BGIOSGA024286

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Revision as of 06:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024286| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024286, complete gene.| tag = P0477A1...")
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Gene Name

BGIOSGA024286

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024286, complete gene.

LocusTag

P0477A12.38

Ensembl Transcript ID

BGIOSGA024286-TA

Ensembl Protein ID

BGIOSGA024286-PA

Length

4175

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:16486910..16491084

Sequence Coding Region

16491070..16491084,16490869..16490920,16489506..16489624,16488820..16489039,16488667..16488734
,16488505..16488577,16487809..16487921,16486910..16487062

Genome Context

<gbrowseImage1> name=IndicaChromosome07:16486910..16491084 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:16486910..16491084 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCTGCGAAGGTGGAGAACCGCGGCGGCGGTGGGTTCGGTTCGAAGAGGTCACGCAACGACGTGTCTGTAAGGGAGGGGGACTGGACTTGTCCTCAGTGTGGTAATGTCAACTTCAGTTTTAGAAATGTTTGCAACCGCGGAGCCTGTGGTGCACCCCGTCCATCACCGAGTCTAAGCCCAAGAGTGCCACCTCCTCTTGCTGCTGGATATGATCGGCCACATCTGTTTTATGGTAGTGCTGGCACCCCACCTCCTATTCCTCTTGGATCTGGTAGCTATGGTGCCCCCTATCCACATCTTGGCTTGCGGTATGGATATGGTCCACCAGTAGGACCTCCTGCTTCATATGGCCTTTTTTCTTCTTATGGTCAACCTGGACCAATGGGCAGTCCGATGGGAGGCATGGGCTATGGCCCTGGACCTGAGCTAGGCCGATATGGTTATGGTTTTAGAGGATCTCCAATGCCGGTTTCTAGCCCATGGTCTGGTGGAGCATTAGTGGAAAATAATGACAGCTCTGCTTCACGCAAGCGTCGTGGAGGCCCAGATGGAATGGCTGAGAATGACTGGATCTGCCCAAAGTGTGAGAATGTCAACTTTTCCTTCAGAAACAGTTGCAATATGAAGAAATGTGGAGCTCCAAGGCCAAGCCCTGGATCTAATGCTACCCCATGTCGCAAAGACAAGGACGCTCCGGAAGGGAGCTGGACCTGCCCGGAGTGCAACAACCTGAACTACCCTTTCCGCACGGCGTGCAATCGGAAAGGCTGCGGAAGCAGCAGGCCGGCAGCGGCCACGGCGAACTAG</cdnaseq>

Protein Sequence

<aaseq>MASAKVENRGGGGFGSKRSRNDVSVREGDWTCPQCGNVNFSFRNVCNRGACGAPRPSPSLSPRVPPPLAAGYDRPHLFYGSAGTPPPIPLGSGSYGAPYPHLGLRYGYGPPVGPPASYGLFSSYGQPGPMGSPMGGMGYGPGPELGRYGYGFRGSPMPVSSPWSGGALVENNDSSASRKRRGGPDGMAENDWICPKCENVNFSFRNSCNMKKCGAPRPSPGSNATPCRKDKDAPEGSWTCPECNNLNYPFRTACNRKGCGSSRPAAATAN</aaseq>

Gene Sequence

<dnaseqindica>1..15#165..216#1461..1579#2046..2265#2351..2418#2508..2580#3164..3276#4023..4175#ATGGCTTCTGCGAAGGTAACGTCGGGCTTCCAATTTGGTCCGGTCTCTGGTTCGGGTTGTTCTTGGCGGGGGGGAGTTCTGGATGGTTTGTCTGTCTAGGGTTTTCGATCTCTCTGATGCTTGTTTTGATTGATTCCGGGGGATGTTCCGTGCTGTCAACGCAGGTGGAGAACCGCGGCGGCGGTGGGTTCGGTTCGAAGAGGTCACGCAACGACGGTGAGATTCTCGGCGGAATCCCCCTTCTTCTCTTATTACCGGGTTTTGGTTGAGGTTAAGTGCGGAGTTAGGGTTTTTTTTTAATCAAAGGGGCAGAGCCCTCCGTTTCTATTAAAGAAATGATGAAGCTATTATAAGAGTTTGTCTCATTTGATGAGAGCTGAAGTCTGGGAGTTAGGGTTTGGTGAAGTAGAAGTTTTAAGTGTTGGGGTTTGGTGAAGTAGAGTGTTTAGGGTTGTTCTTGAGTAACGGTTTGGTTTAACATGGAGTTGGGGATTGGTCCAACTGCGAGGAGTGCACGCATTAAACAGGGAAATATGGTAGTATATGTATATTTATTATTTGAGAGCAATGAAAACGAGGATGAGTGCAGAGAATTGGCTGTGCTGGATTATATACTTTTGTGACTTCCTCTGATACATATGACCCTTATTGTTTCTCTGTGACAAGGTTTGGTTAGTCATATGACATTTATGTTTTTATTTTCATTGGGAACCACCTTTTCAGAAGCTTCTCTTCATTATAGGTTGATGTGTTACGCGGTCTTATTGATGGTGCTTATACGTATAATCTCATTAAGCCTTTTGTCTTAACAGAAATGTTTAATTGGATTCTTGCATAGTTGAATTTGCCCCTGAGTTTGCAAAAAGAAGTCGTTGCATGGTCACTACTGTCTATATCGAGTTGGTTCTTTCCCTTTGTTTCTGTAATAATATTTACCTAATATTATCGTGTTGCTTTTCCAGGGAACTAACTATCTTTTGTAAGTAGTTGGTGGCTATTTGGTTCCGTCTCACTATTGAATTGTTTGAACATTTGTGTTAGTCTGGGTTATCTGTAGTTTCTCTAATCAACGTTTTAGTTATGTGAGCTTACTATTTATTTGTGCATTGATTTTTTTCCTTTTCTGAAAACATGGTGCAGTTTTTAGTCCCTTTGGTTCCTTCATGTGGTAAAGAATGCATGCATAAATTTAAATTAGTAGTTTCTAGAAGATAAGTCCCGTGCTTTCGTAAAATGTTGGGGTAGGTAGCATGCAGTATTGTATCTCTGCAAAATTTATGTGCGTTATTTCCGTGGTATTCCTATGCTTTCCTTAGCGTTGTTTGGAGGGCACTTTCCAGATAGAAATGTCTTTTGTGTATTATAATATTGTTCTTAGTTCCTCTTTTGGACAGGGAACTCATTATACTGTCTTTTAATACTTGAGTCTGTTGGTTAAGAAAAGGTTCTACTATTTTCAGTGTCTGTAAGGGAGGGGGACTGGACTTGTCCTCAGTGTGGTAATGTCAACTTCAGTTTTAGAAATGTTTGCAACCGCGGAGCCTGTGGTGCACCCCGTCCATCACCGAGTCTAAGCCCAGTAAGTTGTTGTAGATTCCCCAAGTGATGTCATTACTGGTATATGTGGTTATGTGGTCTGATGGAAAATAAACCAAAAGTGGTGATTGGTTATTTCCCTTCTTTTGCATCGTCGACAGACATGTTCCTGTAGGATCTAATCTTTACACATATAGTTCCGTTGCTATTCTAACCTGTATGTATCAGTGAATCTAGCTTTTGGGTCTCCTTTTTCTCAACTAGATGTCGTAGTGGAAATCTACCAATCATTTCCTTTTTCAGTACTGGGAAACTGTTATAGAATAGAATAATACGCATATTTTATAAGCACCTGTTAACACATTCTGGTGCTAGGTAATGATGGGCCTTTCTTGTGATACTCTCTTGTATGTAAATCTGATGTACATGAAAGTGACATGGCAGAAATGAATTTAACTGTCCACAACCCTGGAGAAATATTTCTGTACTAAATCTTGCATGCTTTACAGAGAGTGCCACCTCCTCTTGCTGCTGGATATGATCGGCCACATCTGTTTTATGGTAGTGCTGGCACCCCACCTCCTATTCCTCTTGGATCTGGTAGCTATGGTGCCCCCTATCCACATCTTGGCTTGCGGTATGGATATGGTCCACCAGTAGGACCTCCTGCTTCATATGGCCTTTTTTCTTCTTATGGTCAACCTGGACCAATGGGCAGTCCGATGGGAGGTCTGTATTTCTTTCTCAATTGAATATTGCAGTTATCTCAACAGATATTCAGATTGGCATATGATTCCTTTGGTAACCGTTGCAGGCATGGGCTATGGCCCTGGACCTGAGCTAGGCCGATATGGTTATGGTTTTAGAGGATCTCCAATGCCGGTTTGTCTTTGCTACCGCACTTCTATATTCTATAAATTGGTCTTCTGTTCTCCAAGAATTCATAAATCGTTCTACATATATTTATAAAGGTTTCTAGCCCATGGTCTGGTGGAGCATTAGTGGAAAATAATGACAGCTCTGCTTCACGCAAGCGTCGTGGAGGTAACTGATGATATCTGTTAAATACATTCTTGTTAGTTTGTTGTTTTACCACCTATATGCACTTTGTTATTTCTTCTCTTTTAAAAAAAAGTATATGAAAACTTGGTCTGTTGTTCCTTCAACAAAGTGCCGCACCTGCACATGATAAAGTGTAAGCATTATGGTTTATTAAAAGGCATGTTTAGTTTGTAACTCATATTTAATGCATTTATTTAATCCTGTGGTGTCCAACTTAACACATTCATCGGGACATGTGGTAACACTGCAGCTGTCTTTGGTCAATAGCATACTTTCTGTTAAATTGAAATGTAGAGGTCCTCGCCTTTTGCTTGGGTGACCTCAATGTGATCATTTTATGATGCTGATGTTGTGCCACATGGCTTATAGTCACATTGGTTCATTTTTAAAGGGTACCATTTTAAGATGCGTGGAGATGAAATGAAATGGATCAGCTTGTTATTTTCCTGTTTTCATTTTCATTGAAGTCATTTACCTATAGGCTAATAGAAACTTTTCCATTCCCTTTCAGTACTTCTCTGTTTATCTACTGGTTTCTAGTTTCTTATGGAACTTGTTATTATAGGCCCAGATGGAATGGCTGAGAATGACTGGATCTGCCCAAAGTGTGAGAATGTCAACTTTTCCTTCAGAAACAGTTGCAATATGAAGAAATGTGGAGCTCCAAGGCCAAGCCCTGTAAGCAGACTATTCCCTTTCCATCTTTCCAAAATTTGTCTGTCTGCTCAACTGCTCAAGATAAGAAGGCCCTAGTATTCATGTCACTTGTTGTTCCAAGTGACAATTATAAACTGAAATCTGTTCAGGTGATTATACAATTGCGTTCAATCAATGTAGAAAACTCCCATCATTGTTGGCTGTGTTCTTTTGGAGGGGTTGGGAACCCCTCCCCTCCGCACGAAAAACGGAGCGATAGATTAATATGTGATTAATTAAGTATTAGCTATAAAAAACTTGAAAATGGATTAATATGATTTTTTAAAGTAACTTTCCTATATAATTTTTTTGCAAAGCGTGTACCGTTTAGTAGTTTGAAAAGCGTGCACGCGGAAAACGAGGGAGACGGGTTGGGAATCCATGGGAAAGAATACATATTTTTTATACACAACTCTGCTTAACTCTTGTCTCATGTGATATCGCAAATAATTTATTTTCTGAGATTAACTGTTGGTAATTTTTTTTAATGAAATTGAGCGTACATATAAATTCTAAATTGGAACCACTGTATTCTGTTCCTATATGTTACAATGCTTTTCTGTGTCATGCTTTGCATTTTGCACTGTCATAACGAACCGGGTTAGTATAGCATAAAATGCATCTACTAGTGGCTGAACACTTACAACCATACACTCTATTTTGTTTTTTTGGCTGTTGAACTCTCAAATAGATAGAGAAGCATAAACTTTTTTCCCTACTCTTTTCAGGGATCTAATGCTACCCCATGTCGCAAAGACAAGGACGCTCCGGAAGGGAGCTGGACCTGCCCGGAGTGCAACAACCTGAACTACCCTTTCCGCACGGCGTGCAATCGGAAAGGCTGCGGAAGCAGCAGGCCGGCAGCGGCCACGGCGAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024286