BGIOSGA024397

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Revision as of 06:12, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024397| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024397, complete gene.| tag = P0673E0...")
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Gene Name

BGIOSGA024397

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024397, complete gene.

LocusTag

P0673E01.20

Ensembl Transcript ID

BGIOSGA024397-TA

Ensembl Protein ID

BGIOSGA024397-PA

Length

6329

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:13073185..13079513

Sequence Coding Region

13079471..13079513,13077430..13078022,13076839..13077171,13076338..13076508,13073474..13075230
,13073185..13073197

Genome Context

<gbrowseImage1> name=IndicaChromosome07:13073185..13079513 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:13073185..13079513 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCTGCCGGCAGGGACCCGCTGGCGACGCCATCCTCCAGAATGTATTACCGCAGGCAAAGGAAGGCTTCTTCTGAGGTCAATGCCAATGTGTTTGTGCCTGGGGGTCAGAATGGTATTTCATTTCCTGCATCAAATAGGGCTCATGATTGGGGATATGGTGGTGTTCGCGAAGAATGGGAAGCTAGTTATGCTCGCAAACTCCAGTTGATCAATTTTCTTTCTTCACTGCATCAACGCACTGCAAATTCTTTGATAACCACTAGAATGGATGCTAACATGGACACTCCTTTGGAGCAAAAACAAAAGGACAGCTCAGCAATAGTAGTTCTTGATTCTGATGATGAGGACGAAGCAGAAAGATGTGAACAGCTCGCATCTGAGAACAATAAACAACAGGCACCATCTGGACCAACTAGTCCTTGCACAACATGGATTGTATCCAGTGCGAAAGACCAAGTAAATGGAACCTTGCATGTTGATGGAGTCCAAAGCACTCAAATTGTTCCATATGGTCAAAATGCACCTTTAATAAATCAGTCCCCTTTGCAAACCAGCTGGCAACCATCTATCCAATATGAAAGGGTTATATTGCAGAGAAGACCTGAGGAGCAACGCGTTCAAGATCTGGTGGCAGCAAGCCATGCAGAGAAGATAGCAGAAACACAAGTTTTCCTTACTCTGCCTACTCTTCCTAATGAGAGAAAACGAAGGAAATCAGAACCCACCACCCTGGTAGATGGAGATGGTGGAACTAACCTAGGGAAAGGAAAAAGGAAAAATCATCAAAATCAAGCAGCAGTTGATTCAATCTTGGATTTGCAACAAAATGTTGTTCCTTTGCAACAAAATGATGTTCCTTCACAAAGCTACAGGACTATGATAGAAGAGGAGAAACCTGTAAAAGAAAGTGATGGTCTCGAGGATCTTTGGAAAGATTTTTCATTGGCTGCTGAATGTACAAAGCTTGATACAAATGAAGACATGTCCAATGAAAAAGATGTGGATGATGAAAACGAGATGGATGACGATTGCAATCATGACATTCGGATTCATGAAGATCTAGGCCATGTATGCCGTATTTGTGGCATGATTGTTAGAAAGGCTGAAACAATAATTGATTATCAGTGGAAAAAGGCTTCAAGGACAAGAACAAATTACTATGAATCACGTTCAAAGGATGCTGATGATATTGATACTGGTGCTGTTAAAGTTTCCGAAGATTTCATTGTCTCTGATATTGCCATTCATCCAAGACATGCGAAGCAAATGAGACCACATCAGTTGGAAGGATTCAGCTTCCTGGTCAAGAATCTAGTCGGAGACAAACCTGGAGGTTGTATTCTAGCTCATGCTCCTGGTTCAGGGAAGACATTTATGCTCATAAGTTTCATTCAAAGCTTCTTAGCAAAGTATCCTTCTGCAAGGCCCCTCGTAGTGCTTCCGAAAGGGATTTTAGGTACTTGGAAGAGGGAGTTTCAGCGGTGGCAAGTGGAGGACATACTACTATATGATTTCTATTCTGTTAAGGCTGATAAAAGAACAGAGCAACTGGAAGTCCTCAAATCTTGGGAAGCCCGGATGAGCATACTATTTCTTGGATACAAGCAGTTCTCACGAATCATCTGTGGTGATGGAGATGGAAACATTGCAGCTGCGTGCCGGGACAGGCTGCTTATGGTCCCCAACCTACTTATACTAGACGAGGGTCATACACCAAGAAATCGGGAGACAGATGTACTGGCATCACTAAAAAGAGTCCAAACACCACGCAAAGTGGTCCTGTCTGGTACACTTTTCCAGAATCATGTTTCGGAAGTGTTTAACATCTTGGACCTCGTGCGCCCTAAGTTTCTCAAGATGGAATCATCCCGTCCTATCGCTAGACGTATAATGAGTCAGGTAGCAATATCAGGTATCAGGAGTTTAAAAGGGGTTCATGACAGTGCATTCACTGAGTCAGTAGAAGACACCCTGCTGAATGACGACAACTTCACTAGAAAGGCACATGTTATTAGAAGTCTTAGAGAATTAACAAAAGATGTGCTTCACTATTACAAGGGTGATATCTTAGATGAACTACCTGGCCTAGTGGATTTTAGTGTGTTCTTGAAACTCAGTACCAAGCAGAAAGAAATTGTTCACAAGATAGAAGCCTATGAAAAGTTCAAAAGAAGTGCGGTGGGGACTGCATTGTACATTCATCCCTGCCTGTCAGAAATTTCAGAGGGTGATGCTGCAGATAGGGCGACCAACTTGACAGATGCCACTGTTGACAGCTTGATTGAGTCTATCATCATTAAAGATGGGGTGAAAGCCAAGTTTTTCTTTAACATTCTGTCTCTTGCTAACTCTGCAGGAGAGAAGTTGCTTGCCTTCAGTCAATATATACTTCCCATGAAATTTTTGGAAAGGTTGTTGGTTAAGAGGCTGGGCTGGCATGTAGGGAAGGAGATTTTCATGATATCTGGTGATACTAGTGCAGACGACAGAGAAGTGGCGATGGATCAGTTTAACAACTCTGCCGATGCAAAAGTTTTGTTTGGTTCCATCAAGGCCTGTGGAGAGGGAATCTCCCTTGTTGGTGCATCGAGAGTCATCATTCTAGATGTTCATTTGAACCCATCTGTCACCCGTCAAGCAATTGGACGTGCATTCAGGCCCGGACAGCAGAAGAAAGTGTTTGTGTACAGGCTTGTTGCTGCTGATTCTCCAGAGGTGAAGTTCCATGAAACTGCGTTCAAGAAAGAAGTTATACCAAAGCTATGGTTTGAATGGAGTGAGCTCTGCACTACTGAAGACTTCAAACTGAATCAAGTTCATATTGATGACTCTGAAGATGAACTATTGGAGGCTAATGCTATTCGCCAGGATATCAAGGCTTTGTATAGAAGGGTGTGGCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAAGRDPLATPSSRMYYRRQRKASSEVNANVFVPGGQNGISFPASNRAHDWGYGGVREEWEASYARKLQLINFLSSLHQRTANSLITTRMDANMDTPLEQKQKDSSAIVVLDSDDEDEAERCEQLASENNKQQAPSGPTSPCTTWIVSSAKDQVNGTLHVDGVQSTQIVPYGQNAPLINQSPLQTSWQPSIQYERVILQRRPEEQRVQDLVAASHAEKIAETQVFLTLPTLPNERKRRKSEPTTLVDGDGGTNLGKGKRKNHQNQAAVDSILDLQQNVVPLQQNDVPSQSYRTMIEEEKPVKESDGLEDLWKDFSLAAECTKLDTNEDMSNEKDVDDENEMDDDCNHDIRIHEDLGHVCRICGMIVRKAETIIDYQWKKASRTRTNYYESRSKDADDIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQVEDILLYDFYSVKADKRTEQLEVLKSWEARMSILFLGYKQFSRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCLSEISEGDAADRATNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKLWFEWSELCTTEDFKLNQVHIDDSEDELLEANAIRQDIKALYRRVWQ</aaseq>

Gene Sequence

<dnaseqindica>1..43#1492..2084#2343..2675#3006..3176#4284..6040#6317..6329#ATGGCCGCTGCCGGCAGGGACCCGCTGGCGACGCCATCCTCCAGTGAGTGAACTCCGGTTCCCCCTTCGCCCTCTCCCTCTCCCTTCCTCCTCGCTCTCGTCTGGTGGCAAAGTCCCCGGAAGGGGCGGGTTCGTTTTTTTCTTTCTTCGTCAGTTCTACGGGGGTGGAGGGGTGGGGGGGTTGGAGATTATGTGTTTGATTGAGAGGATATCCTGAGATGGATTGGGATCATCGCATCTTTTACATGTGTTTGGTTTAAAGACTAGCAAGATTCCAACAGAGAATATTCGGGACAACCTCATCCAGAAATCTGGCGGACGGCGCCATCCCACCTCCGCACGCGCGGTGACTAGGGTTAGCGCGAGCAGGGGCGAGTTGGCGGCGGGAGTGCGCTAGCCGGCGGCGGCCGCGTCGTCGTCCATCCATCCACGTCGCCGTCGTCCATCCTCCCGCGTCGTCGCCCATCCTCCCGCGAACCCAGCCGGCGGCAACCCTCGGCGGTCGCTGCTCACCCTCGGCTTTTGTCTGGTTGGGCCTTTCCTCGGTGATAATGTTGGCTCGCCTCCGTTGGTCGAAATCTCCGGTGATTTTATTTTATTTTTAGATCGTGATATTATGCATTAAGCACCTGTACATGTACACCTCGATTTGAGTAGAACAAAGGTTTGTAGTATTGTGCTTGGAAATGCTCCTCGGAAACNAACCATTCATGACATTTGAGGGGAGAAGTGCTTGTTCTACTCCTACCTCATTTGTTTGTATGTTTGAGTGAACTAGGTTCTGGAATGGAGCTTCTTTGCTTTGTTTTGGAGTAATACCTGCATAATGTTTCTAGAACGCTGGTAGCGGTGGGGGGCACATTCGTCATGTTGTGATTTGAGATTCTCACGGCGTACAAGGGAGGTGTTTGTTGATGGCACTTTGGGAAGTGGGCGCTTGTCGATGGTACATATAAAGAAGAGTAGATTTCACAAAACTCTTTTAGTTTATTATGCCAAACCATGGTGATGTATGATTAATGACATCTATATACTCTAAACTATTCTTCCATGCTAATTTCAATTAATACTAATTTTCTCGTCGTGTTGAGCCACATCATCCTCAATCATTATGGTTATTGGATAGTTGTTCTGTGTCTGAGATTTGCATCCAGATCAGACTAGCCGCTCCATTCACATATCGAGCTCTTATGTGGCACTTGCCTTATGTGCTTGTTGATGTTGTTTCAGTATTGCTCACTATTATATTATAGAACATCCTAAATAACATTCTTAAATTAAGAGTTGTGCATTAAGCTCACCATTCTACTTGGCATTTGCACAGTTTCATTGTTTTGCAGACTTAGGGGCTATTCAAGCATCATTTGGTTTCCTTCCCAACCAAAACCTGTTCTTTCATGGACCTAATCTGTTGTTTTGTCTTATTCTAACTTGATACCCCAAACCACAACCAACATCTCCTCTGATTTAATCAATCTGCTGTCTTTGTAGGAATGTATTACCGCAGGCAAAGGAAGGCTTCTTCTGAGGTCAATGCCAATGTGTTTGTGCCTGGGGGTCAGAATGGTATTTCATTTCCTGCATCAAATAGGGCTCATGATTGGGGATATGGTGGTGTTCGCGAAGAATGGGAAGCTAGTTATGCTCGCAAACTCCAGTTGATCAATTTTCTTTCTTCACTGCATCAACGCACTGCAAATTCTTTGATAACCACTAGAATGGATGCTAACATGGACACTCCTTTGGAGCAAAAACAAAAGGACAGCTCAGCAATAGTAGTTCTTGATTCTGATGATGAGGACGAAGCAGAAAGATGTGAACAGCTCGCATCTGAGAACAATAAACAACAGGCACCATCTGGACCAACTAGTCCTTGCACAACATGGATTGTATCCAGTGCGAAAGACCAAGTAAATGGAACCTTGCATGTTGATGGAGTCCAAAGCACTCAAATTGTTCCATATGGTCAAAATGCACCTTTAATAAATCAGTCCCCTTTGCAAACCAGCTGGCAACCATCTATCCAATATGAAAGGGTTATATTGCAGAGAAGACCTGAGGAGCAACGCGTTCAAGATCTGGTGGTATGTATCTTTCACTTGAAATTTTTCAATGGACTATCCACTTATACATATTGGTACTTTTACTCCTTCCACAAACCTGCACTGACAAACCAATTTATTGCATCATGTCTTGTGATTGTACTTTGATAAATCTGAAGAGCGTTATGATATTTCTTGTCTGGAATGTTAGAATGGAAATGTTTGGTGTTTGTTGAGTCTATACTCTTTTGAAGCTTAAATATCTCATATTTGAACTTTAACTCTTGTTGCTCACTGTAGGCAGCAAGCCATGCAGAGAAGATAGCAGAAACACAAGTTTTCCTTACTCTGCCTACTCTTCCTAATGAGAGAAAACGAAGGAAATCAGAACCCACCACCCTGGTAGATGGAGATGGTGGAACTAACCTAGGGAAAGGAAAAAGGAAAAATCATCAAAATCAAGCAGCAGTTGATTCAATCTTGGATTTGCAACAAAATGTTGTTCCTTTGCAACAAAATGATGTTCCTTCACAAAGCTACAGGACTATGATAGAAGAGGAGAAACCTGTAAAAGAAAGTGATGGTCTCGAGGATCTTTGGAAAGATTTTTCATTGGCTGCTGAATGTACAAAGGTACAAGATGTAATCACAGATGTTCTTTTTTACTTTTATTCTGCAGCCTTATAATACTGTTGGTTCTTTTTCCAGCTGACCTCTAATTGTACTCGGAAATACATGCTGTAATCTTTATTTTTTGTTTCAAGATTGAATACCACTGTCCACAAAGTAAGTTTCATGGCAAAGTGTATTTTATAAGATAAGCTAGAGTTTGAAAAGGCGTTCATTTGTCATTTAAATCAGTTAAATGCGTATTTTGACAAAGTTTTGAAGCATTTCAGTTGATTATTTCTATCTGAATTGTGTCTTTTTCCAATAATGATCAAAGTAATATTCTTTGTCCAGCTTGATACAAATGAAGACATGTCCAATGAAAAAGATGTGGATGATGAAAACGAGATGGATGACGATTGCAATCATGACATTCGGATTCATGAAGATCTAGGCCATGTATGCCGTATTTGTGGCATGATTGTTAGAAAGGCTGAAACAATAATTGATTATCAGTGGAAAAAGGTACATACCATGTTTTGGACATATGATACTTCAAAGTTCTCAAACCTGTGATGTCTATGATTCTGTTATGGGAATGGGCCAGGCCCATGCAACAGTTTAGGCATGATAAATTAGGAATAAGTCATATAAATATAGGAGATTATCTAGTTAGGAAAGAGATGAGGTTTATTAGAAAGTTAGAGATAGAGATTGGATTGGTTTATATAATACTAGAGACTAGTTCCTTATGTGTCTAGTATGTCCTCCCTATATATAAAGGGACCCCATGTACTCTAGTATCAATCAATCAATGAATCTAAAGTTAGCCCTAAGCCTCAGAGCCTCTTTTAGCTCAGCAGGGAGAAGCCCTGCCTCTGCTATTAGAGGGCGAGTGCCCTATCCCCCGGTCTTGGGACCCTTACCTAGCCAATCCATAACAGATTCTAGTTTTACTTTGAGGAAATTAATATAAGCAGACAATCAACTTTGTGAATTGTTTTCTTCATAAAGAAACTGCAAGTTGATTATTTACATGAAACCCCTCATGTCCCATACAGTGTCCACTTTTAAAGCCCCAAGAGTCAGATCTGGTTATACTTGACACTACACACCAGCCGTATCCACTTGCCGTGTTCATGTCAAAAACCATTTTCCTCACCTCCTATGCAAATGCTATTAATATTAAGGCACAGTACCTTGAAGGACTTTTAGGCAGTGGAAGGACATCACGATCAAGAGAAATTTGTGGAGTCATGCTGAATGAAATAAAAATTACTGATATATGGTTTTTGTAATGCTTGTTAGATTCACTATGAATATCTAGGGATTCTGGTTTCTTTTGTAGAAAAACCTGCTATGGGGGACCTTCTCTTTACTGAAATACTTCCTAAAATGGGAGAGTGTTTTCATTACCAACTATATTGATATTGATACCGCTTTGGAGTTTATAGTAATAGTCGTTTTGCAAATCATATGGATTTCTTTAGTGGCTTGTACCTGAGCTAAGCTGGGAGCCTGGGCAGTATTCAGAGCATGGGTCCTGGATGGAATGCTTGCATCAGTTTTCTAACGTTTGTTGGATTTTCCTACGTGGATAAGAAAGTTAACTTCATGCTTACATTATATCAGGCTTCAAGGACAAGAACAAATTACTATGAATCACGTTCAAAGGATGCTGATGATATTGATACTGGTGCTGTTAAAGTTTCCGAAGATTTCATTGTCTCTGATATTGCCATTCATCCAAGACATGCGAAGCAAATGAGACCACATCAGTTGGAAGGATTCAGCTTCCTGGTCAAGAATCTAGTCGGAGACAAACCTGGAGGTTGTATTCTAGCTCATGCTCCTGGTTCAGGGAAGACATTTATGCTCATAAGTTTCATTCAAAGCTTCTTAGCAAAGTATCCTTCTGCAAGGCCCCTCGTAGTGCTTCCGAAAGGGATTTTAGGTACTTGGAAGAGGGAGTTTCAGCGGTGGCAAGTGGAGGACATACTACTATATGATTTCTATTCTGTTAAGGCTGATAAAAGAACAGAGCAACTGGAAGTCCTCAAATCTTGGGAAGCCCGGATGAGCATACTATTTCTTGGATACAAGCAGTTCTCACGAATCATCTGTGGTGATGGAGATGGAAACATTGCAGCTGCGTGCCGGGACAGGCTGCTTATGGTCCCCAACCTACTTATACTAGACGAGGGTCATACACCAAGAAATCGGGAGACAGATGTACTGGCATCACTAAAAAGAGTCCAAACACCACGCAAAGTGGTCCTGTCTGGTACACTTTTCCAGAATCATGTTTCGGAAGTGTTTAACATCTTGGACCTCGTGCGCCCTAAGTTTCTCAAGATGGAATCATCCCGTCCTATCGCTAGACGTATAATGAGTCAGGTAGCAATATCAGGTATCAGGAGTTTAAAAGGGGTTCATGACAGTGCATTCACTGAGTCAGTAGAAGACACCCTGCTGAATGACGACAACTTCACTAGAAAGGCACATGTTATTAGAAGTCTTAGAGAATTAACAAAAGATGTGCTTCACTATTACAAGGGTGATATCTTAGATGAACTACCTGGCCTAGTGGATTTTAGTGTGTTCTTGAAACTCAGTACCAAGCAGAAAGAAATTGTTCACAAGATAGAAGCCTATGAAAAGTTCAAAAGAAGTGCGGTGGGGACTGCATTGTACATTCATCCCTGCCTGTCAGAAATTTCAGAGGGTGATGCTGCAGATAGGGCGACCAACTTGACAGATGCCACTGTTGACAGCTTGATTGAGTCTATCATCATTAAAGATGGGGTGAAAGCCAAGTTTTTCTTTAACATTCTGTCTCTTGCTAACTCTGCAGGAGAGAAGTTGCTTGCCTTCAGTCAATATATACTTCCCATGAAATTTTTGGAAAGGTTGTTGGTTAAGAGGCTGGGCTGGCATGTAGGGAAGGAGATTTTCATGATATCTGGTGATACTAGTGCAGACGACAGAGAAGTGGCGATGGATCAGTTTAACAACTCTGCCGATGCAAAAGTTTTGTTTGGTTCCATCAAGGCCTGTGGAGAGGGAATCTCCCTTGTTGGTGCATCGAGAGTCATCATTCTAGATGTTCATTTGAACCCATCTGTCACCCGTCAAGCAATTGGACGTGCATTCAGGCCCGGACAGCAGAAGAAAGTGTTTGTGTACAGGCTTGTTGCTGCTGATTCTCCAGAGGTGAAGTTCCATGAAACTGCGTTCAAGAAAGAAGTTATACCAAAGCTATGGTTTGAATGGAGTGAGCTCTGCACTACTGAAGACTTCAAACTGAATCAAGTTCATATTGATGACTCTGAAGATGAACTATTGGAGGCTAATGCTATTCGCCAGGATATCAAGGCTTTGTATAGAAGGTGAGCTATCTTTTTCTCCGTGTGCACATAATGCAAGTTAAACCCTGAAGGTGTTCTCTGTCTTATCCAAAATTGTCTTGTAGGTAACAAGCTGTATGTGGCTGCTGTATACCATGTACATAATGCAATGCTGATCTTTCTGGATGATCATTGCTGTGAAGTAAGGGGATTTCTCTTGAATCATTCTTCACATTACAAAATCTTTGCTCCTTATTCTGTTCTGATTGTATGACCATGATGCTTTTTCGTTAACCTATATCATTTTTCTTCCTACAGGGTGTGGCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024397