BGIOSGA024317

From RiceWiki
Revision as of 06:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024317| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024317, complete gene.| tag = P0640E1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA024317

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024317, complete gene.

LocusTag

P0640E12.105

Ensembl Transcript ID

BGIOSGA024317-TA

Ensembl Protein ID

BGIOSGA024317-PA

Length

4359

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:15658046..15662404

Sequence Coding Region

15662253..15662404,15662097..15662136,15661556..15661606,15660654..15660739,15658760..15658897
,15658508..15658655,15658046..15658138

Genome Context

<gbrowseImage1> name=IndicaChromosome07:15658046..15662404 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:15658046..15662404 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGGATAAAGCCGAAGCAATTGCTAATTCAAAGCAAGACGAAGAAGGCCCCAACACGGATCAGTTACTCCACTATCGTTACTTGGAACCTAATTGTTATCTTGGTTGCGCTATCCCTCTATGCTACCTACAGGCATTGGCATCACAGGCCAATGCTCGAGACTGAAATGGATCTCCCTCGTGCTGAGCATGTTGGAAGATCTGAGGATTCCACGAAGACTAGTAGACCAAGCTATGCGGTTATTGATACTGCCAAAGGCTCAATTACTATAGAAATTTACAAAGATGCTTCTGCTGATGTTGTGGATAGATTTGTTAGCTTGTGCAAGAGTAACCATTTTAAAGGAATGCCGTTTCGTCATGTCATCAAAAACTTTGTAATTCAAGGGGGTGATTTCGATTTCAATGGTGCTGCCCAGGAATGGATACTGAAAGCCAAAGCCAGTGGAGAAAACGCTCTAAGTCCAAAGCACGAGGCATTCATGATCGGGACTACGAAGAATCCTAATAATAAAGGATTTGATCTTTTTATCACAACTGCTCCAATTCCTGACTTGAATGACAAGCTTGTTGTATTTGGGCAAGTTATCAATGGACAAGATATTGTTCAGGAGATCGAAGAAGTTGATACTGATGAGCATTACCAGCCAAAAACCCCTATCGGCATACTCAACATCACGCTAAAACAGCAAGCTTTGAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MARIKPKQLLIQSKTKKAPTRISYSTIVTWNLIVILVALSLYATYRHWHHRPMLETEMDLPRAEHVGRSEDSTKTSRPSYAVIDTAKGSITIEIYKDASADVVDRFVSLCKSNHFKGMPFRHVIKNFVIQGGDFDFNGAAQEWILKAKASGENALSPKHEAFMIGTTKNPNNKGFDLFITTAPIPDLNDKLVVFGQVINGQDIVQEIEEVDTDEHYQPKTPIGILNITLKQQALS</aaseq>

Gene Sequence

<dnaseqindica>1..152#269..308#799..849#1666..1751#3508..3645#3750..3897#4267..4359#ATGGCGAGGATAAAGCCGAAGCAATTGCTAATTCAAAGCAAGACGAAGAAGGCCCCAACACGGATCAGTTACTCCACTATCGTTACTTGGAACCTAATTGTTATCTTGGTTGCGCTATCCCTCTATGCTACCTACAGGCATTGGCATCACAGGTTAGTGCCCTTTCTTGCAATATTTGTTGATTTGCTGATTTAGTAGCTAGTCCCAAGCACAATTGATCTAGCTTTACTTGCTTTTTGACTTCCTTCACTGATGAGATACCTCACAGGCCAATGCTCGAGACTGAAATGGATCTCCCTCGTGCTGAGGTACGCTAAACAATCTAGTTCATGCCCTATATGCTCTTCTTGTCTTGCTTTGTCTCCAAGTACTTCCTCCTTTATGCCAATGACATGACATGTTTGGGTCTTGGAAAACACCGTGTCTCTGCCTTTTCTGAATCATTGATCCTAGCATTTTGTTTTCCATCTATTTTGAAAACCTTCTTGTTCTATATTTAATGTCCAAATCATATGTATAGTTAATGACCATTGGAACTTCTGTGTTAGTGTTGTAAAATGAGCCATGGTAAACCTTGTTTGCAGCAAATACATGTGTCTTCCTTTTCTTATATAGGTTCGATAATATGCTATGTTATAAATATGACATTTTCTATGGACTTGCAATGGCTTCTGTAGGTGATTTGTGTCCTTATATACATTTTTTTAGAATGACGATATCTGCTGATACGAGCCATACTCAACCTGACATCAAATTCATCGATTTTATTCTCTTATGTGTTCTCTTCCTGACTTCCAGCATGTTGGAAGATCTGAGGATTCCACGAAGACTAGTAGACCAAGCTATGCGGTAAGTTGTACTATTTTCCTTTCACAGGACAAGATTTCTGACCAACTTAGCAGCATATGATGTTAATAAAAATTATATGCCCGATTGTCTTTTAAGTGTGTTGTTAGTATATATCGGGTCAATTTACAATTGTACATGGTACGTTAATTATGTCTTGCTCTTCTGTTGGTCTGGTAGTGACTGCTATACCAGGTTTTGATCTAAATCTTGTGGTATGTTATGCTTTGGAAATGTTGCAATCAACTATTTTCCTGCTTAAAGTAGAATTGAAAATAAGTACACCATGCATGGATATAAACAAATTATCCTTAGGGTAGTCCTTTCCTTATGCACAAACCCTGAACTCCTGAAGGCCTTAACAAGATAAAGAAAACTATCCTTGCCATTGTTGGATTAATCATCAAGTTTTAAATAATCAAAACTCCATAAAAAGACGATGAACTAGTGTTCATCCGGAATTTAGTAGGTTAAGTAGTAATAGTTTTACAGGCTTGAAATGCTTCTGCCAAATGTAGTTAATACTTTCATATCTTAAACATTGTGGTTTTATGCTGCAGAACTAGACCTGATGCACATCCTTTTCTTGTTATGAACTTATGATGTTTGGATGCTAATTATTAGCAGTACAAGCATACAATTTGTAAGAGAAGTAGATTGTATGCTATTGCCTGTAAATATAGGAAATTAAATCTGATGCATATAACCTTTTTTTATGGGAATTTGTGCATATGACCTTACTGAGTAGACATAAAATATTTAATGCAACAATCTTAAGCATTCACTGAACATAATGCTATTGTAATTTTCTTCCTCCAGGTTATTGATACTGCCAAAGGCTCAATTACTATAGAAATTTACAAAGATGCTTCTGCTGATGTTGTGGATAGATTTGTTAGCTTGTGGTGAGCACTGGAATCTTTGCTTAATCTTGTTTTATACTTTTACATGATAATGCTACATGGATGTTGACTTGTCTATGATCATTTTTGGGGCATTATTTGCTTGTGTTGGACTCTCTGGCTATCCTCAGTGGTGCAATTCCACACAAACATGTCATATTCAGTCCCTCTGATTATTTCATGAAAGATACAATTAGAGTATAAGTATCTAGATATGTAATCCATATAATTTTAAGATGGATTGTTGATAAATATATAAGGCTTGCATGCAAATTTAAAGGTCCTTTTCCTATCATGCTCCTATTGATGGTAACTTGCATAGTCCACCCATACAAGGCATCCACTCTCTTCTTTTCCAAAACAGTTACTAAAATGCATTTTTAGTTCCAAACTCTCCTACTTTCTCAATTTCGTAAGCTCCTTAATTCTTACTGAGTCAAATAGACCCCTATTGATTTATGAAGGGAGCATGAGCTATTAAACTTTCTTCAAGATTTTACACAAGAAGTTTTCAGCAAAAGGGTGTGCACTTCTCCCTCTAGTGTACCTTTTTTTGTGGACAGATTCTTCTGTGTTCCCTATTCCTTTCCTTTGCAAAATTTCTTTCTTTTCTTGTGTTCTTGGCATCAGCTTTATTTCTTTGAATACTTTGATCATAATGGATCTTTCTATTTTATTGATAACACATCACACATTGCAGTAATGAGTTAGACAGCTAGTGATCGCAGCATCATGATACTATTAATATGGTTGATAGTCTAGGCACTTGTTTTGGATCCAAATAGATGAAGTTGGTTGCTTGTATCTTGCATAAATGAATGATACCTTAGAGTTTGCAGCAGAATATATAAACCTTTATGGTTGCATGCAAGGTTCTTGAATCCAGTTTCTTGTAAAGATATTGCTTGGTAGGCTATTCCTGTGTCATTAGTCATGCAAAGAATGTAATCAAAGCAACAAATGAAATCTTTTTAGAGGTTGATGAATTGAAATCTGAAGACAACTGTATTCTACAATACTTCCAAGGCAAAAAAACACTACATTTTATTTGTGAAGTGCTTTTATGCTCACCGAAAGCAAGATCACATGAACTTCAATGCGAGTAATTTGAAGCAGGCTCATCATGCTCACCGATTAGCAACTCTAAATGCTTAATGCTCACAATATTTGTTCTTTGAGGTCAAGAAGCCAACTATGATTTATTAAGTACAGTGTGATAAACTGGTTTTGGTTTTGAATATGCGATGTATGATAAACTGTAGTCTGAGATGAGATGATGCTTTACATGTAGCAGCGTGTTTGTAGCGCAAACATATTTGCTACTCCCTCCGTATCGAAATGTTTGACACCGTTGACTTTTTAGCACATGTTTGACCGTTCGTCTTATTCAAAAACTTTTGTGAAATATATAAAATTATATGCCTACATAAAAATATATTTAACAATGAATCAAATGATAGAAAAAGAATTAATAATTACTTAAATTTTTTGAATAAGACGAACGGTCAAACATGTGCTAAAAAATCAACGGCGTCAAACATTTCGAAACGGAGGGAGTATTATGGTATTTGTTATTTGTACCATATTGCCCTTCAGGATGTCTCGTAGTCTAAGAGTAACTAGTACAATTTCTCTAGGCTTGCATTGCTGGAAGGAATCATGTTTCAAAGGAGAATAGCACACATGTTAAGAATTTATCAAGATAAATTATCCTTTTGTCCTCTTTGGATTATCATCTAACATTTGTTTCAATTGCCAGCAAGAGTAACCATTTTAAAGGAATGCCGTTTCGTCATGTCATCAAAAACTTTGTAATTCAAGGGGGTGATTTCGATTTCAATGGTGCTGCCCAGGAATGGATACTGAAAGCCAAAGCCAGTGGAGAAAACGCTCTAAGGTTTGTCCCCAAATCAATGCACATATAGAATTCTGTTGAAAAGTCTTGGTTTTGCCAGACTTATTTTTTTTCTTTACACTACGTGTATTTCTATGATTTTGCAGTCCAAAGCACGAGGCATTCATGATCGGGACTACGAAGAATCCTAATAATAAAGGATTTGATCTTTTTATCACAACTGCTCCAATTCCTGACTTGAATGACAAGCTTGTTGTATTTGGGCAAGTTATCAATGGACAAGATATTGTTCAGGTACTTTACATTGAATTCTCTCTGGATGCATTAATTCAGTTGCAGTTTCCATACATCATTGGAACCTTTCATTTTTCATTTATATTTAATATCATTTTTCTAAAAACAATATATTTCATGCTCCTTACCTCATGATTAGTATTGTTACATATTTGTACATTATTTTGAGTTACAGTAGTGCTATATGCCAATAGGAAATTGAAAGAGTTAGACATGAGTTTAATAGGTGTGCTAATGGAGAGGATATGAGCTAATTCAATGTCATTATCTACAAATGTATCAGACGCATGTGCTTCAACTGGTTGAATTAGTATTTTCTGAGTATGTTCATTTTAATGAGACTTTTTGCTTGTTTGATGACTTAAACAGGAGATCGAAGAAGTTGATACTGATGAGCATTACCAGCCAAAAACCCCTATCGGCATACTCAACATCACGCTAAAACAGCAAGCTTTGAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024317