BGIOSGA024403

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Revision as of 06:12, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024403| Description = cDNA clone:J013099F14, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA024403, complete gene.| ta...")
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Gene Name

BGIOSGA024403

Description

cDNA clone:J013099F14, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA024403, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA024403-TA

Ensembl Protein ID

BGIOSGA024403-PA

Length

4145

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:12834458..12838602

Sequence Coding Region

12838495..12838602,12838301..12838403,12838044..12838218,12837835..12837879,12837428..12837694
,12837005..12837350,12836787..12836924,12836545..12836670,12836228..12836440
,12835850..12836141,12835561..12835757,12835129..12835479,12834458..12835042

Genome Context

<gbrowseImage1> name=IndicaChromosome07:12834458..12838602 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:12834458..12838602 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCCACGCCCATATGAGCTATGGCCGTGGTGGGGTCGACGTCAACGGTGTTCCGCAGCCATTCCAGCCCAACCCCAATGTTCCCCTCCTTACCGATGGGCAGATGGTTGATGACATCCCGCCGGAGCAGCATGCGCTTGTGCCATCTTTTATAGGCGGCGGGGGAAAGAGGATCCACCCGCTTCCTTATGCGGATCCCAATCTACCTGTTCAACCAAGATCTATGGACCCATCCAAGGATCTTGCTGCATACGGTTATGGTAGTGTTGCGTGGAAGGAGAGGATGGAGAGCTGGAAGCAGAAGCAGGAGAGGCTGCACCAGATGAGAAATGATGGTGGTGGTAAAGACTGGGATGGCGATGGTGATGATGGAGATCTACCACTGATTTTCTCCCCTGTAGAATTGCTTTATCACTTTGGCTGGACAAAAATGGATGAAGCTAGGCAGCCATTGTCCAGAAAAGTCCCAATTCCTTCAAGTCAGATTAACCCCTATAGAATGGTTATCATAATTCGGCTGGTGGTTTTGGGGTTTTTCTTCCACTATCGAGTGATGCATCCAGTGCCTGATGCTTTTGCCTTATGGTTGATATCTGTAATTTGTGAAATCTGGTTTGCCATGTCTTGGATTCTTGATCAATTCCCCAAGTGGTTTCCTATCGAGAGAGAGACTTACCTTGATCGATTGACATTGAGGTTTGACAAGGAAGGCCAAACATCTCAACTTGCACCAATCGATTTCTTTGTCAGTACTGTTGATCCCTTGAAGGAACCTCCTTTGGTCACAGCAAACACTGTTCTATCTATCCTCGCGGTAGATTATCCAGTTGATAAGGTTTCATGCTATGTCTCTGATGATGGTGCTGCAATGCTGACATTTGAAGCATTATCCGAAACATCTGAATTTGCAAAGAAATGGGTTCCTTTCTGCAAAAAGTACAGTATTGAACCACGTGCTCCAGAGTGGTACTTCCAACAGAAGATAGACTACCTGAAGGATAAGGTGGCACCATACTTTGTTAGGGAGAGGAGAGCAATGAAGAGAGAGTATGAGGAATTCAAGGTGAGAATCAATGCATTGGTTGCTAAAGCTCAGAAAGTTCCCGAGGAAGGTTGGACAATGCAAGATGGAACTCCCTGGCCTGGAAACAATGTTCGCGATCACCCTGGAATGATTCAGGTCTTCCTTGGCCAAAGTGGCGGCCATGACATCGAAGGTAATGAGCTACCTCGATTGGTGTATGTTTCAAGAGAAAAAAGGCCAGGCTATAACCATCACAAGAAGGCTGGTGCCATGAACGCATTGGTCCGAGTATCTGCTGTACTAACTAATGCTCCATACATGCTCAACTTGGATTGTGATCATTACATCAACAATAGCAAGGCTATAAAGGAAGCAATGTGTTTTATGATGGACCCTTTGGTTGGAAAGAAGGTTTGTTATGTGCAATTCCCTCAAAGGTTTGATGGGATTGATCGTCATGATCGATACGCCAACAGGAACGTGGTCTTCTTCGATATCAACATGAAAGGCTTGGATGGTATCCAAGGCCCCATCTATGTTGGTACTGGATGTGTCTTTAGAAGGCAGGCATTGTATGGTTATGATGCCCCCAAAACGAAGAAGCCTCCGTCGAGGACCTGCAACTGCTGGCCTAAATGGTGCATTTGCTGTTGCTGCTTTGGTGACAGGAAGAGCAAGAAGAAAACTACGAAACCTAAAACAGAGAAGAAGAAAAGATCTTTCTTCAAGAGAGCAGAAAATCAATCCCCTGCATATGCACTTGGTGAAATTGAGGAGGGTGCTCCAGGAGCTGAAAATGAAAAGGCTGGTATTGTAAATCAACAGAAGCTGGAAAAGAAATTTGGCCAATCTTCTGTTTTTGTCGCATCCACACTTCTTGAGAATGGTGGAACCTTGAAAAGTGCGAGTCCAGCATCTCTTCTAAAGGAAGCAATTCATGTCATAAGCTGTGGGTACGAAGATAAGACAGACTGGGGGAAAGAGATTGGCTGGATCTACGGATCAGTTACAGAAGATATTCTAACTGGTTTTAAGATGCACTGCCATGGTTGGCGGTCAATTTACTGCATACCTAAACTACCTGCATTCAAAGGTTCTGCACCACTCAATCTTTCTGATCGTCTTCACCAAGTTCTTCGGTGGGCTCTTGGGTCTGTTGAAATATTCTTCAGCAACCATTGCCCTCTTTGGTATGGATATGGTGGTGGACTAAAATGTTTGGAAAGATTTTCCTACATTAATTCCATCGTGTATCCTTTTACATCCATTCCACTCTTGGCTTACTGTACATTGCCAGCCATCTGTTTGCTAACTGGGAAGTTTATCACTCCAGAGCTTACGAATGTTGCCAGTCTCTGGTTCATGTCACTTTTTATCTGCATTTTTGCTACTGGCATCCTGGAAATGAGATGGAGTGGTGTTGGCATTGATGATTGGTGGAGAAATGAACAATTTTGGGTCATTGGAGGGGTCTCTTCGCACCTCTTTGCTTTGTTCCAGGGACTTTTGAAGGTCATAGCTGGTATAGATACGAGTTTCACTGTGACATCAAAAGGTGGGGACGATGAAGAGTTCTCAGAGCTATATACATTCAAATGGACTACCTTGCTGATACCTCCAACCACTCTACTCTTATTGAACTTCATTGGGGTTGTTGCTGGTGTTTCGAATGCAATCAATAACGGGTATGAATCATGGGGACCCCTCTTCGGGAAGCTCTTCTTTGCATTTTGGGTGATCGTCCATCTTTACCCATTCCTCAAAGGTTTGGTTGGAAGGCAAAACAGGACGCCAACAATTGTTATTGTCTGGTCCATTCTTCTGGCTTCAATCTTCTCACTCCTCTGGGTCCGGATTGATCCTTTCTTAGCAAAGAATGATGGTCCACTTCTGGAAGAGTGTGGTTTGGATTGCAACTAG</cdnaseq>

Protein Sequence

<aaseq>MLHAHMSYGRGGVDVNGVPQPFQPNPNVPLLTDGQMVDDIPPEQHALVPSFIGGGGKRIHPLPYADPNLPVQPRSMDPSKDLAAYGYGSVAWKERMESWKQKQERLHQMRNDGGGKDWDGDGDDGDLPLIFSPVELLYHFGWTKMDEARQPLSRKVPIPSSQINPYRMVIIIRLVVLGFFFHYRVMHPVPDAFALWLISVICEIWFAMSWILDQFPKWFPIERETYLDRLTLRFDKEGQTSQLAPIDFFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKYSIEPRAPEWYFQQKIDYLKDKVAPYFVRERRAMKREYEEFKVRINALVAKAQKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGQSGGHDIEGNELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPYMLNLDCDHYINNSKAIKEAMCFMMDPLVGKKVCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKTKKPPSRTCNCWPKWCICCCCFGDRKSKKKTTKPKTEKKKRSFFKRAENQSPAYALGEIEEGAPGAENEKAGIVNQQKLEKKFGQSSVFVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKLPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPFTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVIAGIDTSFTVTSKGGDDEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEECGLDCN</aaseq>

Gene Sequence

<dnaseqindica>1..108#200..302#385..559#724..768#909..1175#1253..1598#1679..1816#1933..2058#2163..2375#2462..2753#2846..3042#3124..3474#3561..4145#ATGCTCCACGCCCATATGAGCTATGGCCGTGGTGGGGTCGACGTCAACGGTGTTCCGCAGCCATTCCAGCCCAACCCCAATGTTCCCCTCCTTACCGATGGGCAGATGGTACTGTCGAAAATTTTGCGCAGCGGAATAGCCTGCTACTCTTGGCTCTTCGTAGCCGAGTACTCAATTGGTTGTTTCAATGTGCTTTCAGGTTGATGACATCCCGCCGGAGCAGCATGCGCTTGTGCCATCTTTTATAGGCGGCGGGGGAAAGAGGATCCACCCGCTTCCTTATGCGGATCCCAATCTACCTGGTGCGCACTTGAGTTATGATCAGCTATTTTTTTACTTGTGATGTTTTATGAATAGAATCAGCTAAAGGTAGTTGTGCTACAGTTCAACCAAGATCTATGGACCCATCCAAGGATCTTGCTGCATACGGTTATGGTAGTGTTGCGTGGAAGGAGAGGATGGAGAGCTGGAAGCAGAAGCAGGAGAGGCTGCACCAGATGAGAAATGATGGTGGTGGTAAAGACTGGGATGGCGATGGTGATGATGGAGATCTACCACTGTATGACTTTGGAAACTTTTTTGGCTTCTCTCTGATATTCTATTTCATTCCATATGTTAAGTCAAACTCGAGTGCTCCATTCTAGTGATAGGATATACTATCTACAGATAATATAAGTAAGACAAAATAATATATATTGATAAAACTGTCCAATTCATACATAGGATTTTCTCCCCTGTAGAATTGCTTTATCACTTTGGCTGGACAAAGTATGTGATTGCATGAATGCCAATTTTTTAAATATTTTCTAAGAATAACCGAAATGTATTCGTTTATTTGTATTTTTTAGTTCAAGAATTTTTCGTTTGGTACTGATCCGAATTACCAATTGTTAACTGATTTTTACCAGAATGGATGAAGCTAGGCAGCCATTGTCCAGAAAAGTCCCAATTCCTTCAAGTCAGATTAACCCCTATAGAATGGTTATCATAATTCGGCTGGTGGTTTTGGGGTTTTTCTTCCACTATCGAGTGATGCATCCAGTGCCTGATGCTTTTGCCTTATGGTTGATATCTGTAATTTGTGAAATCTGGTTTGCCATGTCTTGGATTCTTGATCAATTCCCCAAGTGGTTTCCTATCGAGAGAGAGACTTACCTTGATCGATTGACATTGAGGTTGGTTACTGTTACTAGCTAGGTATACTTGTTATCCATCATTCTGAATTACCAAGACTAATTGTTTGCTTTTATAGGTTTGACAAGGAAGGCCAAACATCTCAACTTGCACCAATCGATTTCTTTGTCAGTACTGTTGATCCCTTGAAGGAACCTCCTTTGGTCACAGCAAACACTGTTCTATCTATCCTCGCGGTAGATTATCCAGTTGATAAGGTTTCATGCTATGTCTCTGATGATGGTGCTGCAATGCTGACATTTGAAGCATTATCCGAAACATCTGAATTTGCAAAGAAATGGGTTCCTTTCTGCAAAAAGTACAGTATTGAACCACGTGCTCCAGAGTGGTACTTCCAACAGAAGATAGACTACCTGAAGGATAAGGTGGCACCATACTTTGTTAGGGAGAGGAGAGCAATGAAGGTGAATAATTGGGTCTTAAAAAAATTGCTATTTGTTTTGATTTTATAGTAACATTAATTAGGCCAAGCTTGTCTTTTCAGAGAGAGTATGAGGAATTCAAGGTGAGAATCAATGCATTGGTTGCTAAAGCTCAGAAAGTTCCCGAGGAAGGTTGGACAATGCAAGATGGAACTCCCTGGCCTGGAAACAATGTTCGCGATCACCCTGGAATGATTCAGGTATGTTCGGGTGATTTGTGATGGTGCACAGTATATATGCTGGCATTTTGATGGATCCCCTCTTTCCTATTCTTGAATTATGATGATAAAGAAGTTAAAACTTTCTCAATGAATAGGTCTTCCTTGGCCAAAGTGGCGGCCATGACATCGAAGGTAATGAGCTACCTCGATTGGTGTATGTTTCAAGAGAAAAAAGGCCAGGCTATAACCATCACAAGAAGGCTGGTGCCATGAACGCATTGGTAAAAGATAATTTCTTTGATGTTTTTTTGGCTTTCCATAACTTGTACTCCTGTATTAACAAAATATAGTGTATGTTTAATTTTTTTGCTTTGTTGATTCACAGGTCCGAGTATCTGCTGTACTAACTAATGCTCCATACATGCTCAACTTGGATTGTGATCATTACATCAACAATAGCAAGGCTATAAAGGAAGCAATGTGTTTTATGATGGACCCTTTGGTTGGAAAGAAGGTTTGTTATGTGCAATTCCCTCAAAGGTTTGATGGGATTGATCGTCATGATCGATACGCCAACAGGAACGTGGTCTTCTTCGATGTAAGATTTGCCCCATATTTCTGAGATACTCTCATACACAAGTTATTTAATTTTCTTGCAGTTTATCTAACATTTGCTTGTTACAGATCAACATGAAAGGCTTGGATGGTATCCAAGGCCCCATCTATGTTGGTACTGGATGTGTCTTTAGAAGGCAGGCATTGTATGGTTATGATGCCCCCAAAACGAAGAAGCCTCCGTCGAGGACCTGCAACTGCTGGCCTAAATGGTGCATTTGCTGTTGCTGCTTTGGTGACAGGAAGAGCAAGAAGAAAACTACGAAACCTAAAACAGAGAAGAAGAAAAGATCTTTCTTCAAGAGAGCAGAAAATCAATCCCCTGCATATGCACTTGGTGAAATTGAGGAGGGTGCTCCAGGTACGTGAACTTCTGAACTAAACATTGTGGGTGGTTTTTCCTGAAACACCTTTGTAGTAATAGCATATTTAATCCTTCAATATTTTTGGCAGGAGCTGAAAATGAAAAGGCTGGTATTGTAAATCAACAGAAGCTGGAAAAGAAATTTGGCCAATCTTCTGTTTTTGTCGCATCCACACTTCTTGAGAATGGTGGAACCTTGAAAAGTGCGAGTCCAGCATCTCTTCTAAAGGAAGCAATTCATGTCATAAGCTGTGGGTACGAAGATAAGACAGACTGGGGGAAAGAGGTAAGGACTGGAGCCTGATTGCTGTTAACTGGTTAATTGATTGAAACATTTCTTAACTAGTTAATTATATCTTTGTTGCAGATTGGCTGGATCTACGGATCAGTTACAGAAGATATTCTAACTGGTTTTAAGATGCACTGCCATGGTTGGCGGTCAATTTACTGCATACCTAAACTACCTGCATTCAAAGGTTCTGCACCACTCAATCTTTCTGATCGTCTTCACCAAGTTCTTCGGTGGGCTCTTGGGTCTGTTGAAATATTCTTCAGCAACCATTGCCCTCTTTGGTATGGATATGGTGGTGGACTAAAATGTTTGGAAAGATTTTCCTACATTAATTCCATCGTGTATCCTTTTACATCCATTCCACTCTTGGCTTACTGTACATTGCCAGCCATCTGTTTGCTAACTGGGAAGTTTATCACTCCAGAGGTAAATCTTATTCAACTTTCAGTTCTGTTCCGTATGCAGTTGCTGTGATTTGAGCCTTACATTTCCCTTCCTGTTCTGTTGTGCAGCTTACGAATGTTGCCAGTCTCTGGTTCATGTCACTTTTTATCTGCATTTTTGCTACTGGCATCCTGGAAATGAGATGGAGTGGTGTTGGCATTGATGATTGGTGGAGAAATGAACAATTTTGGGTCATTGGAGGGGTCTCTTCGCACCTCTTTGCTTTGTTCCAGGGACTTTTGAAGGTCATAGCTGGTATAGATACGAGTTTCACTGTGACATCAAAAGGTGGGGACGATGAAGAGTTCTCAGAGCTATATACATTCAAATGGACTACCTTGCTGATACCTCCAACCACTCTACTCTTATTGAACTTCATTGGGGTTGTTGCTGGTGTTTCGAATGCAATCAATAACGGGTATGAATCATGGGGACCCCTCTTCGGGAAGCTCTTCTTTGCATTTTGGGTGATCGTCCATCTTTACCCATTCCTCAAAGGTTTGGTTGGAAGGCAAAACAGGACGCCAACAATTGTTATTGTCTGGTCCATTCTTCTGGCTTCAATCTTCTCACTCCTCTGGGTCCGGATTGATCCTTTCTTAGCAAAGAATGATGGTCCACTTCTGGAAGAGTGTGGTTTGGATTGCAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024403

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA024403&oldid=49997"