BGIOSGA024211

From RiceWiki
Revision as of 06:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024211| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024211, complete gene.| tag = OsI_262...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA024211

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024211, complete gene.

LocusTag

OsI_26233

Ensembl Transcript ID

BGIOSGA024211-TA

Ensembl Protein ID

BGIOSGA024211-PA

Length

5205

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:18248510..18253714

Sequence Coding Region

18253635..18253714,18252731..18252799,18251073..18252613,18250101..18250981,18248510..18248590

Genome Context

<gbrowseImage1> name=IndicaChromosome07:18248510..18253714 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:18248510..18253714 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCCACGAGATCGAGGAAAAGGTGCGCGCGCGTGGCAGACGCAGATCTACTCCCCCCGCCGCGCCCGCGCCCCTGCCAGAATTGGATTTACAAACTGAGCATAGCCTAGAAGGATCTCCACCACCTTTCCCTTGGCAAAACAGAAGGATGGCAGGAGTAGGACTGGTAGTTGGAGGATGGATTGCAAAGGCAGTGATTGCCAATATCTTGTCCAGAGTACGCTCCCTCCTCCACGATAATTTCAGTCTGCAAAAGGACACTGAAAAAATGCTGAATGACTTGGAGGTTGCGCTTCCTCGCATTGAGGCGGTGATTGAAGCAGCGGAGCGGAGATCAATTGAAAGCAGTGCCCTTTCCACATGGTTGCAGCAGTTGAAGGATGCTGTTTCCCATGCAGGAGATGTGGTTGATGATTTTGAAGCCAAGACAATTAAAGATCAGGTCGAAAGCAAGAGCAAGGTCAGTGCAAAGGCATACTCTACCGTCAAGGCTTTGAAGGCTTTGGTCTTTTCTGATAGTGAATTGAAGAAGCTGAAGCATGCTGTAAGAAGACTTGAAAATGTATCGACGAGAGTTGATTCTTTCATTGAATTGGTCAAGCTAAATGATGATGATACAGTGGGAAGGATTGGCCATAGCTTGCATAGTGAGACCAGCTCTTTACTTGGTGACACCAAAGTAATTGGTCGGGATGAAGAAATCAGCCTGATATTGGACATCATATTGGGTTACCGCTACCACTTGCCAAGAACTAGTGAGCATGCACGACCTGATGATCAACCAGAATTTGGTCAAAGGGGAACACTTTTTGACAAATTACGGAAGATTTTCCTTACTGGAACTGCTGAATCTAGTAAATCGAGTGATAAGGCTAAACTTGAAGAATTAGAACCAAGAAAGAAGGGAATCAAAATTGAAGAAGTAGATCCTAGCAAAGATTGTATAGAAATTGGAGAATACGAACCTAATCAGAAGGGACAGACTGAAATATTAGATTATACTAGTTCTGATGTACATGAAACCAGTGGTTCATCTCGAAACCTTGGCATCCTTCCCATAGTTGGCATTAATGGAGTGGGAAAAACAACTGTGGCTCAAGCTGTCTTCAACAATACGAGGGTAAAAATGTACTTTGATCTAAGAGCATGGGTCTATGTGTCAGACAACATAAGTGGGAAACAAATTGTACAAAGGATCATCATGTCTTTGGAACCATGGAGTGGAGTAACTGATGCTGCACTTGATTTGGATAGTCTTCAGCACAAACTTATTGATATCATAAGGTCTAAGAGGCTTTTGCTTGTACTCGATGGTGTAAGTGATGATATAATCATTGTATGGAGTCAGCTACGAAGCATCCTACGCTGCAGTGAACCTCAAAGTATGGTTTTGGTGACAACCCAGAAGTACAGCATAGCAAATTTGGTAGGGACAATGGGTCCAATAACTTTGAATACCCTAGGACAGACTGACTTCAGGTATCCTTTTGAGCACCTTGTGTTTGATGACTGCTTCTATCATCATTATGAAGTACACCTCTTTGAATCAGTATGTGAAAAAATAGCCGATAAGTTCCATGGGCTGCCGTTGGCAGCCAAGACAGTTGCACCATTATTAAGGGCCAATAGAAATATGGGATATTGGGAAAATGTCCTGAGAAGTGATTGGTGGAATATTGCTGATCATGGAACTGTCTTTGAAAAGGAAAGAGTGGTTCAGATGTGGGTGGCACATGGGTTCATTCAGTCTAGTAATACAGGGGATATCCTTCCAGAGAATGTTGCGAACAATTGGTTTGATGAACAAGTTGATAGGTCCTTCTTGCAGCCAACAGTCTGGCAAGGCCGTTACGTCATGCATGATTTAATAAGAGAGTTCTCATTTGCTGTTTCTTCCAATGAATATTATGTCTTTCACAGGAATTCCAAGGTTCTCCCACAATTTGCTAATCATATTTCTGTTGATAACGATAATTTCGATCTTCAATGGGGTCATTATGACCATAAAAGATTACAAACTCTGATGTTTTTTGGTCATCACAGAGTTGACAAAAATTATGACACTCTTGGTAGTATAGTGAGAAAGTCAACTAGTCTACGTGTACTGGATTTGTCTTACATTTGCATGAGTAATGTGAGTCAGGCTTCATATATTCTCAGCAAGCTGTCACTTCTTCGATATCTTGATCTCTCTTTTACTGGTATCAAACATCTCCCGGAGGCATTTGGTAATCTATACCATCTCCAGGTACCTGATCTGCGGGGTTGTATAATTGAGAAGCTGCCAAAGAACATGAACAATTTGATCAATCTAAGGCACTTATATGCTGATTCACAAACAATCGCACTGATTTATGCTGTAGGTCAGCTGACAAAACTTCAGGAGTTACAGGAATTCAGAGTTAGGTTGGAGGATGGTTACAAGATAAATGAGTTAAGGGACATGAAAGACCTGAGGAAATTGTGCATTACAAATCTTGAGAAAGTCTCAAGTTTGCAAGAGGCTACAGATGCAAAGCTGGTGGAGAAAAAGTCCCTTGACTATCTGCAATTGAAATGGGTGTACCAGGAGAGAGGCATTGGTGGTGGGGATCAATTAAGAACCATGGTGGGATGGCATGCTGTGGTAGACAGAGCTACGGGGGCGTAG</cdnaseq>

Protein Sequence

<aaseq>MSHEIEEKVRARGRRRSTPPAAPAPLPELDLQTEHSLEGSPPPFPWQNRRMAGVGLVVGGWIAKAVIANILSRVRSLLHDNFSLQKDTEKMLNDLEVALPRIEAVIEAAERRSIESSALSTWLQQLKDAVSHAGDVVDDFEAKTIKDQVESKSKVSAKAYSTVKALKALVFSDSELKKLKHAVRRLENVSTRVDSFIELVKLNDDDTVGRIGHSLHSETSSLLGDTKVIGRDEEISLILDIILGYRYHLPRTSEHARPDDQPEFGQRGTLFDKLRKIFLTGTAESSKSSDKAKLEELEPRKKGIKIEEVDPSKDCIEIGEYEPNQKGQTEILDYTSSDVHETSGSSRNLGILPIVGINGVGKTTVAQAVFNNTRVKMYFDLRAWVYVSDNISGKQIVQRIIMSLEPWSGVTDAALDLDSLQHKLIDIIRSKRLLLVLDGVSDDIIIVWSQLRSILRCSEPQSMVLVTTQKYSIANLVGTMGPITLNTLGQTDFRYPFEHLVFDDCFYHHYEVHLFESVCEKIADKFHGLPLAAKTVAPLLRANRNMGYWENVLRSDWWNIADHGTVFEKERVVQMWVAHGFIQSSNTGDILPENVANNWFDEQVDRSFLQPTVWQGRYVMHDLIREFSFAVSSNEYYVFHRNSKVLPQFANHISVDNDNFDLQWGHYDHKRLQTLMFFGHHRVDKNYDTLGSIVRKSTSLRVLDLSYICMSNVSQASYILSKLSLLRYLDLSFTGIKHLPEAFGNLYHLQVPDLRGCIIEKLPKNMNNLINLRHLYADSQTIALIYAVGQLTKLQELQEFRVRLEDGYKINELRDMKDLRKLCITNLEKVSSLQEATDAKLVEKKSLDYLQLKWVYQERGIGGGDQLRTMVGWHAVVDRATGA</aaseq>

Gene Sequence

<dnaseqindica>1..80#916..984#1102..2642#2734..3614#5125..5205#ATGTCCCACGAGATCGAGGAAAAGGTGCGCGCGCGTGGCAGACGCAGATCTACTCCCCCCGCCGCGCCCGCGCCCCTGCCGTGAGTCAAGCGAGTTGAACAGTACACAGGAAATGGAGGAAGACCCGTCTCGCCTAGCGCCCCAAGACCCAAGTGAGTCAACTCTAATTTGCTCTGTAAATTTCCGGGCCTGGGAATTCCTTGGTTGTCCAGGCCTGGGAATTGCTTGTATCTGAAGAAAAGTTGCTCGTCTGATCCACGAATTTCTGTCCTTATCTTTGTGGTATAGTTCACACACGGGTGAGGTGATAGAACTCCAAGAAGAACTGGAGAATGGATTATCATAATTTCTGGTATACGTTTACTCGAATGCGTGACTACAATTTGGAAATTTCCTTGTTTCACACTAAGGTCTGGTTTAGTTCCCAATTTTTTCTTCAAACTTTCAACTTTTCCATCACATCAAAATTTTTCTACACACACAAACTTTCAACTTTTCCATAACATCGTTTCAATTTCAATCAAACTTCTAATTTTGGCGTGAACTAAACACACCCTAAGGTATGAAATACCCCCAAACTTTTTATAAGAAAATGAACATCTAACAGCACACGCTTTTGTTTTGGATGGAAGCTCATGTGAAGTTTCTAATCAAGACACCAGACACATCTAAAAGTGTGCCTGGAAGGTTTGATCTTATTTAAGAACCATTAGTTACATAGGGTCCAGTGACTTGGACTTATGTCACCCAAATAATCTTATCTTATGTTCCAGTGGTGGTTAGTGCCATCTACCAAAAACACAATTTCCCCGTCACTACCTCCAGTCCTCCACCAGTCCAACCCTCCAACTATATTGTCATCTACATCATACGTTTTCACAGTTTTGCAGTCTGACTTGCTCTTAGTTGTTGCAGAGAATTGGATTTACAAACTGAGCATAGCCTAGAAGGATCTCCACCACCTTTCCCTTGGCAAAACAGAAGGTCAGTTCAATGTTTCTACTCCATATGTCCATATGTGTGGATGTCCACTAAATTTGTGCTTTGGTCATGCCTATTCTGCTCTATTCTTACGTATTTGCTCTTCTACAATAAAATTAGGATGGCAGGAGTAGGACTGGTAGTTGGAGGATGGATTGCAAAGGCAGTGATTGCCAATATCTTGTCCAGAGTACGCTCCCTCCTCCACGATAATTTCAGTCTGCAAAAGGACACTGAAAAAATGCTGAATGACTTGGAGGTTGCGCTTCCTCGCATTGAGGCGGTGATTGAAGCAGCGGAGCGGAGATCAATTGAAAGCAGTGCCCTTTCCACATGGTTGCAGCAGTTGAAGGATGCTGTTTCCCATGCAGGAGATGTGGTTGATGATTTTGAAGCCAAGACAATTAAAGATCAGGTCGAAAGCAAGAGCAAGGTCAGTGCAAAGGCATACTCTACCGTCAAGGCTTTGAAGGCTTTGGTCTTTTCTGATAGTGAATTGAAGAAGCTGAAGCATGCTGTAAGAAGACTTGAAAATGTATCGACGAGAGTTGATTCTTTCATTGAATTGGTCAAGCTAAATGATGATGATACAGTGGGAAGGATTGGCCATAGCTTGCATAGTGAGACCAGCTCTTTACTTGGTGACACCAAAGTAATTGGTCGGGATGAAGAAATCAGCCTGATATTGGACATCATATTGGGTTACCGCTACCACTTGCCAAGAACTAGTGAGCATGCACGACCTGATGATCAACCAGAATTTGGTCAAAGGGGAACACTTTTTGACAAATTACGGAAGATTTTCCTTACTGGAACTGCTGAATCTAGTAAATCGAGTGATAAGGCTAAACTTGAAGAATTAGAACCAAGAAAGAAGGGAATCAAAATTGAAGAAGTAGATCCTAGCAAAGATTGTATAGAAATTGGAGAATACGAACCTAATCAGAAGGGACAGACTGAAATATTAGATTATACTAGTTCTGATGTACATGAAACCAGTGGTTCATCTCGAAACCTTGGCATCCTTCCCATAGTTGGCATTAATGGAGTGGGAAAAACAACTGTGGCTCAAGCTGTCTTCAACAATACGAGGGTAAAAATGTACTTTGATCTAAGAGCATGGGTCTATGTGTCAGACAACATAAGTGGGAAACAAATTGTACAAAGGATCATCATGTCTTTGGAACCATGGAGTGGAGTAACTGATGCTGCACTTGATTTGGATAGTCTTCAGCACAAACTTATTGATATCATAAGGTCTAAGAGGCTTTTGCTTGTACTCGATGGTGTAAGTGATGATATAATCATTGTATGGAGTCAGCTACGAAGCATCCTACGCTGCAGTGAACCTCAAAGTATGGTTTTGGTGACAACCCAGAAGTACAGCATAGCAAATTTGGTAGGGACAATGGGTCCAATAACTTTGAATACCCTAGGACAGACTGACTTCAGGTATCCTTTTGAGCACCTTGTGTTTGATGACTGCTTCTATCATCATTATGAAGTACACCTCTTTGAATCAGTATGTGAAAAAATAGCCGATAAGTTCCATGGGCTGCCGTTGGCAGCCAAGACAGTTGCACCATTATTAAGGGCCAATAGAAATATGGGATATTGGGAAAATGTCCTGAGAAGTGATTGGTGGAATATTGCTGATCATGGTTTGGGAATAAACGTTCTGCCGGCCCTAGGAATTGGATGCCTAAATGCAGCACTAAGGCAGTGTCTTCTGTTCTGCTCACTATTTCCAAGGAACTGTCTTTGAAAAGGAAAGAGTGGTTCAGATGTGGGTGGCACATGGGTTCATTCAGTCTAGTAATACAGGGGATATCCTTCCAGAGAATGTTGCGAACAATTGGTTTGATGAACAAGTTGATAGGTCCTTCTTGCAGCCAACAGTCTGGCAAGGCCGTTACGTCATGCATGATTTAATAAGAGAGTTCTCATTTGCTGTTTCTTCCAATGAATATTATGTCTTTCACAGGAATTCCAAGGTTCTCCCACAATTTGCTAATCATATTTCTGTTGATAACGATAATTTCGATCTTCAATGGGGTCATTATGACCATAAAAGATTACAAACTCTGATGTTTTTTGGTCATCACAGAGTTGACAAAAATTATGACACTCTTGGTAGTATAGTGAGAAAGTCAACTAGTCTACGTGTACTGGATTTGTCTTACATTTGCATGAGTAATGTGAGTCAGGCTTCATATATTCTCAGCAAGCTGTCACTTCTTCGATATCTTGATCTCTCTTTTACTGGTATCAAACATCTCCCGGAGGCATTTGGTAATCTATACCATCTCCAGGTACCTGATCTGCGGGGTTGTATAATTGAGAAGCTGCCAAAGAACATGAACAATTTGATCAATCTAAGGCACTTATATGCTGATTCACAAACAATCGCACTGATTTATGCTGTAGGTCAGCTGACAAAACTTCAGGAGTTACAGGAATTCAGAGTTAGGTTGGAGGATGGTTACAAGATAAATGAGTTAAGGGACATGAAAGACCTGAGGAAATTGTGCATTACAAATCTTGAGAAAGTCTCAAGTTTGCAAGAGGCTACAGATGCAAAGCTGGTGGAGAAAAAGTCCCTTGACTATCTGCAATTGAAATGGGTGTACCAGGTACCTGAAAGTAGGTCTACCTCTCAGTTAAACAAGGATATTCTCGATGGCCTACACCCTCACTTCCAGTTGAAAAGGTTGAAAATTCTGAACTATATGGGAATTGATTTTCCTTACTGGGTGCAGCGTCTCACAGACCTCATCGTTGTTAACATAACTAGGAAGGTAGCCCGCGCATATGCGCGGGCACTTATTTAATGTTGCTTGAATTTTTTTACGAATGTTTACGTGTAGATGATATTTTTAAAATAGATATTGACTATATTTTAAATATGTTTTCGTTAATATCTGGTTTGGATATATTACTTGGAACCGTACAACCTTAAATTTAATTAAAAAAAATGTGTCACGATAATGGAACAATAATAGAATACTGGAGTTGTTTCATATCTACTTGTACTATGCATGATTTTTTTAACCAAGATAAAGGGTTTTTTTTAAAAAAACTACCACAATAATCTCTAAAGCATCGTATTGTTGGTTATATTTTGAGAAATATCTATAATTTTTTGTTTGATTTTTTGCAACACCTATTATTTATAATCACATGAGACACCTTTACTAATTAATTTAGAGAATAAATCTATTTTCCCAAACTTATTTACAATAACTAATTTATTGAAGTATACTTTATAGTTACGTCAATAGTGTGTATAATATACATCCATCAAATTGATACTTGATGTGTTGGAATTCCTCAACTATAAAAAAATTATATCATGAGTAGTTTATTGCGCATGTTACTTGATTGTTCATTTGTTGCCAAAACTATTTACAAAAGAGAAAAACATAGATATATGACCATAAATCTCATGGTGGATTAAATGGTTGTATTATAGCAAGATCATTGGTATGAAATATTTTTTCATAATTTCTTTACATCTATGCAACATTTATGTTGCCCACTTATTAGATACTAATGAAATAGTTCTAAAGATTCCAAAAAAAAATTGAGAATCTTAGTCTCAAACAAATTAAAATTAAATGAAATATACTTAAAAATACACAACTAAATTGTGTTGTTTTCATTTATTTTACATATATAGATTTAAATTACCATTGTATAGTCGTCAAGTGATATTTGACACATGAAATATGATGTGAAATTATTTAAAATAGGAAAAAGCACTAATTACCCCCTAAACCTGAAAACCAGACATCTTTCACCCTCAACTATTAATATCGGACGAATTACCCTAACTCAACCCGGAGTGGTTTTGTTCCTACGTGACAGTCCAGTTAGCACTTTTAAAAAAAAAATAGGTGGGGCTTACATGTCACACTCTCTACCCTCTCTATCTCTCTCTCTCTCCCCTCTCTCTCTCTCTTCCTCAATCCCATTACCTAGCCTCTCTCTCTTCTCCTTCTCCTTGCTACAGGGGCCAACCGGGCAGGCGAGCCGCCGCCCCGCCGCACTTTTCCTTCCTCCTTCATCTATTCCCCTACACTTGCTCTCTTAATTGATCCACCTTGTGGTTCTTTGATTGATTGGTGCTTTCTGTCTCGTCAGGAGAGAGGCATTGGTGGTGGGGATCAATTAAGAACCATGGTGGGATGGCATGCTGTGGTAGACAGAGCTACGGGGGCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024211