BGIOSGA024276

From RiceWiki
Revision as of 06:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024276| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024276, complete gene.| tag = OsI_260...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA024276

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024276, complete gene.

LocusTag

OsI_26076

Ensembl Transcript ID

BGIOSGA024276-TA

Ensembl Protein ID

BGIOSGA024276-PA

Length

3611

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:16702654..16706264

Sequence Coding Region

16705818..16706264,16704973..16705020,16704389..16704487,16703955..16704299,16703503..16703595
,16702654..16702917

Genome Context

<gbrowseImage1> name=IndicaChromosome07:16702654..16706264 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:16702654..16706264 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGTTCCTCTCGACGCCGTCGTTCGACCTCTCCGCCGGCGCCGAGCCCACCCTCGGCCCGCGCTCTCCCCCTCCTCCCCCTGACGCCGCTCACCCGCCGACCCCGCAGCAGGCCGCGCCGGCGTCGGAGGCGGCGGCGCGGAGGCTGCGGGAGGCGGAGGAGCGGCTGCGGGAGGCCATCCAGGAGCTCCACCGCCACCAGCACGGGGGAGGAGGGGATGGGGATGGGGACGGGAAGGGGGTGGCTGGAGATGAGGAGGGCGGCGGTGGTGGTGGTGGTGGGTGGGGTTGCGGGCACGAGGGGGAGTCGTGCGCGGCGCACGCGGCGGGGAACCTGTGCCAGAGCTTCCTGCTCTCCTACGGCGTCCGGGTCGGCATCGGCATCCTCCTCCGCGCCTTCAAGCTCGCCCGCCGCAGATCCTACTCCTCCCTCCTCGACCTCAAGCAACTGGTTTCGGAGAAAGATCTAATAGTGAGGGAGGAAGCTTGCCGGTGTGCATATAATTCTGCAAAGTCTAAGAACAGATTTCACTTTTGGGGAAGCCATTGGAGGCATGGAGATGCATTACTTTTTTCACTTGCGTCTGCCCAGGTTATGTATTCTTTCGTTATGAGGCCTGAAAGCTTACCTAAATCGTACCAAGACTTCATCCAAAAGACTGGACCAGTTGCGGAACCTGTTTACAAGGCTGTAAGAGATTGCTGCAGAGGTGGTCATGTGGATCTCATTGGTCTCTCAGCCTATTTAGCTAACAAGAATTCAAATTTGATAAATTTAACAAAAAGTCCACCCATTATTCCATGTTCTGTGATACATCCTGACAGAGCATCGTGCTTGGCTCATAATGTCAGTGTCTCTTCATCAACGTTCAAGAAAACATTCCCTCTGTATTTCTCATTGACATTTGTCCCATTTGTTGTTCTACGCCTTCAAAAGTTCTTGGAATCACCAGCTGCAACTTGTTGGCGAGCTCTTGTGGGTGCAGTTCGCTCTACGACCTTTTTGTCTGCTTTTGTTACATTCTTCCAGGTGGCTCTTTTCTGCATGTGCATGGGGGGAATCATGTATTTCCTGGAGTATGAGCCAGATACCATGGCTCCATTCCTCAGAGGACTCATCAGACGGTTCCTGGCGAGCAAAATAAGCAACCCGAGCCCACCGCCAAATCCCAATGCCTCCTACTCCTACCTTCAGAAGCTGAACGTGCTGGAGCAACCAAGAACACAGCAGGGCCCAGAGAATGGCCTGACATCATCAGAGAAGTACAACCTGGAAGCAATTCCCGGACTTTGA</cdnaseq>

Protein Sequence

<aaseq>MPFLSTPSFDLSAGAEPTLGPRSPPPPPDAAHPPTPQQAAPASEAAARRLREAEERLREAIQELHRHQHGGGGDGDGDGKGVAGDEEGGGGGGGGWGCGHEGESCAAHAAGNLCQSFLLSYGVRVGIGILLRAFKLARRRSYSSLLDLKQLVSEKDLIVREEACRCAYNSAKSKNRFHFWGSHWRHGDALLFSLASAQVMYSFVMRPESLPKSYQDFIQKTGPVAEPVYKAVRDCCRGGHVDLIGLSAYLANKNSNLINLTKSPPIIPCSVIHPDRASCLAHNVSVSSSTFKKTFPLYFSLTFVPFVVLRLQKFLESPAATCWRALVGAVRSTTFLSAFVTFFQVALFCMCMGGIMYFLEYEPDTMAPFLRGLIRRFLASKISNPSPPPNPNASYSYLQKLNVLEQPRTQQGPENGLTSSEKYNLEAIPGL</aaseq>

Gene Sequence

<dnaseqindica>1..447#1245..1292#1778..1876#1966..2310#2670..2762#3348..3611#ATGCCGTTCCTCTCGACGCCGTCGTTCGACCTCTCCGCCGGCGCCGAGCCCACCCTCGGCCCGCGCTCTCCCCCTCCTCCCCCTGACGCCGCTCACCCGCCGACCCCGCAGCAGGCCGCGCCGGCGTCGGAGGCGGCGGCGCGGAGGCTGCGGGAGGCGGAGGAGCGGCTGCGGGAGGCCATCCAGGAGCTCCACCGCCACCAGCACGGGGGAGGAGGGGATGGGGATGGGGACGGGAAGGGGGTGGCTGGAGATGAGGAGGGCGGCGGTGGTGGTGGTGGTGGGTGGGGTTGCGGGCACGAGGGGGAGTCGTGCGCGGCGCACGCGGCGGGGAACCTGTGCCAGAGCTTCCTGCTCTCCTACGGCGTCCGGGTCGGCATCGGCATCCTCCTCCGCGCCTTCAAGCTCGCCCGCCGCAGATCCTACTCCTCCCTCCTCGACCTCAAGGTCCTCCTTGCTCCTCTCCTCCTACCTGAATTTGCAAATTTCTTTCGGTTAGTGCTCAACTGCGCCCCATATTAGATTAGTTTAGTTTGGACGGAATTATTCGGAGAATTTGGCCGGGAACTGGGATTCGGCTGTGCGAATTTACTTCATCTTGTTTTGGTTGGCTAATTGGAGTGGAATTGGGGGTTTTGGTGCTTAACTGTTGGAGCTTGGACACACGCACATTAGGGCGTGCAAATGTGTTAGCAAAGGACAGGGTCATATATTATGCTGGTCTTGATTGTGATGTTACATCTATTGCTCTATGTTCATTTACTTGAATAGTTAGTGGTGAACTGGTAATGAGCTGGTACTAGTAGTACTTGTGTAGGACCAGCTGGTAGTGTTTGAAGCACATCAAATAACCTGTTGGAGGGATGTTTCTTGCTATGCATTAAATGGTTCGATCCCTGTTGTGAGGCTATCCAGTATGATTTTTTTTTCTTAAAAAAAGTTTTGAACCTTTTGTTAATAATGTTTGAAAAATAACCTCTGCCACACCGAGATAATAGCATATGGTGTAGCATGTGTTTTCACTGTTTTGCCTTGCCATCAGCCGTGACATGGCTGAAAGGTTCATTTAAAACAAAATACTGGATGGTTTATTTTTAAAATATTACTAAGAAAAGGTTAAAAAATAAAATAATTGGTCCAGTTCCCAAACTTCCCTTTCTGACAAATATTTACTGTTCTACTACTAGTATACTACAAAGTTCAAATAAGATGTCATTGATATAACTTTCTTTTCTAATTTGCAGCAACTGGTTTCGGAGAAAGATCTAATAGTGAGGGAGGAAGCTTGCCGGGTAGGATTACTTTTTGGAGGATTCACTGGATCATATCATGCACTTCGATGTTTCCTTCGGAGATTTCGGAAAAAGGAAACACCATTTAATGCGTAAGTAACTCTATGCTTATGCTGTTTTGTGTCTATTTATCTTGTCTGATTCACTACAACACATCTGCAACGCATGTGCACCTCTAACCAGTTCTTGAATCTGAGATGGTCCCTAAAAAGTAGATAGGTCCAAAGCATGTTAATTTTTTATTATAAGATTACCTCGAATAATGTTCATGGACTCAACTGAAGGCGTGATGGAGCAGAATATTAGCAGGTTCGGTGGCAGGCTTGGCGATAGTAGCGCTAGATGATTCAAGTAGGAGGCGCACCCTTTCTCTATATCTTCTGGCAAGGCTTGCCCAGGTCACCAACTGCTAAACTGTTGCATTTTATATGGTGAAGATGCATGTATGGCCCTTTTCCTCATGTATTGATGCTTGGTTTTTACAGTGTGCATATAATTCTGCAAAGTCTAAGAACAGATTTCACTTTTGGGGAAGCCATTGGAGGCATGGAGATGCATTACTTTTTTCACTTGCGTCTGCCCAGGTAACAAGATGAAGTTGACTGATTTGCTTTGGGATTATTATCCTGTTATGGAGATAAGATCTATATAATCATATGAAATATCCTTCCAGGTTATGTATTCTTTCGTTATGAGGCCTGAAAGCTTACCTAAATCGTACCAAGACTTCATCCAAAAGACTGGACCAGTTGCGGAACCTGTTTACAAGGCTGTAAGAGATTGCTGCAGAGGTGGTCATGTGGATCTCATTGGTCTCTCAGCCTATTTAGCTAACAAGAATTCAAATTTGATAAATTTAACAAAAAGTCCACCCATTATTCCATGTTCTGTGATACATCCTGACAGAGCATCGTGCTTGGCTCATAATGTCAGTGTCTCTTCATCAACGTTCAAGAAAACATTCCCTCTGTATTTCTCATTGACATTTGTCCCATTTGTTGTTCTACGCCTTCAAAAGGTAACTTTCTAATCTTGTTTCCCACTTATGCTATTGCTTGATCGAAATATTTTTCTTTCAAATAAAATTTGATGCCTCAAGTATAAGCTAATTGTACAAGCCTTCAAATTATAGCACATCTCTATCTTTGTACTCTTCATGCACAGTGCACAGACACTTTAATTTTGCTTAATGCAAAATGCATGCATTGCTTTTTAGTTATATATGTTGCCAGTGAAACAAAATATTGAGCAACATCCCGAGCACTCAACAAGATTAGCACAATGAATCTTCTTACTTTTTCATTATCCTGTAGTTCATACATATCCATCTTCTATGTTAATTACCTAATGATGGAATCTCTGTATCAAAAATATCAGTTCTTGGAATCACCAGCTGCAACTTGTTGGCGAGCTCTTGTGGGTGCAGTTCGCTCTACGACCTTTTTGTCTGCTTTTGTTACATTCTTCCAGGTACGCTCTTTTTGTCTGCTTTTGTTACATTCTTCCAGGTAATTGTCGAGGACAGTCCTTTAACAAATACTAGTAAATGTTTCATGATCATAATATCCTTCTGGTTTCATTGCTAGGCTGCCATCTGTTTGCATCGTAAAGTTGCAACCAAAGACCACAAACTTGTGTACTGGTTTGCTGGTCTGATGTCTGGTCTTTCTATTCTTTTGGAAAAGAAAGCCAGAAGAGCTGAGCTAGCTCTCTATGTACTTCCCCGCGCAGGGGATTCTTTGTGGTATATATTAATCAACCGCCATCTGCTCCCAAATATTAAAAACGCTGAGGTATTTTTCTTCATTGTTCAGTTTGTTTTTCTACTTTGGACAAAAACTACATGAGGATTACTTGCAATACTCTAGCTTATTTCAAAGTAATCTGGTGTCGAAGAGCAGTGTAAACCAACATTAGTCCTAAGTTCTTAATTCTACACAATTTGCCTATTGCCTTGATAACTGGAAGGGATCATGTTTGAAGTCAGTGTGCCCCTTGGTTAGTAGATGATTATATTTTGCAGATCCGCTGACAGTTACCCGGCAAACATTGCAGGTGGCTCTTTTCTGCATGTGCATGGGGGGAATCATGTATTTCCTGGAGTATGAGCCAGATACCATGGCTCCATTCCTCAGAGGACTCATCAGACGGTTCCTGGCGAGCAAAATAAGCAACCCGAGCCCACCGCCAAATCCCAATGCCTCCTACTCCTACCTTCAGAAGCTGAACGTGCTGGAGCAACCAAGAACACAGCAGGGCCCAGAGAATGGCCTGACATCATCAGAGAAGTACAACCTGGAAGCAATTCCCGGACTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024276