Os12g0117800

From RiceWiki
Revision as of 10:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0117800| Description = Protein of unknown function DUF1191 family protein| Version = NM_001072536.2 GI:297612553 GeneID:4351337| Length = 1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0117800

Description

Protein of unknown function DUF1191 family protein

Version

NM_001072536.2 GI:297612553 GeneID:4351337

Length

1916 bp

Definition

Oryza sativa Japonica Group Os12g0117800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:875331..877246

Sequence Coding Region

875714..876652

Expression

GEO Profiles:Os12g0117800

Genome Context

<gbrowseImage1> name=NC_008405:875331..877246 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:875331..877246 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatttcttggcctgcgtctgcctcctccacctgctcttcttggccacttcccgggtggcggcgcaggcgtcgtcgccggccagggccctggacgcaatgctgcaggaccacgcgtaccgggccttcgtgcacccgcacactggcattgtctacaacgccaccgtcccggccaacctcaccggcgtcgccctgtccgcggtccgccttcgcagcggcagcctgcggaggaaaggtttctccgactacttcgacttcaccgtccccaccggcatcgtcgtgcagccgtacgtcgagagggtggtgctcgtctaccacaatctcggcaattggtctgaccactactacccgctgcccgggtacacatacctctcgccggtgctcgggctgcttctctacgacgcggccaacttgtcggcggtggggttgcaggagctgagctttgtcgcctccgggagcccaatttctataaatttcagtgatgttagatcggtgccggcaggcggtccagctcctcggtgcgtgtggtttgatttggatggtgtgccacaattccgggacttagaggcaagcaatgtgtgctcgacgtaccgccgagggcatttctcgatagtggtgaactctagcgcgattcctcctggtccagtgccttcaggcaacattacaccgccaataccgactcctacaggtcgttctaagggcagctccaaggggtggaagattgctgttggcgtggttgggggcgtcatagcattggtcctgttggcgtcgcttgtggtttgtttggcaaggtacaaaagagataagaaattggaactgatggaacagaatgcagagactggggagacattgcgtatggcacaggttgggaggtcacaagcgcctgtagcactggggacaagaacacaaccggtgattgagagcgagtatgttgcatag</cdnaseq>

Protein Sequence

<aaseq>MDFLACVCLLHLLFLATSRVAAQASSPARALDAMLQDHAYRAFV HPHTGIVYNATVPANLTGVALSAVRLRSGSLRRKGFSDYFDFTVPTGIVVQPYVERVV LVYHNLGNWSDHYYPLPGYTYLSPVLGLLLYDAANLSAVGLQELSFVASGSPISINFS DVRSVPAGGPAPRCVWFDLDGVPQFRDLEASNVCSTYRRGHFSIVVNSSAIPPGPVPS GNITPPIPTPTGRSKGSSKGWKIAVGVVGGVIALVLLASLVVCLARYKRDKKLELMEQ NAETGETLRMAQVGRSQAPVALGTRTQPVIESEYVA</aaseq>

Gene Sequence

<dnaseqindica>595..1533#actctcgccatcaaatccccaaacccctcctccttctctccaagtcctcgtcttggttgtcgcaatcattcgtggggcgcgttaatccctccccaaattctgtggcagccagcttccccgcttgcttggattggatttctccaagattgattcgttccctcccaattcttcacttcctctatccatttccaatccaatcttggttttttgcattgtttcctcccgatttgtcttcctctcgctctccctctcccaccatatcttggactcggtcctatctgtccgtgcctcgcttccatcgccattgctcttttgctgctaaagtcttctctttggagggagagactgggactgggagctagctcgcccttgtgttgttcagggagtaaatgcgcgtccttggtggtgcttggtcccagcattttccgccccaaatctcgtccttgctgccccgacttaagtggtggagattccgtcaccggcggtcgtagatgaggaggaggagatcctcctcctgatctactcttcttcttcttcttcttcttcagctcctggctgctgctgctccactccccctgatccccctgcaggagcatggatttcttggcctgcgtctgcctcctccacctgctcttcttggccacttcccgggtggcggcgcaggcgtcgtcgccggccagggccctggacgcaatgctgcaggaccacgcgtaccgggccttcgtgcacccgcacactggcattgtctacaacgccaccgtcccggccaacctcaccggcgtcgccctgtccgcggtccgccttcgcagcggcagcctgcggaggaaaggtttctccgactacttcgacttcaccgtccccaccggcatcgtcgtgcagccgtacgtcgagagggtggtgctcgtctaccacaatctcggcaattggtctgaccactactacccgctgcccgggtacacatacctctcgccggtgctcgggctgcttctctacgacgcggccaacttgtcggcggtggggttgcaggagctgagctttgtcgcctccgggagcccaatttctataaatttcagtgatgttagatcggtgccggcaggcggtccagctcctcggtgcgtgtggtttgatttggatggtgtgccacaattccgggacttagaggcaagcaatgtgtgctcgacgtaccgccgagggcatttctcgatagtggtgaactctagcgcgattcctcctggtccagtgccttcaggcaacattacaccgccaataccgactcctacaggtcgttctaagggcagctccaaggggtggaagattgctgttggcgtggttgggggcgtcatagcattggtcctgttggcgtcgcttgtggtttgtttggcaaggtacaaaagagataagaaattggaactgatggaacagaatgcagagactggggagacattgcgtatggcacaggttgggaggtcacaagcgcctgtagcactggggacaagaacacaaccggtgattgagagcgagtatgttgcatagatgttttcttgacatttcagcggaattcaggcaacaagggtaaccagttatgctggcaagcatgggattgctcttcggtcggatgaggcaacaagtgttccatatcaatgagtgcggcacaaattgctagatgtagggcatagtcttggctcatgagacttaacacattcttttaacagttttgtttggagggttatttgttctacaatggctcatgttgatgttcataattgccatgttcatagtggggagctcttttcatctccaagcaagcaatggggaagaaatggttgttgtgtcagatttggaatcccttattttttggattgctgtattcaaaaggatataggcttggcaataaaggtgagggaattttattgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0117800, RefSeq:Os12g0117800