BGIOSGA024158

From RiceWiki
Revision as of 06:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024158| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024158, complete gene.| tag = P0458H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA024158

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024158, complete gene.

LocusTag

P0458H05.109

Ensembl Transcript ID

BGIOSGA024158-TA

Ensembl Protein ID

BGIOSGA024158-PA

Length

5199

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19381715..19386913

Sequence Coding Region

19386883..19386913,19386190..19386254,19385880..19385933,19384842..19385727,19383271..19383411
,19383046..19383176,19382749..19382959,19382418..19382655,19382168..19382318
,19381715..19382065

Genome Context

<gbrowseImage1> name=IndicaChromosome07:19381715..19386913 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:19381715..19386913 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAATTTTTGTATTTTACATCCAAAAGGATGTATTATGCTCTACAGACTACTGGAGTACAATATATCAGCTTCGCTTAAGCTATCTCTAAAGTTCTTGCTATATTGGACAAAGGCTCTTAATGACGATGTTTGGCAGGAGGCTCAGCTAGCTCTCTGCTCCGCCATGTGCCGCGGATCAGTCCTCCTCCTCCGTGTCCATGCCGCGCTGCTTCTCCTCGCGGCGCTCCCGGCGCTGATCGCCGGCCAGCCGTGGGAGATATGCGGGGAGAACGGCAACTACACGGCGAACAGCACCTACCAAGCCAACCTCAAGCAGCTCGCCGCGGCGCTCCACAAGAACGTCTCCTCCGGCACCGGCGGCGGCCGCCTCTTCGCCTCGGGCGCCGTCGGCGCCGTGCCGGACGCCGTCTACGCGCTCGCGCTCTGCCGCGGCGACATCAACGCCTCGGCCTGCGCCGACTGCGTCGGCACCATCTTCCAGGACGCGCAGCAGCTGTGCCCCTACCGCAAGGAGGTGTCCATCGTCTACGACAGCTGCTACCTCCGCTTCTCCAACCTCGACTTCCTCTCCTCCGCCGACAACTCCGGCGTCGTCGACCTCTACAACACCGGGACCGTCTCCGGCGACGTCGGCCGCTACGACCGCGCGGTGACGGGCCTCCTCAACGCCACGGCCAGGTACGCGGCGGGCAACATCAACGCGTCGTCCAGGCTGTTCGCGACGGGGGTGATGGTCGGGTTCGACGCCCAGTTCCCCAAGATCTACGCCATGGCGCAGTGCTCGCCGGACCTGTCGCCGGCGCAGTGCGGGCTGTGCCTCGGCGCCATGGTGGCGCGGTGGTGGCAGACGTTCGAGCCCAACACGCAGGGCGCCAGGAGCGTCGGCGCGCGCTGCAACATGCGGGTCGAGCTGTACTCGTTCTACAACGTCCCTTCCATGCTGCAGCTGCAAGCCGAGGCCGTCGCGCCGTCGCCATCGCCGGCGCCGGCGCCGGCAGGGAAGCCACCTGCTGTGCCGGGCACTACAGGAGGGAAAAGGAGAAACGGAGCAGGTAAAGTTCTTGCAATTGTAATGCCTATAGTTGCTGCCATACTGGCAGTCACTGTAATTGGCTTTTGTTTCTGGAGGAGGAAAAGACCAGAAAAAACACCTCCACCAGGACCGCTCCGATCCGCATCTCGTTCGGAGGACTTTGAGAGTATTGAGTCACTTTTTCTTGATCTATCAACACTCCGAATCGCAACAGATAACTTCTCCGAAAATAACAAACTTGGTGAAGGAGGATTTGGTGTTGTTTATAAGGGATCCCTACCTCATGGTGAAGAGATAGCAGTAAAGAGGCTCTCACAAAGCTCTGTGCAAGGAATGGGGGAGCTGAAAAATGAGCTGGTTTTGGTTGCCAAGCTCCAGCACAAGAATCTTGTCCGTTTGGTCGGTGTTTGTCTAGAAGAGCATGAGAGGATGCTTGTCTATGAATACATGCCCAATAGAAGCTTGGATACCATTCTTTTTGATGCTGAGAAAAGCAGTCTGCTAGACTGGGGAAGAAGGCTGAAAATAATAAACGGAGTCGCTCGAGGAATGCAGTATCTCCATGAAGATTCCCAGCTGAAGATCGTTCATCGGGACCTTAAGGCAAGCAATGTTCTTCTAGACTCTGATTACAACCCCAAGATTTCAGACTTCGGCTTGGCGAGGCTCTTCGGAGGCGACCAAACACAGGACGTCACAAATCGCGTTGTCGGGACATATGGATACATGGCGCCAGAGTACGCGATGCGTGGGCACTACTCCGTCAAGTCAGACGTGTTCAGCTTCGGCGTCCTGGTCCTGGAGATCGTCACGGGGAGGAGGAACAGCGGCTCCTACTACAGCGAGCAATCCGGTGATCTCCTAAGCATCATATGGGAGCACTGGACCATGGGAACCATCATGGAGATGGTGGACCGGTCCATGGGCGAGCGCGCGGCGGGCGGCGAGATCGCGAGGTGCATCCACGTCGGGCTGCTCTGCGTGCAGGAGAACCCGGCGAGCAGGCCGGCCATGTCGGCGGTGAACGTGATGCTGAGCAGCGGCACGGTGTCGCTCAAGGCACCGTCCAGGCCGGCGTTCTACATCCGGAAGGGCAGCGGCGACGACGGCGGCGGCACGGGGTCGTACTCGGGGTCGTTCGTCGGCACCTTGCCGTCGTCCGGCAGGTCGGCGCCCATGTCGCCCAACGAGGTGTCCATCACTGAGCTCGAGCCGAGATAA</cdnaseq>

Protein Sequence

<aaseq>MANFCILHPKGCIMLYRLLEYNISASLKLSLKFLLYWTKALNDDVWQEAQLALCSAMCRGSVLLLRVHAALLLLAALPALIAGQPWEICGENGNYTANSTYQANLKQLAAALHKNVSSGTGGGRLFASGAVGAVPDAVYALALCRGDINASACADCVGTIFQDAQQLCPYRKEVSIVYDSCYLRFSNLDFLSSADNSGVVDLYNTGTVSGDVGRYDRAVTGLLNATARYAAGNINASSRLFATGVMVGFDAQFPKIYAMAQCSPDLSPAQCGLCLGAMVARWWQTFEPNTQGARSVGARCNMRVELYSFYNVPSMLQLQAEAVAPSPSPAPAPAGKPPAVPGTTGGKRRNGAGKVLAIVMPIVAAILAVTVIGFCFWRRKRPEKTPPPGPLRSASRSEDFESIESLFLDLSTLRIATDNFSENNKLGEGGFGVVYKGSLPHGEEIAVKRLSQSSVQGMGELKNELVLVAKLQHKNLVRLVGVCLEEHERMLVYEYMPNRSLDTILFDAEKSSLLDWGRRLKIINGVARGMQYLHEDSQLKIVHRDLKASNVLLDSDYNPKISDFGLARLFGGDQTQDVTNRVVGTYGYMAPEYAMRGHYSVKSDVFSFGVLVLEIVTGRRNSGSYYSEQSGDLLSIIWEHWTMGTIMEMVDRSMGERAAGGEIARCIHVGLLCVQENPASRPAMSAVNVMLSSGTVSLKAPSRPAFYIRKGSGDDGGGTGSYSGSFVGTLPSSGRSAPMSPNEVSITELEPR</aaseq>

Gene Sequence

<dnaseqindica>1..31#660..724#981..1034#1187..2072#3503..3643#3738..3868#3955..4165#4259..4496#4596..4746#4849..5199#ATGGCGAATTTTTGTATTTTACATCCAAAAGGTATGTTTGAAAATATCATATATATTTTTCTAATTATCTCTAATTTCTATACACATTAAGTGTTTTTCAATTTGTTTTTAGCATTGTTCTGTTCTGCTACACAAATCACGGTTACCATGCAAATATCAAGGTTACAACGCCAAACCATGCGGTAACTGTGTCCAAACCGCGAAATCACCGAATTTTTGAATTCAAATGTTTGACGATGAATTTCACAAGGTTTTCAGTAACCGCCCCCCTCCAAACGGTAAGGAAAACACTGCTGGTAGCAGGTGTTCAGTTCTGTTAATGGATGAATCAGGAAAGATGTGCCACGTATACTGAGTTTGACTCGTTCAATTATGTGCTAGTTGTGCTACTAGTTAGCTGCACCAAACGGAAGTGTTCTCATTGAGATATGTATGATACATGGAAAACCCTGTCATAGGCTGACCATTCTGGGGATACCATTTACTTGTTCGCACTACAAAACACTCATGTGCTGTGCAGTCTGAATGCACTGGCTGCCTGGCACTAGTAGCTCTGGAAAGCTTCAGTTTGGCTTCTTTGATATCTTGTTTGCATCTCCCGTGTACTGTACATGTAAATATGAGTGCGCACTGATCATTGTATACAAATCATTTTGTAGGATGTATTATGCTCTACAGACTACTGGAGTACAATATATCAGCTTCGCTTAAGCTATCTCTAAAGGTTTGTTAAGACTTAAGAGTCGCCACGGGATTTGTATCATTGTATGGAAGAAGGCGCATGGTACCGAGGATGAGAACGGGGGAACATCATGCGGAAAACTGGTGTGGAAGGGGCGCGTTTGTGTTGTTTGGTATGCGATGGACAAGGCTGAGCTGCATCACCATCAAGGCATCAAGACCTGCATTTGTTTTCTTTGTTGTCATCATCCTTGCCGGACTCGTCCTTATTTGTTATTCCCACGATGTTATTTGTTCAGTTCTTGCTATATTGGACAAAGGCTCTTAATGACGATGTTTGGCAGGAGGCTCAGGTGGGCCCACCGAGACTCGCACAGGTCAAAGTCAACACACGACGAAATCAAACAGTAAAACAATCTGAGGAGAGTGAGGCAGAGAGAGCAGAGTGATTCGAGAGCAAGAGCAAACCACCTTCTTCTTCTTCTCTTCTTCCTCTGCACTGCAGCTAGCTCTCTGCTCCGCCATGTGCCGCGGATCAGTCCTCCTCCTCCGTGTCCATGCCGCGCTGCTTCTCCTCGCGGCGCTCCCGGCGCTGATCGCCGGCCAGCCGTGGGAGATATGCGGGGAGAACGGCAACTACACGGCGAACAGCACCTACCAAGCCAACCTCAAGCAGCTCGCCGCGGCGCTCCACAAGAACGTCTCCTCCGGCACCGGCGGCGGCCGCCTCTTCGCCTCGGGCGCCGTCGGCGCCGTGCCGGACGCCGTCTACGCGCTCGCGCTCTGCCGCGGCGACATCAACGCCTCGGCCTGCGCCGACTGCGTCGGCACCATCTTCCAGGACGCGCAGCAGCTGTGCCCCTACCGCAAGGAGGTGTCCATCGTCTACGACAGCTGCTACCTCCGCTTCTCCAACCTCGACTTCCTCTCCTCCGCCGACAACTCCGGCGTCGTCGACCTCTACAACACCGGGACCGTCTCCGGCGACGTCGGCCGCTACGACCGCGCGGTGACGGGCCTCCTCAACGCCACGGCCAGGTACGCGGCGGGCAACATCAACGCGTCGTCCAGGCTGTTCGCGACGGGGGTGATGGTCGGGTTCGACGCCCAGTTCCCCAAGATCTACGCCATGGCGCAGTGCTCGCCGGACCTGTCGCCGGCGCAGTGCGGGCTGTGCCTCGGCGCCATGGTGGCGCGGTGGTGGCAGACGTTCGAGCCCAACACGCAGGGCGCCAGGAGCGTCGGCGCGCGCTGCAACATGCGGGTCGAGCTGTACTCGTTCTACAACGTCCCTTCCATGCTGCAGCTGCAAGCCGAGGCCGTCGCGCCGTCGCCATCGCCGGCGCCGGCGCCGGCAGGGAAGCCACCTGCTGTGCCGGGCACTACAGGAGGTTAGCTTAGCTGACTTTACTACTATGCATATTAATTAGGAGTACTCTGCTTCCATCTTTTGTTCTCTGAAAATTATTGTACCTAGTGTGATGCTGGACGTATGATAGCTTAACTAATGCTATTATAATTTTGCAAAGTTTGAGATATACCATCGGTATCTCAATAACATGTAGGACCCACATGGGTCAGGACGGCATGGTTCCAATTTTGCAAAATTATAATGACATGGTTTCAATTTTCCCTTTTAGGTTAAGTACAGTTCAGAATTTTCATCACGCCAACTAATGCATAGTTTAAGCAAGAAACGTCCGAATTTCTCTTGGTATTAACTAGATGAATGCCTAGATTTTCCATGATTCGATCCAGACCTGTTGCTGTCATGCTAGTTAGCGTATAGTTCACTACTATTCCGTACTAGTGTATACTAGTACTCCTATCATACAGTTGACTAAGTCTACTTTTTCCACCGACTAATTTCTTAGAGACATTTTTATTTAGGGAATATAATCTCGAAATCAACCTAATCCACAAGACAAAATTGTGCAATATGATACTAGTAATACGTGCTTGGTTTCTCTGTATGTGATTCAATTATCTGTCAGTCGCCTAACTTTCAGTTGTTTGATCAGCTAGTAGTTAAGTGAATGCAAGGAAAAAAAAAGGCACTCTCTTCTTACTCTGAAAATTTACACCATCTTTTCTGAGAAGAATCTTGTGTCATGTATTTTTCTGTTTGTTTGGGAACAGTTGTCTATCTTTTCGTCTTCTGCTTACTGTTCTAGATTCAGTAACTGCAGGCAGCACCACATGTGCAATGGCAATCTAGAAGCTATGACTTGTAGTCATGTTTATATATGGGGATATAAACACAGGCATACAGCTGTTACCAACTTTAGATTGTCAAATTGGTAGTTTGTAGTTTCGACTAGATATTGTTATTAACATTAGTTAGTTTATGCATTTCACTCAAGCAATGGGAATTAGAGTGGAGCACTAGTCAAGAAAAGCTAACAGTGAGTGTTATGACCATAATGCATAACATTGATAGGCCAGTGCCAAACTGCCAATGTGATATCATGATTCATTACCTATCTGGAATGCCATTTTAGACCCAAAATAAAAATAGGCGTGCAATAATGATCTTGCAGAATGCTGGGTTAGCTTATCTGAAAGGCTATCCTTGCTAGTTGCTTACTGTTCAACACCAAATGGCAATTTTTACACAAAATTTGAGTTTTCGGAGGCAAATATTTCACACAATCTCTATCACATGGAAAATTTCAAAGAATCTGCAATCGCTATCTTACTTTTCAAGTGTGAACTCATCATCAGTTCCTCCTGGTTTGCTTTCTGCTAACCGTGTCTTGAGAATCTTTCACCACAACCATACTACTTTTTTCCCATGTGTAATACGGAGTATAATCTACAGGGAAAAGGAGAAACGGAGCAGGTAAAGTTCTTGCAATTGTAATGCCTATAGTTGCTGCCATACTGGCAGTCACTGTAATTGGCTTTTGTTTCTGGAGGAGGAAAAGACCAGAAAAAACACCTCCACCAGGACCGCTCCGATGTGAGTCCCCTGAAGTCTGAGCACTTAAAATCATGTGGTAACAAATTAAATGATTCATTTGTTCTGTGTTCACTTTATAATTGATCTATGGCAGCCGCATCTCGTTCGGAGGACTTTGAGAGTATTGAGTCACTTTTTCTTGATCTATCAACACTCCGAATCGCAACAGATAACTTCTCCGAAAATAACAAACTTGGTGAAGGAGGATTTGGTGTTGTTTATAAGGTATTGATAGGCTTCTAGCATCTTTATCGCAACAAAAGTAAGTAGAACCTGCGCCAGATAACAGGTATATATATTCATTTGTGCAGGGATCCCTACCTCATGGTGAAGAGATAGCAGTAAAGAGGCTCTCACAAAGCTCTGTGCAAGGAATGGGGGAGCTGAAAAATGAGCTGGTTTTGGTTGCCAAGCTCCAGCACAAGAATCTTGTCCGTTTGGTCGGTGTTTGTCTAGAAGAGCATGAGAGGATGCTTGTCTATGAATACATGCCCAATAGAAGCTTGGATACCATTCTTTTTGGTGCATTTCCCCTCCATGCATTCTAAAAATTTGTCAACATTAATTTGCACAAGTAATTCATGTCCCCTGATGCTTCTCATTTTCATGAGACAGATGCTGAGAAAAGCAGTCTGCTAGACTGGGGAAGAAGGCTGAAAATAATAAACGGAGTCGCTCGAGGAATGCAGTATCTCCATGAAGATTCCCAGCTGAAGATCGTTCATCGGGACCTTAAGGCAAGCAATGTTCTTCTAGACTCTGATTACAACCCCAAGATTTCAGACTTCGGCTTGGCGAGGCTCTTCGGAGGCGACCAAACACAGGACGTCACAAATCGCGTTGTCGGGACATAGTAAGCACATCCAGTCATCCATCAACACCCATGACAGACAGATCAAAGATTGTGCATCAGATATCGTCAAAGTTAACCATGTTCTTAATTTATCTGCAGTGGATACATGGCGCCAGAGTACGCGATGCGTGGGCACTACTCCGTCAAGTCAGACGTGTTCAGCTTCGGCGTCCTGGTCCTGGAGATCGTCACGGGGAGGAGGAACAGCGGCTCCTACTACAGCGAGCAATCCGGTGATCTCCTAAGCATCGTGAGCACCACCAACTTCTTAGCTCAATTTGAGCAAACCAACATTACATTTCTCGCAGTGACAATTCAGTAAAAAAAATGGTGATCTCTGACGACGATGCAGATATGGGAGCACTGGACCATGGGAACCATCATGGAGATGGTGGACCGGTCCATGGGCGAGCGCGCGGCGGGCGGCGAGATCGCGAGGTGCATCCACGTCGGGCTGCTCTGCGTGCAGGAGAACCCGGCGAGCAGGCCGGCCATGTCGGCGGTGAACGTGATGCTGAGCAGCGGCACGGTGTCGCTCAAGGCACCGTCCAGGCCGGCGTTCTACATCCGGAAGGGCAGCGGCGACGACGGCGGCGGCACGGGGTCGTACTCGGGGTCGTTCGTCGGCACCTTGCCGTCGTCCGGCAGGTCGGCGCCCATGTCGCCCAACGAGGTGTCCATCACTGAGCTCGAGCCGAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024158

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA024158&oldid=49752"