BGIOSGA024229

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Revision as of 06:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024229| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024229, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA024229

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024229, complete gene.

LocusTag

OSJNBB0041J06.140

Ensembl Transcript ID

BGIOSGA024229-TA

Ensembl Protein ID

BGIOSGA024229-PA

Length

4870

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:17857590..17862459

Sequence Coding Region

17860828..17862459,17860593..17860721,17860418..17860510,17860143..17860337,17859172..17859441
,17858955..17859078,17858273..17858406,17857590..17857688

Genome Context

<gbrowseImage1> name=IndicaChromosome07:17857590..17862459 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:17857590..17862459 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGTGTTGTCGTGGGGAGCAAGAGCAACCGGGACTGGTCGGACTGCGACGCCGCCTTCCGCGAGGAGGCGGGCAGGGCGATCGTCGCGCTGACGGAGGAGGGCGAGCAAGGGCACGCGCACGGGCTCTCGCTCGCGACGGCGCTCGTCGGCAGGTACCCGTGGTCGCCACTCGCCCGCGCCATCCTCGCGCGCTGCTACCTTCAGCGCAACAGTCGGCAGCAGGAGAGGGTTCAGCTCGAGCTGGCGGCGGTGCTCGCCCCGCGCTGCCCCCACATCGCCTCGCTGCTCATCGACGCGCTCATCTCCATGGATTTGTTTGACGAGGCAGCGGAGGTGCGTGACCGCGCCCTCCGCGTGGCGGAGCCCACCGACCCGGCGTTGCACTACACCTTCGTGAGCAACCGCTACTCCTCCGCCGATCATCACGACAACCCCTTCGATCTCGAGTACAGGAAAGCCCACGGCCGAGAGACGATCCGCGGGCAGCGTGCGAGGATCGAGAAGGGCAAGGGGCAAGCCGCGGCTTCACCGGAGCCCGCGTCCACGCCGGAGTGGCCGCCGGAAACCGTCGACCTCGGAATCGCCGGCGATCGCTGGAGCCGCATGAGCGAGGAGGAGCGGCAAGCGCTCCTCAAGGTGAGTTTTGGAGAGATGAAGTCGTACTGCCGCTCACGAGGGTTGATGGATATGACAAGTATGCTTTCCGATGCTGAGGTGTTCGTCAAGAAGGGTTGGTCTTGCCCTTTCTGCTCCGGAATGATCTACGTGGAATTCGCGGCTTTCAAGAGTCACATCGATGAGGAACATATTGTGGGCAAAGAATTTCTGTCATTAGTACCCGAAAGAATATCTGACAGTGAGAGGGAGCTTCTCAGATCATGGAGATGGGAGCCAACCGATGGAGATGATTTGGCAGGGAGGACAAAGATCTTGCGCGAGGTTAAGGGAATCGTCTTTGAGCTCATTGATTTGGAAGTCGTTTCTCTCAACCTTCTGTACATCATGCACAAGTTCATAATGAACCGGGTCAGGCCAGTAGCACCTTTGGTAGTATCCATGTGTGGGTCTTGTGGGATTGGACAGTTGAGTTCCACACACCTTCAGGAACTGTGTGAATTGCTCAAGCCGCTTAAGCTCGTTGTGCAGACCCAGAGAGGTTGGGAACATCAGAAGCATCACAATGATGAACAAGAGAGCCAGCAAGATTCGCTCGTTGTGCATACCCATAGAGGCTGCAACCATCATAAGCGTCGCAATGGCGAACAAGAGAGCCAGCAAGATTCGCTTGTTGGGATTACCTGGTCCCAAGAGACAGGCACACTATCTTTTGATTGTGAGAAGATTGCATCAAGAGAAACTGATGGTTCTAGCCAGGCAGATCGACTTTTTGCCTGTCTATTATCTGAACCTTTGCTTGAGGATCCCATGGAATTGTGTTTCAGCATGTGGAGAGAATGTTTTGTTGATGGACCTGACATTCTTAACAACATAAGTCGAGCATTGGGTAAAGTGAAGCTGAAATTCAGCTCATGGGAAGAGCTAAAAGGAATACAAGGAGGTGTTTATTTCCTTCCTAAGGCCATTTTTGAGAGAGATATTGACATCAAGACTTATTTTGATTCTTGGATTGGCTCTGCACGAGTTGAGATGCTATTAATTGATGCTGAGGTGGATTACTGGAAGGAAAGTCTTCTGAAAACTTGTCAAGTTGATTGCCTTGCGGTTATTTCACCTATTGCAAAGGCTTGCCTTTGGGCAAAATTGGTTAATGATCCCCTAGAGGATGCTTTACTTGCTCATCCACAAAATTGTCATAAACCACAGGTTCCTTTGGATGCCATTCTCCGGTCTTTGTGGCACATAAGGAGATTCTGCGGTGATCTCTGGGAGATACCATGTATATCCCCTGATGTTAAAGCCAGAGTATATCGCGCTATCTTGTTGCATATCTTCTGTTCTTGGGACCAGTGCAAAACATGTGACCTACCTAGTTCAGCGATATTCATGGTTGATTCTTTGAGAAGTTTTGTGATTGATGAAAAGGCTGGAAACATTTCTGCGTATAGAGTTGTTGAATCAATCCTTGAGAGGCTGCACGTGGCACAAACTCCTTTGCATTTTGAGTTCAAGGGTGAATCTTTGGTGCCACAAACAGCAATAGTGCCCAGCCTTCTGGGTTGTATATGCCTAGCACACAATCTTTTTGGGTTGCACATTATTGAGAAGAAATGCAACTGTGTGAATGAGGTCCCCATGAAAACCAAGTCTACATTCTTCCACAGTATTAATTTGGGTTCTGTTGAAGGAACTACGTTGGAGTCTTTCAGTGAACTCTTGAAAGCTGTAGACAAGCAGTCAGTTTGTGACTTCAGGAATGGTGGCTGTGGGCATAGGATTACCCGATACCTATGGTATCCACCACATTTTTTCATGATAGTTTTGAGATGGCCAGACAACAAGGGAAACCATATTAACATGCATAAAGTATTGATCAGCCTAGCAGCGGAGTTGGACATTAGTCATATCTACGAAGGTCTGCAATCAGAAAGCATGTACACTCTGGTTTCTGCACAAGCTGAATCCTGGAAAGGATTAATCGACCGGTACAGTCAGGCCAATCTCCGTCCTGAGATCCTTTTCTTTGAGCATGGCAGGAAGCGTGTATCATAG</cdnaseq>

Protein Sequence

<aaseq>MAGVVVGSKSNRDWSDCDAAFREEAGRAIVALTEEGEQGHAHGLSLATALVGRYPWSPLARAILARCYLQRNSRQQERVQLELAAVLAPRCPHIASLLIDALISMDLFDEAAEVRDRALRVAEPTDPALHYTFVSNRYSSADHHDNPFDLEYRKAHGRETIRGQRARIEKGKGQAAASPEPASTPEWPPETVDLGIAGDRWSRMSEEERQALLKVSFGEMKSYCRSRGLMDMTSMLSDAEVFVKKGWSCPFCSGMIYVEFAAFKSHIDEEHIVGKEFLSLVPERISDSERELLRSWRWEPTDGDDLAGRTKILREVKGIVFELIDLEVVSLNLLYIMHKFIMNRVRPVAPLVVSMCGSCGIGQLSSTHLQELCELLKPLKLVVQTQRGWEHQKHHNDEQESQQDSLVVHTHRGCNHHKRRNGEQESQQDSLVGITWSQETGTLSFDCEKIASRETDGSSQADRLFACLLSEPLLEDPMELCFSMWRECFVDGPDILNNISRALGKVKLKFSSWEELKGIQGGVYFLPKAIFERDIDIKTYFDSWIGSARVEMLLIDAEVDYWKESLLKTCQVDCLAVISPIAKACLWAKLVNDPLEDALLAHPQNCHKPQVPLDAILRSLWHIRRFCGDLWEIPCISPDVKARVYRAILLHIFCSWDQCKTCDLPSSAIFMVDSLRSFVIDEKAGNISAYRVVESILERLHVAQTPLHFEFKGESLVPQTAIVPSLLGCICLAHNLFGLHIIEKKCNCVNEVPMKTKSTFFHSINLGSVEGTTLESFSELLKAVDKQSVCDFRNGGCGHRITRYLWYPPHFFMIVLRWPDNKGNHINMHKVLISLAAELDISHIYEGLQSESMYTLVSAQAESWKGLIDRYSQANLRPEILFFEHGRKRVS</aaseq>

Gene Sequence

<dnaseqindica>1..1632#1739..1867#1950..2042#2123..2317#3019..3288#3382..3505#4054..4187#4772..4870#ATGGCGGGTGTTGTCGTGGGGAGCAAGAGCAACCGGGACTGGTCGGACTGCGACGCCGCCTTCCGCGAGGAGGCGGGCAGGGCGATCGTCGCGCTGACGGAGGAGGGCGAGCAAGGGCACGCGCACGGGCTCTCGCTCGCGACGGCGCTCGTCGGCAGGTACCCGTGGTCGCCACTCGCCCGCGCCATCCTCGCGCGCTGCTACCTTCAGCGCAACAGTCGGCAGCAGGAGAGGGTTCAGCTCGAGCTGGCGGCGGTGCTCGCCCCGCGCTGCCCCCACATCGCCTCGCTGCTCATCGACGCGCTCATCTCCATGGATTTGTTTGACGAGGCAGCGGAGGTGCGTGACCGCGCCCTCCGCGTGGCGGAGCCCACCGACCCGGCGTTGCACTACACCTTCGTGAGCAACCGCTACTCCTCCGCCGATCATCACGACAACCCCTTCGATCTCGAGTACAGGAAAGCCCACGGCCGAGAGACGATCCGCGGGCAGCGTGCGAGGATCGAGAAGGGCAAGGGGCAAGCCGCGGCTTCACCGGAGCCCGCGTCCACGCCGGAGTGGCCGCCGGAAACCGTCGACCTCGGAATCGCCGGCGATCGCTGGAGCCGCATGAGCGAGGAGGAGCGGCAAGCGCTCCTCAAGGTGAGTTTTGGAGAGATGAAGTCGTACTGCCGCTCACGAGGGTTGATGGATATGACAAGTATGCTTTCCGATGCTGAGGTGTTCGTCAAGAAGGGTTGGTCTTGCCCTTTCTGCTCCGGAATGATCTACGTGGAATTCGCGGCTTTCAAGAGTCACATCGATGAGGAACATATTGTGGGCAAAGAATTTCTGTCATTAGTACCCGAAAGAATATCTGACAGTGAGAGGGAGCTTCTCAGATCATGGAGATGGGAGCCAACCGATGGAGATGATTTGGCAGGGAGGACAAAGATCTTGCGCGAGGTTAAGGGAATCGTCTTTGAGCTCATTGATTTGGAAGTCGTTTCTCTCAACCTTCTGTACATCATGCACAAGTTCATAATGAACCGGGTCAGGCCAGTAGCACCTTTGGTAGTATCCATGTGTGGGTCTTGTGGGATTGGACAGTTGAGTTCCACACACCTTCAGGAACTGTGTGAATTGCTCAAGCCGCTTAAGCTCGTTGTGCAGACCCAGAGAGGTTGGGAACATCAGAAGCATCACAATGATGAACAAGAGAGCCAGCAAGATTCGCTCGTTGTGCATACCCATAGAGGCTGCAACCATCATAAGCGTCGCAATGGCGAACAAGAGAGCCAGCAAGATTCGCTTGTTGGGATTACCTGGTCCCAAGAGACAGGCACACTATCTTTTGATTGTGAGAAGATTGCATCAAGAGAAACTGATGGTTCTAGCCAGGCAGATCGACTTTTTGCCTGTCTATTATCTGAACCTTTGCTTGAGGATCCCATGGAATTGTGTTTCAGCATGTGGAGAGAATGTTTTGTTGATGGACCTGACATTCTTAACAACATAAGTCGAGCATTGGGTAAAGTGAAGCTGAAATTCAGCTCATGGGAAGAGCTAAAAGGAATACAAGGAGGTGTTTATTTCCTTCCTAAGGCCATTTTTGAGAGAGATATTGACATCAAGACTTATTTTGATTCTTGGGTATGTTTTCCTTTTTTTTAAAAACAAATTATGTTTGCTCTCTAATTTTATACCATCATTTTAATCTCGTTGATCAATGCTTAAATCCTAGTTGCTGTATTTGCAGATTGGCTCTGCACGAGTTGAGATGCTATTAATTGATGCTGAGGTGGATTACTGGAAGGAAAGTCTTCTGAAAACTTGTCAAGTTGATTGCCTTGCGGTTATTTCACCTATTGCAAAGGCTTGCCTTTGGGTCAGTATGGTTCTTTCAGCACGAACTGAACTTGTAAAGCATGTCTGTAACTTTATTTGTGTATGATATTCATTGTTGACAGGCAAAATTGGTTAATGATCCCCTAGAGGATGCTTTACTTGCTCATCCACAAAATTGTCATAAACCACAGGTTCCTTTGGATGCCATTCTCCGGGTAACGTGTGTTTGGATCCTTCAGTTTTTAATATTTAGCTATTAGTTTTCCTATCTCTGATTCTCTCTGCATAACTGCAGTCTTTGTGGCACATAAGGAGATTCTGCGGTGATCTCTGGGAGATACCATGTATATCCCCTGATGTTAAAGCCAGAGTATATCGCGCTATCTTGTTGCATATCTTCTGTTCTTGGGACCAGTGCAAAACATGTGACCTACCTAGTTCAGCGATATTCATGGTTGATTCTTTGAGAAGTTTTGTGATTGATGAAAAGGTTTGCGTTCGCTTTCTGTTTCCCACTTATCTAAATGCAGCCTGTGACCTCAGGGAAAATACCAGAGAGCAACTTTCTTATCAAATGCTAACCGTCTCCATGTAGTTTACTCATATTTATAATGGATAAGTTATAAATATTTCATATAAAATGAACTGGATAGCTGCCTGATATCTTTCGAGTTTTGACTCCATATTTCTGTTTGGGCACTATTGGAAAAGATAGGCAAAATGGCATTCTTCTTAAACTACTTATTGGTACGTACTACTCCCAAGCTTGTTTTACATTCTCATTGGCTCATTGCTCTAATACACAAAGTGATTGTTTAGTATTTTAGGCTTTTAATTTGAGAGATAATACAATTTATTAAAAGAAACAGAAATGTTTACAGAAATAAACATTTCTGTGATCCATATGAATCTGTGCTAATCTTTTGGCCATTTTGTGCAAAAATTTGCCGTTCTTTAAAGTAAATTAAATTAAAACCCTGTTTGTCGTGATAGAATGTTGCAGGTTCAATTCTGCAAATGCTTATTTTACTAATTTGATACAAGAGTCACCTTTATATTGTCTGGGTCTTGACTGCAAACCAAGTTCTGTCCCACTTGCACTTCCGAGTGTACATATTGACTGTAACATAAGGAAAGTTTGAGCATGTTGCTCTCGTAGCCAATAAGATCACTGGTTCTTTTTTTTTTTAGGCTGGAAACATTTCTGCGTATAGAGTTGTTGAATCAATCCTTGAGAGGCTGCACGTGGCACAAACTCCTTTGCATTTTGAGTTCAAGGGTGAATCTTTGGTGCCACAAACAGCAATAGTGCCCAGCCTTCTGGGTTGTATATGCCTAGCACACAATCTTTTTGGGTTGCACATTATTGAGAAGAAATGCAACTGTGTGAATGAGGTCCCCATGAAAACCAAGTCTACATTCTTCCACAGTATTAATTTGGGTTCTGTTGAAGGAACTACGGTACATACTGCACAGTGTATCCTTTTGATATTTCCTTTTTTATATGTCCATCTTTTCTTTAATTAGCAAACTAACATCCTTTTACTTATTCAGTTGGAGTCTTTCAGTGAACTCTTGAAAGCTGTAGACAAGCAGTCAGTTTGTGACTTCAGGAATGGTGGCTGTGGGCATAGGATTACCCGATACCTATGGTATCCACCACATTTTTTCATGATAGGTACCGCCTTCTCGACTAACATTTCAATGTAATTGTGTGCATATGTTTCTTCTATGTAGGAGAAAGGAAAGATAAGCGAAAGAAATCATTGGATCAGTGTATCATCTGATCTTTAATTTTATCCTGAAAACCATATCAATCGTTGAATATAAATTACACCATATCTGCTATTGTAATGGCTGCAACATAAAATAATTAATCGCCACGACCTTTCCTGCGACAATTTGATGCCAGCCTTCTGTGCACATACATCATTTATTCATTTCTGGCAATTAGGGAACACCTAGGAGACAACAAGCATTCTTCTTATTAATATGAAGAAAAGAAATATAAGGGGACTTTTAAGCTGAGTAATGGGGACAGATGTCTGCATCTTTCATCAATCGACCTAAACTTAGAGCCTAAATCGAGAATATCTAGGAGGACCTAGGCATCTGGTGTCATTGAGAAGAAGACGCTAGATCTGAGATAGAGGACTCGAACCTTGGTCGGGACTGGGGATGCACGCAAGCTGATTTAGTTTCTCTTCTATTGCTGTTTTGTCACAGTTTTGAGATGGCCAGACAACAAGGGAAACCATATTAACATGCATAAAGTATTGATCAGCCTAGCAGCGGAGTTGGACATTAGTCATATCTACGAAGGTCTGCAATCAGAAAGCATGTACACTCTGGTTTCTGCAGTACGTGCTGAGAGAAGTCTTTCCTTTTTATGCATATCTGTGAAAAAAAAAGTGAATTCATTTGTTCCTGAGGTTGATTCGTTCTTTACCTTTTCTTCTCAGTTTCAGTGTGTTTTTGTATATGAATAGTATCTAATGTACTAGTCTGGGGTTTATTTATGTATGATTTGTCATTTATGTTATACCTGTCAAATCAGTTCAAATATTGCTTTGCTATCATGTTGGTAGATCATTGTAGGAGTATATTTTATTATCTTCTTTGGTCGGATCAGTTGCTTGGCAATAGGCAATTGTAGTGTCAGATTATCGTAAGTAATGCTTGCCTGACTAGTATGGAGTTCTGTTTCTGGTATTCGCGCGATAGCATCTGGGTAATTTTCAAACTGTTTGTAATGTAAGGTATGCTATGATGATGAGGGGCGGCAATACCTCTGCTTTGGTCGTGACGAGGCAAGGTGGCTCATACATGACAGCACGACAGTCCAGGCAATTCCTTGTCAGCTTTCCCACTAGAGTTTTCACTCGAATTTGGTTTCAGAATTATTCGATATCATCATCATTCGTAAATGTTCGTCTCCTTGCAGCAAGCTGAATCCTGGAAAGGATTAATCGACCGGTACAGTCAGGCCAATCTCCGTCCTGAGATCCTTTTCTTTGAGCATGGCAGGAAGCGTGTATCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024229