCTGATTAGGTAGATAAGCTCCCATTTATGCAGTCCACGGAATAAAATTCACCGGAGTAGACGAGTAAAAGATGGTGGCCAATTTGGATTGGTGAACAGTGAATGTTGAAAAGGGGGGTGAAAATTGAAGTCTGAAACAGCCAACGTTTCACATTTTCACCCCCCGGAAAACTCAAAAGCATATCCATTTTCGCCCAAATATATCTTTACATGACATATGCAATGGAGATAAGCATTTCAGATGCTAATGTCACCCATCTGTAACGCATTGTCACCTGTCATTGTTACCCAATGCATTATGAGATACGAGAGGCACGTCGAATCGTCGATTTGAAGGTCTATGTAAAAATTTTTCTGATGGTGACTTGTGGGATTTATTATGCAGTGCAGGCCGTTTGTTTCGGATGCCGACAGCTTCCGGAAAAGTACGGTGTATGCCTATTATTTTTGTTTGGTTTAAAGATTGTTCCGACAATGACAGATCTTTATCGCTCTAGATCAACTAGATTATCTCAAATTGGGAAAAGAATACCATCTTGCGGCTGGGCGAGAAGGACCTAACTGTTTTAAATTATTCCTTTTTCTTAGCTTTTTTAGATGAGGACATGAGGTGGCTACTTTCACGAATTTTTTGTCGTGGTTAGCAGTTTTAGCACACAGGGAACATGTGGGACAAATCGTGTGTTTGACCCATGTAGGTCAATCAGTCTGACCACACATGGTGATCATTAGTTTATCATATGACCTGATGATGTATGTGAATGCACGTTAGTATTTGGCTGAAACGCACGAAGGTCTTCAGAAATCAAATCTTTGAAACTGACCGATTCTTCAAACTGATTTTATCTTCTAATGACATTATGAATTCATTTGCCTGGCAGCTACACATTTCTGACAAATTTTGCTGTTATGTTTGACCTCAGATAAAAGCTCGGGGCGATGGAAAACCGTTGTCGTCGTCGTAGTTGTGGTCGTGGTGGTTGTATTGCTGGCATCAGGCCTTCTCATGTGGAAGTGCAGGAGACGAATTAAAGGTGAGTTAGGAATTAGTACATGCCTAAATCATCATTAAACTTGAATTGCACTAGAATTTGAGATGTAAAACTTTGAAACGAATATCAAATAGCGGCATGTCAGTTCACATGACGGAGTCGGTTTATCTTGTCGCAGAGAAACTTGGCATTGGTAGGAAAAAGGCACAACTCCCGTTGCTGCGTCCTGCGAGGGATGCAAAGCAGGATTTCTCAGGGCCAGCGCAATCTGAACACGAGAAATCAGAGGAGGGCAAGAACTGCGAGCTGCCGCTGTTCGCGTTCGAGACCTTAGCGACGGCCACCGACAACTTCAGCATCTCGAACAAGCTCGGAGAGGGAGGCTTCGGCCATGTCTACAAGGTACACGCAGCTAGAGATCGATATCATCATGTTCTAATCACATGCCAGAATTAATGCACCAATGTTGGAGAGTACTAATGAGGTTGCATGGATGATTGGTTTGGTTCTTTTCAGGGAAGGCTCCCTGGAGGAGAAGAGATCGCGGTGAAGAGGCTGTCCCGGAGCTCCGGGCAGGGGCTGGAGGAGTTCAAGAACGAGGTGATCCTGATCGCGAAGCTGCAGCACCGCAATCTTGTCAGGTTGCTGGGATGCTGCATCCAGGGCGAGGAGAAGATACTGGTGTACGAATACATGCCCAACAAGAGCCTCGACGCCTTCCTCTTCGGTACGTACACCCTCAGAATCCAGCAACATTTTTCTTGCAAAATTCAGAGAGTTCAGAGAGACAGTAATAAGCTGACACTGGCAGTGTGTGACTGTTTTGCTATGTCATGTCAGATCCGGAGAGAAGAGAGCTCCTGGACTGGAGGACGAGGTTCCAGATCATCGAAGGCGTGGCGCGAGGGCTCCTGTACCTCCACCGCGACTCGAGGCTCCGCGTGGTGCACCGCGACCTCAAGGCCAGCAACATCCTCCTCGACCGCGACATGAACCCCAAGATCTCCGACTTCGGCATGGCCAGGATCTTCGGCGGCGACCAGAACCAGGTCAACACCAACCGCGTCGTCGGCACACTGTAAGCAAAAAAGCACCTGAGCACAACAGCAACTCTGACACTGTAACACACTGAGGTTAATTACTTTACATGTCGCCGTGACACAGGGGCTACATGTCACCGGAGTACGCGATGGAGGGGCTCTTCTCGGTGAGGTCGGACGTGTACAGCTTCGGCATCCTCATCCTGGAGATCATCACGGGCCAGAAGAACAGCAGCTTCCACCACATGGAGGGCTCCCTCAACATCGTCGGCTACGTAAGCGCACGCACACACACAAATCCTCCCTGCAATCTTACTCACATTCTTGTCAAAAAAAAGTTTGCTGATCGAGTTGCGTTGCGTCTTGGGATATTGACAGGCGTGGCAGCTGTGGAACGGGGACAGAGGGCAGGAGCTGATCGACCCGGCGATCCGGGGGACGTGCCCCGCGAAGGAGGCGCTGCGGTGCGTGCACATGGCGCTGCTGTGCGTGCAGGACCACGCGCACGACCGCCCGGACATCCCCTACGTGGTGCTCACGCTCGGCAGCGACTCCTCCGTGCTGCCCACGCCGCGCCCGCCGACGTTCACGCTGCAGTGCACGTCGTCGTCGTCGGGGCGGGACATGTACTACAGGGACAAGGAGGAGTCCTACTCCGCCAACGACCTCACCGTCACCATGCTCCAAGGCAGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024123