BGIOSGA024257

From RiceWiki
Revision as of 06:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024257| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024257, complete gene.| tag = P0430F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA024257

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024257, complete gene.

LocusTag

P0430F03.2

Ensembl Transcript ID

BGIOSGA024257-TA

Ensembl Protein ID

BGIOSGA024257-PA

Length

5576

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:17151861..17157436

Sequence Coding Region

17157164..17157436,17152883..17153427,17152697..17152783,17152558..17152614,17152093..17152450
,17151861..17151989

Genome Context

<gbrowseImage1> name=IndicaChromosome07:17151861..17157436 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:17151861..17157436 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCACGGATCCGCTGCTCGGCGGCAAGGAGGAGGAGGAGGGTGGAGGTGAGGTGAGGAGGGCGCGGCGGTGGTGGGTGGGGCGGGTGGTGGACACGGAGGAGGCGTGGGCGCAGACGCGGTTCGCGGTGCCGATGGTGCTCACCAACATGTCCTACTACGCCATCCCGCTGGTGTCCGTCATGTTCTCCGGCCACCTCGGCGACGTCCACCTCGCCGGCGCCACGCTCGGCAACTCGTGGGCCACCGTCACCGGCTACGCCTTCGTCACGGGCATGAGCGGGGCCCTGGAGACGCTGTGCGGGCAGGCGTACGGCGCGCGGATGTACCGCATGCTGGGCCTCTACCTGCAGTCGTCGCTGCTCATGTCGGCGGCGGTGTCCGTCCTCGTCTCCGCACTCTGGTGCTTCACCGAGCCCCTCCTCCTCCTCCTCCGGCAGGACCCGGCGGTGTCCGCCGCCGCGTCGGCGTTCGTGCGCGCGCAGGTCCCGGGGCTCTTCGCCTTCTCCTTCCTCCAGTGCCTCCTCCGGTACCTGCAGACGCAGTCCGTCGTCGCGCCGCTCGTCGCCTGCTCCCTGGCGCCGTTCCTGCTCCACGTCGCGCTGGCGCACCTCCTCGTCAACGCGCTCGGCCTCGGCCTCGCCGGCGCCGGCGCCGCCGTGTCCATCACCTTCTGGGCCTCCTGCCTCATGCTCCTCGCCTACGTGCTCCGGTCCGAGAGGTTCGCCGAGACGTGGAACGGCTTCTCCGCCGAGGCGTTCAGGTTCGTCGTCCCCACCATCAAGCTCGCCACGCCCTCCGCCGTCATGGTCTGCTTGGAGTACTGGGCGTTTGAGCTGCTGGTACTGATCGCCGGATTGCTCCCGAATCCGACAGTGAGCACCTCGCTGATCGCCATGTGCTCGAGCACGGAGGCCATCGCCTACATGATCACGTACGGGTTCAGCGCCGCAGTGAGCACGCGGGTGTCGAACGAGATCGGGGCCGGGAACGTGGAGGGGGCGAAGAACGCGGTGGCGGTGACGCTGAAGCTGTCGGTGTTCCTGGCGGCGGCGTTCGTGCTGCTCCTCGGCTTCGGCCACGGCCTCTGGGCGGGGCTCTTCAGCGGCAGCGCCATCATCGCGGCGGAGTTCGCCGCCGTGGCGCCGCTGATGATGGCCTCCATCCTGCTCGACTCCGCGCAGGGGGTCCTCTCCGGCGTCGCCAGGGGCTGCGGCTGGCAGCACCTCGCCGCCGTGACCAACCTCGTCGCCTTCTACTTCATCGGCATGCCGCTCGCCATCTTCTTCGCCTTCAAGCTCAAGTGGTACACCAAGGGATTATGGATGGGTTTGATCTGCGGGCTGACATGCCAGACCTGCACGCTGATGGTGATCACCGCACGAACCAAATGGTCCAAGATCGTGGACGCGATGCAGGAGAAGAAGGCCAGCTACGTCGCGTAG</cdnaseq>

Protein Sequence

<aaseq>MASTDPLLGGKEEEEGGGEVRRARRWWVGRVVDTEEAWAQTRFAVPMVLTNMSYYAIPLVSVMFSGHLGDVHLAGATLGNSWATVTGYAFVTGMSGALETLCGQAYGARMYRMLGLYLQSSLLMSAAVSVLVSALWCFTEPLLLLLRQDPAVSAAASAFVRAQVPGLFAFSFLQCLLRYLQTQSVVAPLVACSLAPFLLHVALAHLLVNALGLGLAGAGAAVSITFWASCLMLLAYVLRSERFAETWNGFSAEAFRFVVPTIKLATPSAVMVCLEYWAFELLVLIAGLLPNPTVSTSLIAMCSSTEAIAYMITYGFSAAVSTRVSNEIGAGNVEGAKNAVAVTLKLSVFLAAAFVLLLGFGHGLWAGLFSGSAIIAAEFAAVAPLMMASILLDSAQGVLSGVARGCGWQHLAAVTNLVAFYFIGMPLAIFFAFKLKWYTKGLWMGLICGLTCQTCTLMVITARTKWSKIVDAMQEKKASYVA</aaseq>

Gene Sequence

<dnaseqindica>1..273#4010..4554#4654..4740#4823..4879#4987..5344#5448..5576#ATGGCGTCCACGGATCCGCTGCTCGGCGGCAAGGAGGAGGAGGAGGGTGGAGGTGAGGTGAGGAGGGCGCGGCGGTGGTGGGTGGGGCGGGTGGTGGACACGGAGGAGGCGTGGGCGCAGACGCGGTTCGCGGTGCCGATGGTGCTCACCAACATGTCCTACTACGCCATCCCGCTGGTGTCCGTCATGTTCTCCGGCCACCTCGGCGACGTCCACCTCGCCGGCGCCACGCTCGGCAACTCGTGGGCCACCGTCACCGGCTACGCCTTCGTCGTACGTACCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAACCACACACTACGCTGCCCTGCACTAGTAGTATATGCGCGCGCGTCCACCGGCGGATCCGCCGCCCACGCCGCCGGCGATCCACACGCCCACATGCGCGCGCGACCATGCATCATCGTCCTCACCTCCACACGCGCATCGATAACTCCATTAACTATACGCATAATAAATTATTAATGCTACTTTCATCCGATAAGAATTTTGAAGCAAGCATGGGTATTAAAAATAGGTAGAAATAATGAAAGGAAGGTTGTGATTGCTAAAGAGGAGAAAATAGGTGAAGAGCATGGTTTTGATTGATTCACGGGAGATGGCCGGTGGAAAAATAGCTTTATTTTAAAATAAATTATTGTGCAAAAAAATAACTATATTTTAAAACGGAGGTAGTATATATATATATATATATATATCGGATCACCGTGCACAATTTACATAAAGAACGTCCTGAACATTTCGCCAACGCGTCGCGCTGCCTACGTGTTTCTTTCCCAGCGAATGCCGTGCCGTTCCATTGCCGTTTTTATCTGTGGCGATGACCATCATATGCACTACTAGTATATTGCAGTTGTACCATTGGTATATGAATTATAATAAAGTAAGATCTACGTATAAGTGACTTAACTACCCACTTACAAGCAAGTGGACTTAACTATAGCTGTGTTTAGTTCAGCGCAAAGTTTTAATTTTGGTTGAAATTGAAGATGATGTGACTAAAAAATTATGTGTGTATGACAGGTTAATGTGATGGAAAAAGATTGAAGTTTGGATCCAAACTTTAGATCTAAACACAGCCTACAAAACTATACAAAGTCAAAGATCAATTTCCACAGTACTAGTAGATTGCAACCACGTACCTAGCTAGCTACTAGCAGTACTAGTGGTAACAACGATATGCGAATGGCAAACAGGGGTCACATGGATGTAGTCAAAGCTCGTGCAAGATACATCGTTTGACCTTAATTTGAAAGGGATTGCACACTTGCACTACTGTGTTATTGTTTTATGTTGGTTGTTTGGATCTCGTAGAAGGAATAATAGTCCAATGGCAATTAATCCGGACGACAACTAGCTTGCCATCATTTTATATCATTTGTTCCATTCTTTTGCTATGTCAAAAGGAAATTTTGGATCTTTGTTAGCCCTACACCAATCAAACAGAACTATATAGTACATCGGATGTGAAATGCCATCATTAACCAAGAGCTATATATAGAAACATTTAAGTGGGCTACCCTAGTAATAAAATGCACGCTTTGAGCGAAGTTAGGTGAAGTGTTATTACAAAATAAACTAGAGATGTGAAGCGTAGTTTAGACTGCTCCATAACCCGTGAAGCTAAATTTAATGGTTGAAACTGTATAAACATGCTCTGAAGTTGAGGAGGAGAAATAGTATACGGCTACGCGAAACGGCTCTCTCTCTCCGCCCCACATATCAATCGATCGGTTTGCCTGATGGTGCCAAAACCGTTGCTTTCTACGACTCCCAGCTTGTCCAAGCTCGCGATTAGCTAGATCAGCCATGCAATCGATAGCTAGCGCTCTATCGTGTCTTCTGGAGGATTAACTGATAAATCACCCGGTAGGCGCCGCCCGTGGATTGGAACCGCCCGTTTCTCAGAAAAAATTCACCGCACGTCGTTAACTGATCGCTGCGACTTGCACGCCACAACGCTTGATTGGTTGTCTCGTTGTGTAGAAGAAACTGCACGGAGAATGCGATCATTTCAACGTGCGTCATGGCGCGAAATTAAAAAAAAAAACGACAGATGTTGCCACGGGTTCCATGTATATATACTGACGAACCGGTCGTCGGTCGATCTCCACTAGCCAGCTAGCTAGCTACACACAGAAATCCACAGAAAAAACCGTTCTCCATAGTAGTAGTGCTGTTTTTTGTTTAAAGAAAGCAAAAATTTGGGTGGTTGAAAATTGAAATGGCCTTGAATTCTCGCTCCGGTTTGGTGGTGTCACGCGCTGGAACTGGTAGTATTACTGGAACCGGTCAGGGCACTCCGTCTCACGTCATCGACCAGAAATCGATCGATCGATCGAGTCGCCTGTGGAATGGTCAAAGTTACTCCTACAAGTCAGGCGAATCACCGTCTTCACAGATTTCCGGAGTCTAGAACAACCCGTTTCCGGAGTCAGAGCTCGCTAGTGATAATTTTTTGCTCAACTCCGTACAGGTTTTTTTCCTGTTGTTCTCTGAATTCTATAGCTAGTCCCTGCTATACTATTCACCGAGCGATGATTTCGTCAGCCACCGGAGACAGTACCAATTCAGTACTGCTATTTAATTACTCGCTCACATGCCTATAGTACAGATAACAAAAGCTGCGTACGTGATGAATGGTTAGCACGATGCCATCAATGGCAGTCGGTAGGATGATGAATGGTCCGATGGACGATCGAGTGAAGACGATGAGCAGTGGTGGACACGTCCGATGGATGGATGGATGGATGGATGGATGTGAAGAGACGGGCCAGGCCCCAATCCAGCGTGAGACAGAAAGGCCATGTTTCAGCAACCTTTGCTGTCTCCTTGATGATCTCTATAGCGATTGCCCCTCTGAACGAATTGAAGAGCGATTGCCTTTTTGAACGAATTAAAGAGCTTTGCACGATTGCATGTGCGCAAGCATTGCTATCGTTATTATATTCAGCGAACGACTCATCACGCTTGGTGGACTACGAGCAGCTACGGCTCTGTTTATGAAGCTTATGATAATCTTTAACTTGTTCTAGAATCTCCAGCAGCTATCAGAAGCCGTTCTAAATAATATTCAAATTTTGGGAATTTAGAGTTGTATATATTATTGTAGATCATACAGGAAGTGGTTTTTTCGATTTTTGCAATTTAGCTTCTAACCATCCGCTTCTCGAAATATTAAGATCCCAGATAGGCCTACATCACGTATCCGGGGGCCATTTATGATTGATTTGTTTACCGCAAGGGATGGCGTTTGTTCTTTCATTTGGTATGGGACAAATCATGGTCGCTACACCGAATTAAATAGAACCACTAGTATCATATATCCATGGAGTATTTCAATTTTCATCAACTTCTCCCGCTGCATTAATTGTGCCCCTTTATTTTGTGATTGCTGTCGATCTCACGACAGTTCGCCCAGGTTTGTTGCTTATATATGATTATATCTCTTGCAATCTCACTTTCATATACATAAAATCAATTTATAGGTCGCGGTACAAAGAAGTCCACATCATTTAATCATAGGATTCATTTGAAATGCAGGATCAAAAGAGAAAACAAATGAATGAGAAAAGCATACAATTCTGATTGAAATTCAACTTCAAAAAGAATTGTAAAAAAATAAACCGAAAAAAAAACAAGAATAATTGTTTGATTAGAAAAAAAAAATATGAATCGAATAAAAGAGATAGACTCATAGAAAACTCTTCATATGGTTGGACCTCATGTTAAAAGTCCTTCAAAACTTATATGAATTGATGTATTTCTTAGAAATTTCATAGGATTTAATAGTTTTTAATTTAATACTTCTCAAAGGGCATACCGAAAAAAAATCATATAAAATTTGAATCTTACCAAATTCATACGTTTTTCCGGAGTATCAATGTTGCATTGCATCTGCGAGAATATTTGAAGTTCTTACAAAATGATGGGTAAATTGAAATTTGAAAATGTGGGTGTGTTTGATTCAGACGGGCATGAGCGGGGCCCTGGAGACGCTGTGCGGGCAGGCGTACGGCGCGCGGATGTACCGCATGCTGGGCCTCTACCTGCAGTCGTCGCTGCTCATGTCGGCGGCGGTGTCCGTCCTCGTCTCCGCACTCTGGTGCTTCACCGAGCCCCTCCTCCTCCTCCTCCGGCAGGACCCGGCGGTGTCCGCCGCCGCGTCGGCGTTCGTGCGCGCGCAGGTCCCGGGGCTCTTCGCCTTCTCCTTCCTCCAGTGCCTCCTCCGGTACCTGCAGACGCAGTCCGTCGTCGCGCCGCTCGTCGCCTGCTCCCTGGCGCCGTTCCTGCTCCACGTCGCGCTGGCGCACCTCCTCGTCAACGCGCTCGGCCTCGGCCTCGCCGGCGCCGGCGCCGCCGTGTCCATCACCTTCTGGGCCTCCTGCCTCATGCTCCTCGCCTACGTGCTCCGGTCCGAGAGGTTCGCCGAGACGTGGAACGGCTTCTCCGCCGAGGCGTTCAGGTTCGTCGTCCCCACCATCAAGCTCGCCACGCCCTCCGCCGTCATGGTCTGGTAAGCAAGCACTGACACACAAGCTCAACGCCGGGTTGATCAAACTAAAGCTTAATTAGCTAGATGTAATGAGATTCTTTTTTTTTTCACTACATGAAGCTTGGAGTACTGGGCGTTTGAGCTGCTGGTACTGATCGCCGGATTGCTCCCGAATCCGACAGTGAGCACCTCGCTGATCGCCATGTGGTAAGTTCGTCGTTGCGCTGTCCCTTCCATGAATCGATCGCAAAGGAAGAAACTGATCTGATTAATGCATGATTGTGTTCAGCTCGAGCACGGAGGCCATCGCCTACATGATCACGTACGGGTTCAGCGCCGCAGTGAGGTACGTTACTTACATACGCACGCTACCTGTTCGATCGCCGGCCATTGTTCGTCGCCGTCGTTTCTGACCGAACGTTGCACGCGCCACGCGCGACGCGACACGCGCAGCACGCGGGTGTCGAACGAGATCGGGGCCGGGAACGTGGAGGGGGCGAAGAACGCGGTGGCGGTGACGCTGAAGCTGTCGGTGTTCCTGGCGGCGGCGTTCGTGCTGCTCCTCGGCTTCGGCCACGGCCTCTGGGCGGGGCTCTTCAGCGGCAGCGCCATCATCGCGGCGGAGTTCGCCGCCGTGGCGCCGCTGATGATGGCCTCCATCCTGCTCGACTCCGCGCAGGGGGTCCTCTCCGGCGTCGCCAGGGGCTGCGGCTGGCAGCACCTCGCCGCCGTGACCAACCTCGTCGCCTTCTACTTCATCGGCATGCCGCTCGCCATCTTCTTCGCCTTCAAGCTCAAGTGGTACACCAAGGTAGTACATTACTTATACTTACAATCTCACATTAATCCTTTTCATTTCTGCTTCACAAAGATTACATGCATGTGACATTTGATTTGTGTTGCATTGCTTGTAGGGATTATGGATGGGTTTGATCTGCGGGCTGACATGCCAGACCTGCACGCTGATGGTGATCACCGCACGAACCAAATGGTCCAAGATCGTGGACGCGATGCAGGAGAAGAAGGCCAGCTACGTCGCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024257