BGIOSGA024300

From RiceWiki
Revision as of 06:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024300| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024300, complete gene.| tag = OJ1753_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA024300

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024300, complete gene.

LocusTag

OJ1753_E03.118

Ensembl Transcript ID

BGIOSGA024300-TA

Ensembl Protein ID

BGIOSGA024300-PA

Length

3329

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:16210262..16213590

Sequence Coding Region

16213247..16213590,16212275..16212800,16211098..16211249,16210262..16210397

Genome Context

<gbrowseImage1> name=IndicaChromosome07:16210262..16213590 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:16210262..16213590 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCAGCGGCCACCGGCGGTGGCGGCGGCGAGGACGACGCGGCGGTGCCGCTGCTGCTGCCCGTGCTGCCGCCGGCGGCGGGGTGGTGCAGCTGGGAGTGGGAGGACGTGGCGATCTCCGCGGGGCTGGTGGCGGTGCAGCTCGCGGGCGCGGCGTACATGGTGGTGCTCGCGCCGGTGCTGGCGCTCGGCCTCGACCCGCTCTTCCTCGTCACCTTCGGCAGCCTCGCCACGGGCCTCTTCACCCTCCCTTTCGCCATCAACCTCGAGAGGAAGAGATGGCCGTCGCACCTCAACGCCAACCACCTTCTTCTCCGCCTCTTCTTGCTCGCCCTCGGAGGGGTGACGGTGTTCCAGGCGCTGATGCTGCACGGCATGAAGAAGACGTCGCCGGCCATCGCCTCCACCATGCCCAACCTCGCCCCGGTCTTCATCTTCGTCGTCGCCGCGTGCCTCGGCTTCGAGAGGGTCGACCTCAGCTGCCGGTACACGAGGGCCAAGATCGCCGGGACGGTGCTGTGCCTCGCCGGCGCCGTCACCATGAGCGTCCTGCAGAGCCCCGCCGCCGCCGCCGCCACGCGTAGCAGCAGCCACAGGACGACGACGGCGGCGGCGGCGAACGCCGGCGGGGGGGACTGGGCCGTCGGGTGCGCGTGCCTCCTGGGCGCGGTGCTGGTGGTGTCCGGCACCACCGTGCTGCAGGCGGCCACCATGGTGCACTTCCCGGCGCCGTTCACGCTCTGCTCCGCCACGTCGCTCGCCGGCGCGGCGCTCACGGGGGCGTTCCAGGCCGCCACCGCCGCGGGCGGGCTCAGCCCCGGCACGCCGCAGATCAGCCTCCAGATCATCCTCTCCCTCCTCCTCGTGGGCGGGCTAGTAAGCTCGGTGTGCGTGATGTTCCAGACATGGGCTCTGGAGAAGAAAGGGCCCGTGGTGGTCTCCCTCTTTAGCCCGACGCAGACCGTCGGATCGGCGATCTTCTCGGCCTTGTTCTTGGGTAGGGTGGTCCACCCAGTGAGCATGCTGGGAATGGTTTTCCTGTTCTCCGGCCTTTATGTCGTTCTGTGGGCTAAGAAGAAAGAATGCCAGGTTGACAGAATGGTTGAGGACGGAACAGCCAACGACATAGAGAAACCGCTGTTATTTCAAGATTAG</cdnaseq>

Protein Sequence

<aaseq>MAPAATGGGGGEDDAAVPLLLPVLPPAAGWCSWEWEDVAISAGLVAVQLAGAAYMVVLAPVLALGLDPLFLVTFGSLATGLFTLPFAINLERKRWPSHLNANHLLLRLFLLALGGVTVFQALMLHGMKKTSPAIASTMPNLAPVFIFVVAACLGFERVDLSCRYTRAKIAGTVLCLAGAVTMSVLQSPAAAAATRSSSHRTTTAAAANAGGGDWAVGCACLLGAVLVVSGTTVLQAATMVHFPAPFTLCSATSLAGAALTGAFQAATAAGGLSPGTPQISLQIILSLLLVGGLVSSVCVMFQTWALEKKGPVVVSLFSPTQTVGSAIFSALFLGRVVHPVSMLGMVFLFSGLYVVLWAKKKECQVDRMVEDGTANDIEKPLLFQD</aaseq>

Gene Sequence

<dnaseqindica>1..344#791..1316#2342..2493#3194..3329#ATGGCGCCAGCGGCCACCGGCGGTGGCGGCGGCGAGGACGACGCGGCGGTGCCGCTGCTGCTGCCCGTGCTGCCGCCGGCGGCGGGGTGGTGCAGCTGGGAGTGGGAGGACGTGGCGATCTCCGCGGGGCTGGTGGCGGTGCAGCTCGCGGGCGCGGCGTACATGGTGGTGCTCGCGCCGGTGCTGGCGCTCGGCCTCGACCCGCTCTTCCTCGTCACCTTCGGCAGCCTCGCCACGGGCCTCTTCACCCTCCCTTTCGCCATCAACCTCGAGAGGAAGAGATGGCCGTCGCACCTCAACGCCAACCACCTTCTTCTCCGCCTCTTCTTGCTCGCCCTCGGAGGGTATGCATGTATAACATGTCAATCGGGAAGTGGATTTTAATATATCCTCTCATTGTTTACATCGTTTAGATGTCACTTAAATATTATGACAAAAACTAAGAAAATGTATTAACATGTGATATATCGCTCCATAAATATACAAGAAAAAAATTTAAACTTCTACATCTCGCAACGAAAAAAATAAATTTGACTCTAAATATATATTAACTAGTTGTAGTTTAATTTGTTTTTTTTCATTACGAGATGTACAAATTGAATTTGAGTGGAGTATTATATCGCGTATTAATACACCTTTTTTTTATCACAACCATTTAAGTGACATGAAAAAAATAAAGGGATATTCCCTCGAGAGATTAAAATAGTTTTCCCGTCAAACGATTATTATCACATTTTGTGCAAAACATGTCTGATGACAGATTTATATCGATCCTTGTCGTTGGCTGCAGGGTGACGGTGTTCCAGGCGCTGATGCTGCACGGCATGAAGAAGACGTCGCCGGCCATCGCCTCCACCATGCCCAACCTCGCCCCGGTCTTCATCTTCGTCGTCGCCGCGTGCCTCGGCTTCGAGAGGGTCGACCTCAGCTGCCGGTACACGAGGGCCAAGATCGCCGGGACGGTGCTGTGCCTCGCCGGCGCCGTCACCATGAGCGTCCTGCAGAGCCCCGCCGCCGCCGCCGCCACGCGTAGCAGCAGCCACAGGACGACGACGGCGGCGGCGGCGAACGCCGGCGGGGGGGACTGGGCCGTCGGGTGCGCGTGCCTCCTGGGCGCGGTGCTGGTGGTGTCCGGCACCACCGTGCTGCAGGCGGCCACCATGGTGCACTTCCCGGCGCCGTTCACGCTCTGCTCCGCCACGTCGCTCGCCGGCGCGGCGCTCACGGGGGCGTTCCAGGCCGCCACCGCCGCGGGCGGGCTCAGCCCCGGCACGCCGCAGATCAGCCTCCAGATCATCCTCTCCCTCCTCCTCGTGGTAACTATTTCCTCCGTCATAAATGTTTGACGCCGTTGACTTTTTTAACCATGTTTGACCGTTCACCTTATTCAAAAAGTTTAAGTAATTATTAATTCTTTTCATATCATTTGATTTATTGTTAAATATACTTTTATGTTTATATATAGTTTTACGTATTTCACAAGAGTTTTTGAATAAGACGAACGGTCAAATATGTTTAAAAAAGTCAACGGCGTCAAATATTTAGGGACGAAGGGAGTACTATATATAGTGAAGTAGTATATACTCCCTCCATACTTATAAAGGAAGTCGTTTAGGACAATGTTTAAGTCAAACCTTAGAAATATAAATCATGAATAACTCTCAAGTTGTTGAGTTTAAAAATATAAAAATTATATGAATAGATTTGTCTTGAAAAATACTTTTATAAAAGTATACATATATCAATTTTTCAATAAATATTTTTATAGAAAAAAGAAGTTAAAGTTGTGTTTTGAAGACCGTGTCGCTGTCCTAAACGACTTTCTTTACGAGTACGGAGGGAGTATACTAGTTAACACATCAAATTAAACCATGAATGATGAATATGCAGATTGATCAACACTAGCGCTTGCCTAGGCTAGCGGTGAACCGGCCACCACCACCGTCGCAACCAGCATAATTAAAAAAAACGAGATTTGAAAGGAGAGACGTTTTCCAAATATTTTTTAAGAAGAAATTATGAGTGTATTAGAGATTGAATGGGGGATCTTAGGGTTGAACACTACCACACACACCTTTGTTACTGCACTATCAAGCAAATCTCAATTCCATAACCAGCATCACTATCGTTCCTTATTATCCGGTAGCGAGCAATCAGTAGTGATTGATCGTATCACTGTTGATACATACCGGTTTAGACTTTAGGAAAAGGAGAAAAAAAACATTATGAGGTGAACTGGCAATGATGAGTCATGCATGTTAATGTTTGTTTTATTAGCGTAAGGAATAAGGATGCTACGGGTGACTATTGATGGATGGATCATGGAGGCGTATGTATGCAGGGCGGGCTAGTAAGCTCGGTGTGCGTGATGTTCCAGACATGGGCTCTGGAGAAGAAAGGGCCCGTGGTGGTCTCCCTCTTTAGCCCGACGCAGACCGTCGGATCGGCGATCTTCTCGGCCTTGTTCTTGGGTAGGGTGGTCCACCCAGTGAGGTATAGTTCTTCTCTCACTATGTGCATATATATAGGGCATGTTTGGTACAGCTCTAACTCATAAATATAACTCCAGGAGTTGAGTTTGGAGTGGAGTTGTGGAGCTGCCAAAACCCAGCTCCACAACTCTAGTACATTTTGTGAGAGAACTCCACCCAACTCCACTCCCAATTTTGGTGGAGCTGAAACTGTTTGGTTGAGCTCCAGCTCTGGAGCTGGAGCTGTGCCAAACAGGCCCATATACTCACTCTCTCCATTTTTTAAATAGATGACGCTATTAACTTTTGAATACATGGTCGACCATTCATCTTATTTAAAAATTTTATACAAATGTATAAAATATAAATTATGCTTAAAGTACTTTAAGTGATAAAACAACTCACAACAAAAAAAATATATAATTACGTAAATTTTTTAGATAAACTGAATGGTCAAATGTGTGATAAAAAGTCAATAACGTTATCTATTTGAAAAACAAAAGTAGTATATACCTAAAAATCTAATGGATTCATTGGGTCTAATCTATGTTAAGCGAAACATGACATGTAGGACCTCTTGAAACAACAATAATTGTGCTAACATAAGTTCAATGTGTACCGCTTGTGTTTAGAACCTTAGATATGCATGACTGCAATTTAGTTCGTGCTAGATTTTCCAAAAGCAAACTGATTTGCTCTTGGTTATGTATGGATGCATGCAGCATGCTGGGAATGGTTTTCCTGTTCTCCGGCCTTTATGTCGTTCTGTGGGCTAAGAAGAAAGAATGCCAGGTTGACAGAATGGTTGAGGACGGAACAGCCAACGACATAGAGAAACCGCTGTTATTTCAAGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024300