Os12g0121300

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Revision as of 10:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0121300| Description = Similar to Phosphoethanolamine cytidylyltransferase| Version = NM_001072556.1 GI:115487073 GeneID:4351359| Length = ...")
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Gene Name

Os12g0121300

Description

Similar to Phosphoethanolamine cytidylyltransferase

Version

NM_001072556.1 GI:115487073 GeneID:4351359

Length

5692 bp

Definition

Oryza sativa Japonica Group Os12g0121300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1004449..1010140

Sequence Coding Region

1005023..1005094,1005478..1005600,1005682..1005747,1006235..1006355,1006542..1006609
,1006798..1006869,1007402..1007583,1007995..1008230,1009592..1009926

Expression

GEO Profiles:Os12g0121300

Genome Context

<gbrowseImage1> name=NC_008405:1004449..1010140 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1004449..1010140 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgggggcggggagcagcagcgccaagctggtggcggcatgcgtcatcggcgggatcgtgctgggggcgtccgtggtcgcgctccacctcgccgggcccgtcgccattcccgccctgccgcccgtcgacgcgctccgccgcaggttccgccgcggacgccgacgtcccgtgcgcgtctacatggatggctgcttcgacatgatgcactacggccactgcaacgcgctgcgccaggcgcacgccctcggggacgagctcatcgtcggcgttgtcagcgacgacgagatcaccgccaacaagggcccgcccgtcacgccgctccacgagaggttgataatggtccgtgctgtaaaatgggtgcacgatgtcattccagatgcaccttacgccataactgaagattttatgaataaattattcaatgagtataatatagattatatcattcatggcgatgatccttgtctgctcccagatggtactgatgcatatgctcttgccaaaaaggttggtcgatataagcagattaaaagaaccgaaggagtgtcaacgacagacattgttggaagaatgcttctttgtgttagagagagatcagcttctgatagtcacaaccactcttcactacaaaggcagttcagtcacgggcatggccagaaaattgatgatagtggatctggaagtggaactaggatatctcattttcttcctacatctcggagaatagttcagttctcaaatagcaggggtccaggtccagattctcggatagtgtacatagatggtgcatttgatctattccatgctggacatgttgagatattgcgcctcgctcgagagcttggagatttcctgcttgtgggtattcacacagaccagactataagttcaacaagaggaccacatcgcccaatcatgaacctccatgagagaagtttgagtgttttggcttgccgttatgttgatgaagtgatcattggtgctccatgggatgtttcgaaagatatgattaccacatttaatatttcgttggttgttcatgggacaattgctgagaatatggactttatgaaggatgatttaaatccatatgctgttccaagggctatgggcatctaccgtaggctggagagccctttagacatcactactagtactatcataaggaggatagttgctaaccatgaagcctaccagaaacggaacgagaagaaagaagccagtgagaagaagtactacgacagtaaaagctttgtcaatggagagtaa</cdnaseq>

Protein Sequence

<aaseq>MEAGAGSSSAKLVAACVIGGIVLGASVVALHLAGPVAIPALPPV DALRRRFRRGRRRPVRVYMDGCFDMMHYGHCNALRQAHALGDELIVGVVSDDEITANK GPPVTPLHERLIMVRAVKWVHDVIPDAPYAITEDFMNKLFNEYNIDYIIHGDDPCLLP DGTDAYALAKKVGRYKQIKRTEGVSTTDIVGRMLLCVRERSASDSHNHSSLQRQFSHG HGQKIDDSGSGSGTRISHFLPTSRRIVQFSNSRGPGPDSRIVYIDGAFDLFHAGHVEI LRLARELGDFLLVGIHTDQTISSTRGPHRPIMNLHERSLSVLACRYVDEVIIGAPWDV SKDMITTFNISLVVHGTIAENMDFMKDDLNPYAVPRAMGIYRRLESPLDITTSTIIRR IVANHEAYQKRNEKKEASEKKYYDSKSFVNGE</aaseq>

Gene Sequence

<dnaseqindica>5047..5118#4541..4663#4394..4459#3786..3906#3532..3599#3272..3343#2558..2739#1911..2146#215..549#gagacaagagagagaaccagaggcggcttctcccctcccgcatctccctgatctcctcgcgtcgcgccctcccctcgaatggcgatacctcctccaccctcgcgccccaatccctaaccctagatccctcctcccacgctctctcgcgcacgaccaatctccctcttccttcctgtctctctccttctcgcactgctcaatctcccaattcattatggaggcgggggcggggagcagcagcgccaagctggtggcggcatgcgtcatcggcgggatcgtgctgggggcgtccgtggtcgcgctccacctcgccgggcccgtcgccattcccgccctgccgcccgtcgacgcgctccgccgcaggttccgccgcggacgccgacgtcccgtgcgcgtctacatggatggctgcttcgacatgatgcactacggccactgcaacgcgctgcgccaggcgcacgccctcggggacgagctcatcgtcggcgttgtcagcgacgacgagatcaccgccaacaagggcccgcccgtcacgccgctccacgagaggttcactccatacccttcgtcatttttttttaaaaaaaatcttgaatgatgcacgatgtaatcctaccaaactgttgcctgatactggttgtgcactttaataatgattcaggcaaaatggcaaattagccttataggtagtgaattctcctctacatatgtacccgtcagtttcaatttgtgcactagttctgcagttttctgtggacatttcaagttcttgggggtaactgttgtgggttgttcgatcttttgctggtttaatgggttagctgagaagctgttgcatcaaacttcctatcttctgtttcaatttcagctgcacactgattctgtcctaatcatggggaatatgttactgcttttactatttcataacttaatttgtatcacacgctgatttgtttcagtttcgactctttagttgcgttcaatgtactgttgcacaatacaagttactagtggagcgcttttatagggatatcctcagattagtttttgaagatgcaacgttttccccccacacatcatatatgtgtccgtcggtcttaatttgagcactagtccagtaattctatctggaaactttgaaattgctaagggaaatgttgtgacatgtgggttgtagttagtcgtcggaccaagtttctgataactttggtggtggatgagctgcatatgtttctctaattcatttgagagtatggattcaatatctgtgcagtaaccaaaaagattagctctatttcttttgggtgcctgaaggagaaacacagaaaaaaaaaaggtttgctccgctgaaaagtactaaacagtgactttttggtctgtacattcatacaaatccaaaaaacttattaactcctaacgataaaccatactagacttgcaggtttggttctgcttagtttgccttaagtacctgctaagtgattccttgctttcctttgtcttgttgataatcacaagctgctcacatatgacatggtatgtgtggcattttagatgttaggcgctgcaacctttttttcctcatttaatcatcatcatggtagtttagcaacactataaatttgttatttttgctggttttcttttgttgtttactgactttcattgtgtctggttttccagtttaggagttactgcacatattggtttttttttctttctatttttagttgtgttaccaatcttacgtgtgaccccaggccgtatggaattttgggcatttttgtccttttagacttgcagttttgtttctttgaatgtattatgtattatcatatactcatattttctacttaaaaaaaccattttatttggaatgatttttttatgtttctttttctgatatacaggttgataatggtccgtgctgtaaaatgggtgcacgatgtcattccagatgcaccttacgccataactgaagattttatgaataaattattcaatgagtataatatagattatatcattcatggcgatgatccttgtctgctcccagatggtactgatgcatatgctcttgccaaaaaggttggtcgatataagcagattaaaagaaccgaaggagtgtcaacgacagacattgttggtattgattctgttcttttctgttttaatcattaaagtttttactcatagtgaaatttaacctaaaacttccatcgcaagggaatatatggtttttgttatgtactacaactttacaagttatttctttggctcaataccatagcaatttccaacattacaattatttataggtcaaccaaataattgtttgtagacaagatcaatgcccacctgatttgtcctgaagtggtactttaggaaaacattcaaactattgctttattatcatatgatgaactgataagctattaagctctccagacaattaactacataattcccttctgtatcaataaattgcttatggtcatgaataggttttattttcatgctaactgcccagctcatctttctagtaaataaactacaggaagaatgcttctttgtgttagagagagatcagcttctgatagtcacaaccactcttcactacaaaggcagttcagtcacgggcatggccagaaaattgatgatagtggatctggaagtggaactaggatatctcattttcttcctacatctcggagaatagttcagttctcaaatagcagggtacagctctttacattctttcacggaggatcattttctgaactgctcatgtaaaactttgaatgtcatttttttttgagatatcatattttttgaaggcatgaattaaacattgacagcataaaaatgcctcatagatggttttttttttttgcctttaaacagtagagcacgagttatttggctttcaggatcctgttaccattttactattacttttgccatttgaaagacatttgttgtttggttgcattctttatctagtaaacattgagttgaatgacctgacgacaaatggattatttcacaacttagatttgttctgaggttatattaataaagaatataagttatatccttgaacttccaacaagaactaacatgctgctaagctcaactattaattaatcattgcattagtcgtttatcatttatttcaagctgtttacatttgatactattcactagataaaactacttgctgagtacggccacttattctttctgttgactgtcagctttacctatgcagggtccaggtccagattctcggatagtgtacatagatggtgcatttgatctattccatgctggacatgttgaggtaaacgcaatgtcaaatgtctgtctcagcatgtagagcaacttggctatgcatttgttggttgtatggttttacctgtggttttccttttccttttctttttcttattgcaagggtgcaaactgaaatgatctttctaagacatagtgatttggacttcctgtgtatttatagtttcttctacttagatattgcgcctcgctcgagagcttggagatttcctgcttgtgggtattcacacagaccagactataaggtaataatgatggttttttttttcactgtctcaatttttccaagttacaatgcttgtactgtttttcagttttgcatcttagtttatagtcaggttgtatttgtattgaagcatagcatctctactcaattccgtcgtcataacattctgtttttgggggcacttggtgtttactgtatttgccagttcaacaagaggaccacatcgcccaatcatgaacctccatgagagaagtttgagtgttttggcttgccgttatgttgatgaagtgatcattggtgctccatgggatgtttcgaaagatatggttagttttctgttctactttatcatgatgctctcttactgtagtaggaattgcttgatgcaactgctagtaatagttcattgaacatggcacagctatgcatgcacagttcaaagattgaacatgatatttatgctacgccagcaaaagccttgctcacagctattattgattttagatacagattaacagatatggtctgatttgtgcttatccatgattttttgcagatgcacgatttgcacgtagcgttaattttgtcagtcaaataaactaaaagtttaggagctggcttggttccaaaagtttaatttgatgtagtctaagtttccgttagatatgttaagaaccagattatgtatttgtatgcaatattatcattgaaattgactatctgaaattcatacccttaactgttacttatgattatcagggtatgtgtctttgcagtgtggctggaggtagctaatttcctttttctatgcagattaccacatttaatatttcgttggttgttcatgggacaattgctgagaatatggactttatgaaggttacttacacaatacattttcttagaatataaagatgtatagcattgatcattaacaactgttacttgtgcacctatcaggatgatttaaatccatatgctgttccaagggctatgggcatctaccgtaggctggagagccctttagacatcactactagtactatcataaggaggatagttgctaaccatgaagcctaccaggtatgtaacatggtatattggtgctacgtcaaattggctggtggagtctggtttttctgtttggtgcatgcagcatgtagtaaagtacataatcccagtcaaataaatgcgatttgcctgttgtctacttcatattaatgatgtgtgtacatgatttattataaaccgatgtttgtgataatgtgttagtgttttcttgaagccctttgcatatgcgctttaaatatttatctgtttctctgggaccaattttttcatgctataactacgctcagcaacatgttgtttggtgtggggacttggtgtagtttgcatttatttattctggtccattgatgtgctgtggttttgttcatttttagtctgtggcgttgcttttgcagaaacggaacgagaagaaagaagccagtgagaagaagtactacgacagtaaaagctttgtcaatggagagtaacttaggaacaggtcttgcattaatgctattgcccagaagtttagttcacaaccttctggcacaaatgcagcggttagatgatccacaattttacagtcttgtggtaactattctcatgttgctgatatagctcaggaaacttcagatgctgatgatggtgctgacttgggtgatgctggagaccctattttcctgtatatggggctttgtggctgccaataccagctgtgttattttgagatgggtagttttttttttgttcaggattgttgtagagtatgaatgttaagcttgattaactattcctgatgctttatttcggagttgccaagtatatgtggcatcatcttatgagagtctgtcatgtggggaatgcactacgtccgcaggcgcaaggatcagcgacaacagcaaaacggcaaacagtagatatgcaggatttgttttcgtttgtttcagagtctgttaaagtttgttagtttgatctttatctctaagagtttgttagatggcattgtaatctttacttaaagggccagtatggcgcatggaataaacaagcaatcagaaaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0121300, RefSeq:Os12g0121300